GEISHA - A Chicken Embryo Gene Expression Database
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ADAMTS3
ADAM metallopeptidase with thrombospondin type 1 motif 3

Gene
Official SymbolADAMTS3
Official Full NameADAM metallopeptidase with thrombospondin type 1 motif 3
CGNC ID8835
also known asA disintegrin and metalloproteinase with thrombospondin motifs 3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_426316
PolypeptideXP_426316
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.12813
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9508ENSG00000156140MIM:605011
Mouse330119ENSMUSG00000043635All phenotypic alleles (2):Targeted, other(2) MGI:3045353
Xenopus100498276490471
Zebrafish568788ENSDARG00000060127ZDB-GENE-110223-1ZFIN:ZDB-GENE-110223-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428760
Ensembl GeneENSGALG00000011623
KEGGgga:428760

Entry 1

GEISHA IdADAMTS3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGGAGAATGTGTGAAAGTGGGTTG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAGCCAGGGATGGAACAGTAACGcDNA Template Length1082
Forward cDNA Template Probeshow
AGCACTTCATCTGGAAGAAGAAGATTTGTCTCCCATACAGGGGCTCATCATTACAGGGAGGGGAGTTTACAAACCCTCA
CTGATTCTGGCTTTTCTCCATCGCAATGGTCACCAGCGCGGCATATGATCTGCCGGGTCTCGGTTCCCTCCCCACAGGT
CACAGAACACTCAGACCAGGGCCCAGCTTTCCACTGTGCAGGGCATGGTACTCGGTTACACGGCCTGCGACTCTCAGGG
CGATCTCCACTACAGTACTTGAAATGGACAGAGCGGTTTGCACCATCATGAAGGGGCTGAATGCAACGCACAGTGCGGA
TCTGGTAGCCTGAATTCCCACAGGTTTTTGTGCAGTATTCCCACTCATCTGCTGCCCACAGAGGCCGTGTGCATTCCTG
AAGATTGCACATTCTACGAATGGGCTTTGGCTTTTTGCTGGCTTCACAGAAGCTGCGATGAACCATTTTGTTATCACTT
TTCCTGCGGCACCCATATTTCGTATATTGGAACCCTCCACCACAGGGTTTGGAGCACTGTGACCAACTTTTCAACGCCC
ACTCAAAAGTATCTATTTCCTCCTGTAGGACGTTGTTGCTGTTGATAGTTGGTACTGAATCTTCGTGAATGATGTATTT
GTAAGTCAGGCTAGATCTTGTGTCATTCTCCCGAGGAATGATCAGGACAACTACTGCATCATGCAAAGGCCCATCANTG
TGCANAGTTTCAATGTCGTCTTCTATATTGTATTCCCATTCCACACCCAGGTCGATGAAAGATCGGGATCTGGCCTCCT
CCCCTTTTCCATTCANAATATANTGTCCTGTANCCTGGTTCTTAATTGCAANAAAATGAGGANAANCCTCNTCTTCTTG
GATAAACACATGTCNAGCACCANGAGGGATGTCAAACATCTTAAGGTACCCNANCTTTTTGGGAANTGCGGNTAAAGGT
TCNTTTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5
Early Endoderm
Early Mesoderm
Notochord
Primitive Streak
 
7-12
stage 8
stage 8
stage 8
stage 9
stage 10
stage 10
stage 10
Amnion
Area Opaca
Blood Islands
Ectoderm
Endoderm
Forebrain
Lateral Plate Mesoderm
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Somites
extraembryonic ectoderm
extraembryonic endoderm
 
13-18
stage 13
stage 13
stage 14
Amnion
Blood Islands
Forebrain
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Myotome
Somites
Spinal Cord
Tail
 
19-24
stage 19
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
Forebrain
Heart
Hindbrain
Leg AER
Liver
Mesonephros
Nephric Ducts
Neural Plate/Tube
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Somatic Mesoderm
Spinal Ganglia and Nerves
Wing AER
Yolk Sack or Stalk
infundibulum
25
stage 25
stage 25
stage 25
stage 25
Allantois
Cranial PNS
Foregut
Hindgut
Leg AER
Leg Mesenchyme
Liver
Mesonephros
Nasal Placode/Nerve
Notochord
Pharyngeal Arches and Clefts
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Stomach
Wing AER
Wing Mesenchyme
 

Entry 2

GEISHA IdADAMTS3.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
TGAAACTGGTCACGTGCTGGGAATGGAGCACGATGGGCAAGGGAACAGATGTGGGGATGAGACAGCAATGGGGAGTGTT
ATGGCTCCCTTGGTGCAGGCTGCCTTTCATCGTTACCACTGGTCCAGATGCAGTGGCCAAGAACTCAAAAGATATATAC
ACTCTTATGACTGTCTTCTTGATGACCCTTTTGAACATGATTGGCCCAAGCTCCCTGAACTGCCAGGCATCAATTATTC
CATGGATGAACAGTGCCGCTTTGATTTTGGTGTTGGCTATAAAATGTGCACAGCGTTCCGAACCTTTGACCCATGCAAG
CAGTTGTGGTGTAGCCATCCAGATAACCCGTATTTCTGTAAGACTAAGAAAGGACCTCCACTCGATGGGACAGAATGTG
CCCCTGGAAAATGGTGCTACAAAGGCCACTGCATGTGGAAGAATGCTAACCAGCTGAAGCAGGATGGCAACTGGGGACC
CTGGACAAAATTTGGCTCCTGCTCACGAACCTGTGGAACTGGAGTTCGCTTCCGAACGCGCCAGTGCAACAATCCAATG
CCAATTAATGGAGGTGAAGACTGTGCTGGTGTCAATTTTGAGTTTCAACTCTGCAATACTGAAGAGTGTCCGAAGCACT
TTGAGGACTTCAGAGCACAGCAGTGTCAGCAACGCAATTCCCACTTTGAGTATCAGAACAGCAAACACCACTGGCTGCC
ATATGAACACCCTGACTCTAATAAGAGATGCCACCTGTACTGCCAATCCAAAGAAACAGGAGATGTTGCTTATATGAAA
CAATTGGCACATGATGGGACTCGCTGTTCATATAAAGATCCCTACAGCATTTGTGTTCGTGGAGAATGTGTGAAAGTGG
GTTGTGACAAGGAAATTGGTTCCAATAAGGCTGAAGATAAGTGTGGTGTCTGTGGTGGAGATAACTCCCATTGCCGAAC
TGTGAAAGGAACCTTTACCCGCACTCCCAAAAAGCTTGGTAGGAATAGCAAATTCATGCATCTGAATATAGTTTCTATT
ATCTCACATGTTTCTGTCATGCTTATTGTTTTTGAAGACTGATCAGAAACGTGGCTTACTTCCAGGTAGCAAAACAAAA
ATTTTAGCTTGATGTGCCAGAATAGTTTGGTGCTTGATAAAGAAGTGAGATCCTTTAAAACACTGTAATGTTTCTGTCT
TTTGAAGGACCTATTAGGAGAAAACTCGATTTGTGCAGTGTATCCAGAAATACTCCCCAGGCAGAGCACGTTTAGTTCT
TTGTAAATGTTGAAGCCCACAGACAGTGTTTGTGCTAAACGGGGATACACTGAGTTCTGCC
CommentsImages Provided by Claire Anderson; Related article: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
stage 12
stage 12
Amnion
Blood Islands
Endoderm
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Somites
Left Pacemaker
Left Pacemaker

Entry 3

GEISHA IdADAMTS3.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
TAAAACTGGTCACGTGCTGGGAATGGAGCACGATGGGCAAGGGAACAGATGTGGGGATGAGACAGCAATGGGGAGTGTT
ATGGCTCCCTTGGTGCAGGCTGCCTTTCATCGTTACCACTGGTCCAGATGCAGTGGCCAAGAACTCAAAAGATATATAC
ACTCTTATGACTGTCTTCTTGATGACCCTTTTGAACATGATTGGCCCAAGCTCCCTGAACTGCCAGGCATCAATTATTC
CATGGATGAACAGTGCCGCTTTGATTTTGGTGTTGGCTATAAAATGTGCACAGCGTTCCGAACCTTTGACCCATGCAAG
CAGTTGTGGTGTAGCCATCCAGATAACCCGTATTTCTGTAAGACTAAGAAAGGACCTCCACTCGATGGGACAGAATGTG
CCCCTGGAAAATGGTGCTACAAAGGCCACTGCATGTGGAAGAATGCTAACCAGCTGAAGCAGGATGGCAACTGGGGACC
CTGGACAAAATTTGGCTCCTGCTCACGAACCTGTGGAACTGGAGTTCGCTTCCGAACGCGCCAGTGCAACAATCCAATG
CCAATTAATGGAGGTGAAGACTGTGCTGGTGTCAATTTTGAGTTTCAACTCTGCAATACTGAAGAGTGTCCGAAGCACT
TTGAGGACTTCAGAGCACAGCAGTGTCAGCAACGCAATTCCCACTTTGAGTATCAGAACAGCAAACACCACTGGCTTGC
CATATGAACACCCTGACTCTAATAGAGATGCCACCTGTACTGGCAATCCAAAGAACAGGAGAATGTTGCTTATATGAAA
CAATGGGCACATTGATGGGACTCGCTGTCCATATAAAGAT
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Andersonet al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Heart
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.12813

Mouse

Emage
EurexpressMGI:3045353
MGI GXDMGI:3045353

Frog

Xenbase490471

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-110223-1
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