GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

EPCAM
epithelial cell adhesion molecule

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolEPCAM
Official Full Nameepithelial cell adhesion molecule
CGNC ID6812
also known asTACSTD1, epithelial cell adhesion molecule|ep-CAM|tumor-associated calcium signal transducer 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001012564
PolypeptideNP_001012582
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9136
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4072ENSG00000119888MIM:613244MIM:185535
Mouse17075ENSMUSG00000045394All phenotypic alleles (1):Gene trapped(1) MGI:106653
Xenopus496567, 379260, 446810986666
Zebrafish336480, 550255, 406454ENSDARG00000040534ZDB-GENE-030131-8424, ZDB-GENE-050417-57, ZDB-GENE-040426-2209ZFIN:ZDB-GENE-030131-8424, ZFIN:ZDB-GENE-050417-57, ZFIN:ZDB-GENE-040426-2209
Gene Ontology
Molecular Function
Biological Process
Cellular Componentintegral component of membrane
Links to other databases
Entrez Gene421292
Ensembl GeneENSGALG00000008969
KEGGgga:421292
GEISHA IdEPCAM.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCTGAAATGGCAAACACGAAATCG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAAGCAAGCACAACTGACTCCCCcDNA Template Length841
Forward cDNA Template Probeshow
AAAGANCTTTCAGGAGTTAAGATCCATGCCTCCCGGTGGTTTCCGGTCATCATCTTCTCTGAATCACACTCTGTCTTCA
GCTGATTTCAGTTATGCGTTCAGTCCTCTATGCATTTCATTCATTTCTTTCATCTCTGCTTTCACGTACTTCCCTTTCC
TCCTTCTTGAGAGGACCAGACCAATAATTCCAGCAACTATTGCTAGTACTACGATAACAATGACAGCAATAACACCAGC
AGTCAGGGACTTCATGGAAAACTCTGGTGGTACTTCATCAACGTAGTAGACCATCATGTTGTCAAACTTCAGCTCTTCG
TTATCGATATTCATGTTTAGCTTGTTGTTAAGAAAGATGGAGTCATCTTTTACATCTTTTTCAAAGTAGTAGGCCACAT
CAGTTATATCCACATCTCCAGGGGTTTTGTCTGAGGAATTTTGCTTCAAATCAATAGTAATAGTGGGGTTTTCATACAC
AACACCACTTATATAGCGTCCATCCAACATGTAACGACTGGTAATTGTATCCTTAAGATATCTTGTTAAAGACTCAGCG
TTCAGAGGAGTTTTTCTCTCAGCATGCCTCATTTCAATGATGATCCACGTCGTCCTGACTAATTGATTGCATTTCAAGT
CTGTGTCATGCTTGTCAGTTCTCCTAACACCAGCCGTGTTCACACACCAACAGGTGGTTCCATTGCACTGCTTTGCCTT
GAAGAGACCATTATTTTCACATTCAGGATCGTAAAGACCATCGGTATCCTGAAGCGCATCTTTGGGTTTCTCACGGCGG
CCCGATTTCGTGTTTGCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Epiblast
 
4-6
stage 4
stage 4
stage 4
stage 5
stage 6
stage 6
Area Opaca
Ectoderm
Endoderm
Epiblast
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Primitive Streak
 
7-12
stage 7
stage 7
stage 7
stage 9
stage 9
stage 9
stage 10
stage 10
stage 10
stage 10
stage 10
stage 10
stage 11
stage 11
stage 11
stage 11
Ear/Otic Placode
Ectoderm
Endoderm
Extraembryonic
Head Mesenchyme
Headfold
Lateral Plate Mesoderm
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Sclerotome
Surface Ectoderm
Widespread Expression
anterior
posterior
twins
13-18
stage 15
stage 15
stage 16
stage 16
stage 16
stage 16
Ear/Otic Placode
Endoderm
Extraembryonic
Eye
Foregut
Lateral Plate Mesoderm
Nasal Placode/Nerve
Nephric Ducts
Notochord
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Surface Ectoderm
Tail
Widespread Expression
 
19-24
stage 19
stage 19
stage 19
stage 19
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
stage 23
stage 23
stage 23
Allantois
Ear/Otic Placode
Ectoderm
Eye
Forebrain
Foregut
Germ Cells/PGCs
Gonad
Gut
Hindbrain
Leg AER
Leg Ectoderm
Liver
Lung
Midbrain
Nasal Placode/Nerve
Nephric Ducts
Oral Pharynx
Pharyngeal Arches and Clefts
Proepicardium
Renal
Spinal Cord
Spinal Ganglia and Nerves
Stomach
Wing AER
Wing Ectoderm
 
25-27
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 27
Allantois
Cranial PNS
Duodenum
Ear/Otic Placode
Ectoderm
Esophagus
Eye
Forebrain
Foregut
Gizzard
Hindbrain
Hindgut
Leg Mesenchyme
Liver
Lung
Mesonephros
Midbrain
Midgut
Nasal Placode/Nerve
Oral Pharynx
Pancreas
Pharyngeal Arches and Clefts
Pharynx
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Stomach
Tail
Wing Mesenchyme
dorsal and ventral pancreas, gall bladder
lumen of esophagus and trachea
lumen of intestine
trachea split into bronchi
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9136

Mouse

EmageMGI:106653
EurexpressMGI:106653
MGI GXDMGI:106653

Frog

Xenbase986666

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-8424, ZDB-GENE-050417-57, ZDB-GENE-040426-2209
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona