GEISHA - A Chicken Embryo Gene Expression Database
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GNPDA1
glucosamine-6-phosphate deaminase 1

Gene
Official SymbolGNPDA1
Official Full Nameglucosamine-6-phosphate deaminase 1
CGNC ID5528
also known asglucosamine-6-phosphate isomerase 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001006156
PolypeptideNP_001006156
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.8913
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10007ENSG00000113552MIM:601798
Mouse26384ENSMUSG00000052102All phenotypic alleles (2):Targeted, other(1) Gene trapped(1) MGI:1347054
Xenopus100380029, 398943966375
Zebrafish550565ENSDARG00000037307ZDB-GENE-050417-417ZFIN:ZDB-GENE-050417-417
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene416341
Ensembl Gene
KEGGgga:416341
GEISHA IdGNPDA1.Anderson.2021Data SourceDirect Submission
Complete cDNA Template Probeshow
AAAGAAGCCAGTCTAAGAAGCCTGACAGTGATTAATCTCTCACTGTCTGGAGTAACGCTGAGCCATCTTTTTATGTTGA
AAACCAGCTGCAAAGAAAGGGAATGCTGCAGAAATTCATCTTGTCTTGTTCTTAAATTTGCAAACACCCGCTTTAACTA
ACCAAAGGAGGATGTGATCCACTGCGCCGTGTTCCACAGATCTCCAACGTATTCTCTGAAGGTAAAACCAGTAGAGAAT
TAGTTGTTTAAGCAAAGAAACAATTATACTTGTATAGACTGAAGGCACCAAAACAAATGTGAGAACACAATGGGTGATC
ACTTTGGAATGTATTCTTTGCAATTCTGTCAAACGCATTTGTGTATCACTGCCCATCTAGAAAATACTCCTAAGTTATA
CTCACATAAAATGGGAATGGCTCTTGTTCAGCCCGGAGAATGGAAAGTATCAGCACAACTTAACAGCAGCCTGCTTCAT
AACTATGAGTAAGCCATCTAGAAATAGAAACAAAGCGCTCCACTGCAGTGCACAGGGAGGAGAGATAAGAGACAGTGGG
GCACAAACTGAAACAAGATACTCATATTGGATATAATGAAAAAGTTTCCCTGTGAGGACAGTCCAGGCAGAGGAGATAG
TTACACAGAGGTGTGCAGCCTCAATCTGATAGAGGTTTTCAGGCTGAACCCGATGTTGGAGCCAGATGTAAGAAGAGCC
CommentsImages and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST950h2. Related paper: Anderson C, Khan MAF, Wong F, Solovieva T, Oliveira NMM, Baldock RA, Tickle C, Burt DW, Stern CD. A strategy to discover new organizers identifies a putative heart organizer. Nat Commun. 2016 7:12656. doi: 10.1038/ncomms12656. 
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 2
stage 3
Area Pellucida
Hypoblast
Primitive Streak
HH2+
HH3+
4-6
stage 4
stage 5
stage 6
Early Mesoderm
Epiblast
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Primitive Streak
HH5+
7-12
stage 8
stage 8
stage 9
stage 11
stage 12
Anterior Intestinal Portal
Anterior Neuropore
Ear/Otic Placode
Extraembryonic Mesoderm
Eye
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Somites
extraembryonic mesoderm
HH11-
HH8+
HH8-
13-18
stage 13
stage 13
stage 13
stage 13
stage 13
stage 13
stage 13
stage 13
stage 13
stage 14
Anterior Intestinal Portal
Dermomyotome
Ear/Otic Placode
Endoderm
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Mesencephalon
Midbrain
Myelencephalon
Neural Plate/Tube
Notochord
Pharynx
Sclerotome
Somites
Splanchnic Mesoderm
extraembryonic mesoderm
section 1
section 2
section 3
section 4
section 5
section 6
section 7
section 8
19-24
stage 20
stage 24
Blood Vessels
Gut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.8913

Mouse

EmageMGI:1347054
EurexpressMGI:1347054
MGI GXDMGI:1347054

Frog

Xenbase966375

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050417-417
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