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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ANXA1
annexin A1

Gene

Official Symbol	ANXA1
Official Full Name	annexin A1
CGNC ID	11272
also known as	Anx1, annexin A1\|annexin I\|annexin-1\|calcium-dependent membrane binding protein annexin I\|calpactin II\|calpactin-2\|chromobindin-9\|lipocortin I\|p35\|phospholipase A2 inhibitory protein
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_206906
Polypeptide	NP_996789

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	301	ENSG00000135046		MIM:151690
Mouse	16952	ENSMUSG00000024659	All phenotypic alleles (3):Targeted, other(3)	MGI:96819
Xenopus	394995, 398427			977622
Zebrafish	334724, 353358	ENSDARG00000026726, ENSDARG00000014594	ZDB-GENE-030131-6664, ZDB-GENE-030131-5274, ZDB-GENE-030131-6554	ZFIN:ZDB-GENE-030131-6664, ZFIN:ZDB-GENE-030131-5274, ZFIN:ZDB-GENE-030131-6554

Gene Ontology

Molecular Function	calcium ion binding, calcium-dependent phospholipid binding, phospholipase A2 inhibitor activity
Biological Process
Cellular Component	basolateral plasma membrane, cilium, cytoplasm, nucleus

Links to other databases

Entrez Gene	404271
Ensembl Gene	ENSGALG00000015148
KEGG	gga:404271

Entry 1

GEISHA Id	ANXA1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GTGCTGAAAAGCCACTTGGAAG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGCCACATAAAGCGACCAGGATGG	cDNA Template Length	737
Forward cDNA Template Probe	show TTCATAATCCCCCTTTGGAGTTCATCCATAATTGCTTGGCGAAGAGATATACCATACAGACTCTTATAATAAGCTTTGA TCTCATTCAAGTCTATTTCATGGCGTGATACCATGATTCTGATGAGCTGTTTGTGTCGTGTTCCACTCCCCTTCATTGC CAGGTGGAGTTTTTCAGCAAAGAAAGCTGGCTTGCTTGTGGCGCACTTCACAAGGGCAGTCAGGCAGTTTTCAATATCA CCTTTCAGCTCCAAATCAAGTACTTTGTTCATGTCATGCTTGCTGTATTTAGCATACTTCTGAAAGACCCTTCGAAGAT GAGGGTAGCTTCTTGAAGTAAGAATAGTAATAAACACGTTAACATCCGTCCCTTTCCTTTTCTCTCCTGCTTCATATAA GGCCCTTGCATCATTGTCAGCAAGATCATCATTCACATGAGGATCTTCACATCGGTCACCCTTGGCTAGAATAACCAAA GCCTTTTGAAAGTCTCCAGACGTGTCAGAAATTATATCTTGTGTCAGATCTTTCTTCAGTACTTCTCTGTAGTATCTAC TGGCTTCTCTGATTTCTCTGTTGTTTCTTGATGCCAGAATCTCAATTAAAGTATCTTCATCAGTTCCAAGCCCCTTCAT AGAG

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 6

Germinal Crescent

7-12

stage 7

stage 10

Anterior Intestinal Portal
Area Opaca
Blood Vessels
Endoderm
Foregut

19-24

stage 19

stage 21

Allantois
Aorta
Arteries
Blood Vessels
Endoderm
Extraembryonic Blood Vessels
Eye
Gut
Hindgut
Mesonephros
Midgut
Nasal Placode/Nerve
Oral Pharynx
Pharyngeal Arches and Clefts
Pharynx
Renal
Yolk Sack or Stalk

Dorsal mesentery, genital ridge
cloaca
dorsal mesentery, nephrogenous mesenchyme

25-26

stage 26

Atria
Head Mesenchyme
Mesonephros
Nasal Placode/Nerve
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome

