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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ANGPTL1
angiopoietin like 1

Gene

Official Symbol	ANGPTL1
Official Full Name	angiopoietin like 1
CGNC ID	3154
also known as	angiopoietin-related protein 1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001277665
Polypeptide	NP_001264594
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.55721

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	9068	ENSG00000116194		MIM:603874
Mouse	72713	ENSMUSG00000033544	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:1919963
Xenopus	100170184			482122
Zebrafish	544656, 334311	ENSDARG00000012071	ZDB-GENE-040724-269, ZDB-GENE-030131-6243	ZFIN:ZDB-GENE-040724-269, ZFIN:ZDB-GENE-030131-6243

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	770850
Ensembl Gene
KEGG	gga:770850

Entry 1

GEISHA Id	ANGPTL1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	CCTTGGGTATGCTGTTGTTCCTAC
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGGTGTCCTGCCGTGAGAAGATTC	cDNA Template Length	601
Forward cDNA Template Probe	show AGCACTGCTCTTCAGCAGGGGAGATGGATCACAGACTGGATTATTTACAAGGGTCAGTCAGGTGCTGCATATTTTACTT CAAGCTCCCTTGTATTTTGTTGCCATCTTCAACATTTCTGTTGTTACATTGAGGACTTTATTTTCCAGTTGGGAAAGTT CAAGTGAGTTATCGCGCTTTCGGATTATCTCATGCAAGAGTTGCATATAGAGTTGAGTGACCCGAGAGTTCATGTTACG GCTTTCTTTCCTCAGCAACTTTACTTCATTCACAATGTTTCCATCCACGTCTACCACCAACTGCAAGATGTCAATCTCA CGTTTTTGCTTGGACAGCACATCCTTCAAGTTCTCTATGTCCATTCTTGTGACTTCATCTTTTCTGTTACCAGTACCTG GTTCGTTATTCACACAGATTGGCCCTGTGATTTTTTGTTCTGGGACCAAGAAGGTGTAACCACATTTCCTCCCTTCCTC TCCACCATCTGTGGAACGAGGATGTCTCCGTTGGGATGTTTTGTTGAGGGTCGATGGTTCTGTACAGCGCCCGATAGAC AACAGTAGGAACAACAGCATAACCC

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 7

stage 10

stage 11

Neural Plate/Tube
Somites
Unlabeled

13-18

stage 15

stage 16

Dermomyotome
Neural Plate/Tube
Sclerotome
Somatic Mesoderm

trapping

19-24

stage 21

stage 23

Ear/Otic Placode
Foregut
Head Mesenchyme
Lateral Plate Mesoderm
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme

trachea

stage 25

Ear/Otic Placode
Foregut
Lateral Plate Mesoderm
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Wing Mesenchyme

