Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

NCOA2
nuclear receptor coactivator 2

Gene

Official Symbol	NCOA2
Official Full Name	nuclear receptor coactivator 2
CGNC ID	11634
also known as	nuclear receptor coactivator 2, NCOA2
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_001231577
Polypeptide	XP_001231578
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.9808

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	10499	ENSG00000140396		MIM:601993
Mouse	17978	ENSMUSG00000005886	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3)	MGI:1276533
Xenopus	100216190, 394405			482310
Zebrafish	81884	ENSDARG00000017929	ZDB-GENE-010406-3	ZFIN:ZDB-GENE-010406-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	420176
Ensembl Gene
KEGG	gga:420176

Entry 1

GEISHA Id	ChEST752c24	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show AAAAGAACAAGAAAAAGCAGCAGCAGCTAATGAAGATGAAGTGCAAAAAGCAGATGTGTCATCTACGGGTCAGAGTGTC ATCGACAAGGATGCGCTTGGACCAATGATGCTTGAGGCCCTGGATGGGTTCTTCTTTGTAGTGAACCCAGAAGGTAATG TTGTGTTTGTTTCGGAGAATGTGACGCAGTACTTAAGGTACAACCAAGAAGAGCTGATGAACACAAGCATATATAGCAT CCTGCACGTAGGGGACCACAATGAATTTGTTAAAATCCTGCTGCCCAAATCTTTAGTGAATGGGGGATCTTGGTCTGGT GACACTCCTAGGCGTAATAGCCATACCTTCAACTGTCGGATGCTCGTAAAACCGCTTGCTGATTCTGAAGAAGGCCATG ATAATCAGGAAGCACATCAGAAATATGAAACTATGCAGTGCTTTGCTGTTTCTCAACCAAATTCCTTCAAGGAGGACGG TGAAGATTTGCAGTCTTGCTTGATTTGTGTTGCAAGAAGAGCTCCAATGAAGGAAAGGCCACTTCTTCCTTCATCAGAG AGCTTTACTACTCGCCAGGATCTACAGGGCAAAATAACTTCACTGGATACCAGTAGCATGCGAGCAGCTATGAAACCTG GCTGGGAAGATTTGGTGAGAAGATGTATTCAGAGGTTCCATTCGCAGCATGAGGGAGAAATATCTTTTGCCAAAAGGCA TCACCAGGAAGTGCTGAGGCAGGGACTAGCATTTAGTCCTGTTTACCGGTTTTCCTTGTCGGATGGCACTATAGTTTCT GCCCAAACGAAGAGCAAACTCATCCGTTCCCAGACTACTAGTGAACCTCAGCTTGTCATCTCCTTGCATATGCTTCACA GAGAGCAGAATGTCTGTGGAATGAATCAGGATTTGACTGGACAAGG
Comments	No specific expression detected at stages 4-25.

no images

Entry 2

GEISHA Id	NCOA2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GTGTTTGTTTCGGAGAATGTGACG
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGTGTCTGGCTTTTTCCATCGTG	cDNA Template Length	1503
Forward cDNA Template Probe	show CCCGCCAATTCCGTCACTATCTGGCATCAGTCCCCGCCACTAATACCGAAGGCACGCTGCTCTCACTGTTTTCTTTCTG TTCTCCTGAATGGCACCTGCTCTCTGTTTGTCCAGTTGTACCTTCAGATTGCTCCCCATACAGTCCAAAGCAGTCTTTT GAGTCCAGGCTTCCCATCTTGCTTAGCTGGGGAGGGTTCATATTCACAGGGGAATTTTGTAAATTTCCCATTTTTAGGT CAGGTGAATCCAACGACGATCCTAGAGAAACTCCATGGCCCTCACTGAGGGCCTGAAGGGCATTCACGGAACTGTTGGT GTAATTATGGCTATTTCCTGTGCTGCTGCAAACTCCCACCGGTGAATGCAAGCTTCCTGCAGGGGAGAACTGACTAAGT GGGATTCTAGGACTGCCTGCCACTCCAGGGCTCACGCAATGCCTTGGGGAAAACATAGAGATTGGATGCCCTGGGTTCA TGCCGGGGCTGCTTTGAGAGGGGCTATTCATTTTTAGTGCATATTTACTACCCTGAGGAGTGGATGCTTGAATACTTGA CACCTGGTTCATTCCCCCTGAACCACCAAATCTGCCCTGCTGGCGTGCCCATTTGTTCCTTTGGGCCCTTTATGGCGAA ATTCATATTGCTACTGCTGGTCATATCCTGACCTGGGTTCCCACAGAACATGAACCTGAGGGGCAGGGATGCTGGAGCT AATTGGGGTGCATATCTTTCCCATTCCTTGTCCAGTCAAATCCTCATTCCTTCCCCACACATTCTGCTCTTTGTGGAGC AAATGCAGGGAGAGGACCACCTCACGTTCACTATTTTTTTGTGAACGGATGAGTTTGCTCTTCGTTTGTGCCAAACCCA ATAATGCTATTGGACCAGGGAAAAGAAAAAAA

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Area Pellucida
Early Mesoderm
Epiblast
Neural Plate/Tube
Primitive Streak

7-12

stage 7

stage 8

stage 11

Anterior Intestinal Portal
Area Pellucida
Blood Islands
Head Mesenchyme
Headfold
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites

HH stage 6+ to 7-.

13-18

stage 13

stage 17

stage 18

Blood Islands
Head Mesenchyme
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
Widespread Expression

19-24

stage 20

stage 21

Widespread Expression

stage 25

Widespread Expression

Entry 3

GEISHA Id	NCOA2.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show TTTGGTGGTTCAGGGGGAATGAACCATGTGTCAAGCATCCAAGCATCCACTCCTCAGGGTAGTAACTATGCACTAAAAA TGAATAGCCCCTCTCAAAGCAGCCCCGGCATGAACCCAGGGCAGCCAAACTCTATGCTTTCCCCAAGGCATCGCGTGAG CCCTGGAGTGGCAGGCAGTCCTCGAATCCCACCTAGTCAGTTCTCCCCTGCAGGAAGCTTGCATTCACCCGTGGGAGTT TGCAGCAGCACAGGAAATAGCCATAACTACACCAACAGTTCCCTGAATGCCCTTCAGGCCCTCAGTGAGGGCCATGGAG TTTCTCTAGGATCGTCGTTGGCTTCACCTGACCTAAAAATGGGAAATTTACAAAATTCCCCTGTGAATATGAACCCTCC CCAGCTAAGCAAGATGGGAAGCCTGGACTCTAAAGACTGCTTTGGACTCTATGGGGAGCAATCAGAAGGTACAACTGGA CAAACAGAGAGCAGCTGCCATTCAGGAGAACAGAAAGATAACAGTGAGAGCAGCGTGCCATCGGTAGTGAGTGGCGAGA GACCTGATGGACAGAATAAGCTGCACGATGGAAAAAGCCAGACAAAGCTCTTACAGTTGCTGACCACCAAATCGGATCA GATGGAGCCTTCGCCTTTGTCCAGTACCATGGGAGATATCAGCAAGGACTCCACAGGAGGGTTGACTGGGTCTGGTTCA GCACATGGAACCTCACTCAAGGAGAAGCATAAAAATTTTGCACAGACTATTGCAGGACAGTAGTTCTCCTGTAGATTTG GGCAAGCTCACAGCAGAGGGCCACAGGAAAAGAACTGAACCAGGAGTCCAGTAGCACAGTCC
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023.