Entry 2

GEISHA Id	ANXA1.Anderson.2020	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show TAAACAACAGAGAAATCAGAGAAGCCAGTAGATACTACAGAGAAGTACTGAAGAGAGATCTGACACAAGATATAATTTC TGACACGTCTGGAGACTTTCAAAAGGCTTTGGTTATTCTAGCCAAGGGTGACCGATGTGAAGATCCTCATGTGAATGAT GATCTTGCTGACAATGATGCAAGGGCCTTATATGAAGCAGGAGAGAAAAGGAAAGGGACGGATGTTAACGTGTTTATTA CTATTCTTACTTCAAGAAGCTACCCTCATCTTCGAAGGGTCTTTCAGAAGTATGCTAAATACAGCAAGCATGACATGAA CAAAGTACTTGATTTGGAGCTGAAAGGTGATATTGAAAACTGCCTGACTGCCCTTGTGAAGTGCGCCACAAGCAAGCCA GCTTTCTTTGCTGAAAAACTCCACCTGGCAATGAAGGGGAGTGGAACACGACACAAACAGCTCATCAGAATCATGGTAT CACGCCATGAAATAGACTTGAATGAGATCAAAGCTTATTATAAGAGTCTGTATGGTATATCTCTTCGCCAAGCAATTAT GGATGAACTCAAAGGGGATTATGAAACCATCCTGGTCGCTTTATGTGGAAGCGATAAATAAGTATCTTGTTCTCCTGAT GCACCCAAGCCCTGTTGCTGAAGGTGCTTATATTAGCCTCAGCTGTCTATATAAAATACAGGCTTCACACACTGAGATT TCTTTGTAACTGTACTTAGTATACAACTTTATGTAGAAAACCTGGAACTTGGAATGTATTTTCTCAATACCTGTATTCT GTATGCCTGTATTCTGTATGGAATGAATATATCTTTTATCACTATTCATCTAAAGTCAACAAATGCCATTAGTTCTAAT TGCTTATTAATCATGCAACTTATCCAAGTTTCATCTAATAAAATCAAACTAGCTTTAAAAAATTAGATTACCTCTGGTT AACAA
Comments	Images Provided by Claire Anderson; Related article: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Anterior/Second Heart Field
Blood Vessels
Ectoderm
Endoderm
Extraembryonic Blood Vessels
Foregut
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Pharynx
Somatic Mesoderm
Splanchnic Mesoderm
extraembryonic ectoderm

Rostral Dorsal Mesocardium
section 24 dorsal mesocardium
section 48
section 60

Entry 3

GEISHA Id	ANXA1.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show TAAACAACAGAGAAATCAGAGAAGCCAGTAGATACTACAGAGAAGTACTGAAGAGAGATCTGACACAAGATATAATTTC TGACACGTCTGGAGACTTTCAAAAGGCTTTGGTTATTCTAGCCAAGGGTGACCGATGTGAAGATCCTCATGTGAATGAT GATCTTGCTGACAATGATGCAAGGGCCTTATATGAAGCAGGAGAGAAAAGGAAAGGGACGGATGTTAACGTGTTTATTA CTATTCTTACTTCAAGAAGCTACCCTCATCTTCGAAGGGTCTTTCAGAAGTATGCTAAATACAGCAAGCATGACATGAA CAAAGTACTTGATTTGGAGCTGAAAGGTGATATTGAAAACTGCCTGACTGCCCTTGTGAAGTGCGCCACAAGCAAGCCA GCTTTCTTTGCTGAAAAACTCCACCTGGCAATGAAGGGGAGTGGAACACGACACAAACAGCTCATCAGAATCATGGTAT CACGCCATGAAATAGACTTGAATGAGATCAAAGCTTATTATAAGAGTCTGTATGGTATATCTCTTCGCCAAGCAATTAT GGATGAACTCAAAGGGGATTATGAAACCATCCTGGTCGCTTTATGTGGAAGCGATAAATAAGTATCTTGTTCTCCTGAT GCACCCAAGCCCTGTTGCTGAAGGTGCTTATATTAGCCTCAGCTGTCTATATAAAATACAGGCTTCACACACTGAGATT TCTTTGTAACTGTACTTAGTATACAACTTTATGTAGAAAACCTGGAACTTGGAATGTATTTTCTCAATACCTGTATTCT GTATGCCTGTATTCTGTATGGAATGAATATATCTTTTATCACTATTCATCTAAAGTCAACAAATGCCATTAGTTCTAAT TGCTTATTAATCATGCAACTTATCCAAGTTTCATCTAATAAAATCAAACTAGCTTTAAAAAATTAGATTACCTCTGGTT AACAA
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.