trachea

Entry 2

GEISHA Id	ANGPTL1.Niki.2009	Data Source	Publication
Complete cDNA Template Probe	show GGAATCTGGGTCAGCTGTGGCTGCTTAGTGCACTTCTGCATGGGAGAGTACAACGCCACAGCTTCAAAAAAACAAAAAC ATTGCTCCCTCCCCTCCCTCTGGAGTAAAACATACTGAAACTTTTTCTTCAGTTGTATTTAAATGATTTAAATAGGTTG GTTATCGCATGGAGAAACCCAACTCCCCAGCGCAGCCTGGATCTAACAGAGAAAGACAAAAGCAGTTTTCAACTCCAAC TGCAGCTTAACAATCTACAACATCAGGAAACACAGAAAGAAAAGGCAACTTGGCCTCCGGATCCACCAACTACGACAGA AGCAAACCAGCTGCAACATTCCTTCTTCTTGTCTCTTCTAAGTTCTCACACTTCCTTCAAAATGAAGATACTGAAATGG ACCTTGGGTATGCTGTTGTTCCTACTGTTGTCTATCGGGCGCTGTACAGAACCATCGACCCTCAACAAAACATCCCAAC GGAGACATCCTCGTTCCACAGATGGTGGAGAGGAAGGGAGGAAATGTGGTTACACCTTCTTGGTCCCAGAACAAAAAAT CACAGGGCCAATCTGTGTGAATAACGAACCAGGTACTGGTAACAGAAAAGATGAAGTCACAAGAATGGACATAGAGAAC TTGAAGGATGTGCTGTCCAAGCAAAAACGTGAGATTGACATCTTGCAGTTGGTGGTAGACGTGGATGGAAACATTGTGA ATGAAGTAAAGTTGCTGAGGAAAGAAAGCCGTAACATGAACTCTCGGGTCACTCAACTCTATATGCAACTCTTGCATGA GATAATCCGAAAGCGCGATAACTCACTTGAACTTTCCCAACTGGAAAATAAAGTCCTCAATGTAACAACAGAAATGTTG AAGATGGCAACAAAATACAAGGAGCTTGAAGTAAAATATGCAGCACTGACTGACCTTGTAAATAATCAGTCTGTGATCA TCTCCCTGCTGGAAGAGCAGTGCTTGAGAATCTTCTCACGGCAGGACACCCATGGGTCCCCGCCGCTTGTCCAAGTGGT GCCGCAGCACATTCCCAACAGTCAGCCTTATACTCCCGTTCTCCTGGGAGGCAATGAGATACAGAGAGACCCAGGGTAC CCCAGAGACAGGGATGTAAGGCCACCACCTGACCCAGCTACTTCTCCTACGAAGAGTCCCTTCAGAGTTCCACCACTGG CGTTAATTAACGAAGGTCCGTTCAAAGACTGCCAACACGCCAAAGACGCTGGGTATTCCAACAGTGGGATTTATATGAT CAAAGCCGAAAACAGCAATGAACCAATGCAGCTATGGTGTGAGAACAGCTTAGACCCCGGAGGATGGGCAGTTATTCAG AAGAGAACAGATGGATCTGTCAACTTTTTCAGGAACTGGGACAGTTACAAGAAAGGATTTGGAAACATTGATGGAGAGT ACTGGCTGGGACTAGAAAATATTTACATGCTTACCAATCAGGATAATTACAGACTACTGATTGAATTAGAGGACTGGAG CAACAAGAAAGTCTATGCAGAATACAGCAGTTTCCGTCTGGAGCCCGAAAATGAATTCTACAGGCTACGCTTAGGAACA TACCAAGGAAACGCAGGCGATTCCATGATATGGCACAACGGAAAGCAATTTACAACACTGGACAGAGACAGAGATATGT ATTCAGGAAACTGTGCTCATTTCCACAAAGGGGGCTGGTGGTACAACGCGTGCGCACACTCCAATCTGAACGGGGTGTG GTACAGAGGAGGCCACTACAGGAGCAAGTACCAGGATGGAATATTTTGGGCTGAGTACCGGGGAGGTTCCTACTCCTTG AAAGCAGTTCAAATGATGATCAGACCTATAGACTGAGGAGGAAAAGTCCGCAGTGCTCAAGCCAGCAAGCATAAACTTA CTGGTGCTTGAGTTACAGAAAAATAAAATGTTACTTTCAAATCATTATTTTGCACAATCTGTCCCTGCAAAATGCAGGT CTTCTATTTTCCTTTCTTCCCAGTTGCCCCTTGCCTTTTTTTTTTTTTTTAATTAAAGGAACCTTTTCTACTGTAACAG TGTTTTGTAAACACACATTCAA
Citation	Niki D, Katsu K, Yokouchi Y., Ontogeny of angiopoietin-like protein 1, 2, 3, 4, 5, and 7 genes during chick embryonic development. Dev Growth Differ. 2009 Dec;51(9):821-32.
Copyright	Copyright © 19992012 John Wiley & Sons, Inc. All Rights Reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # XM_001233149.2)