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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CXCR5
C-X-C motif chemokine receptor 5

Gene

Official Symbol	CXCR5
Official Full Name	C-X-C motif chemokine receptor 5
CGNC ID	51092
also known as	BLR1, CRL1, C-X-C chemokine receptor type 5\|Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5)\|chemokine (C-X-C motif) receptor 5\|chemokine receptor
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001030912
Polypeptide	NP_001026083
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.52954

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	643			MIM:601613
Mouse	12145	ENSMUSG00000047880	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3)	MGI:103567
Xenopus	100495113			492232
Zebrafish	799019		ZDB-GENE-070302-8	ZFIN:ZDB-GENE-070302-8

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	419784
Ensembl Gene
KEGG	gga:419784

GEISHA Id	CXCR5.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GCCCTGGTCCTTGTCATTTTG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGGATGGAGGTGGTGTTGTCAGACTC	cDNA Template Length	891
Forward cDNA Template Probe	show CGCAGCCCTTCNTCGTCACCTCTAGGGATCTCCTGGTAGGGTCTCCTGGCTTATGCAGCCCAGCTCGTGCAGGATACGG AAGAAGTCGTTACGGAACTTGACCCCAATGAAGGCATAAATGATGGGGTTGAGGCAGCAGTGCGTGAAGCCAATGGCCT CTGTCACCATGATGGCGGTGTCCAGATGATCTTCCAGGAGGCAGTCCTTGGCGAAGGCTTCTAGCTTGGTCAGGGTGTT CAGAAAGATGACGATGTGGTACGGGCTCCAGCAGAGCAGGAACACACCGGTGACCAGGATGGCCACGCGGACAGCTTTC TGCCTTTGCAGGCGCTGGGACTGACACAGAGTGCGGACGATGGCCATGTAGCAGTAACACATGACCAGCAGGGGCATGA AGAAACCCACGCTGTGGTACAGGAAGCGAGTTGCCAGCCACACGTTGTTGCCGTGAATCCCAGCCTCTGGAAAATAGCA GATGCTGCGGTTGCTCTCATCTGTCCACACCTCCATGAAGATGAGATCGGGTAAGGTCAGGAGCAGGGAGGAGAGCCAG ATGGCCGTGCAGGTGAGGTGGATGGAGCGAGCTCTGCGTTTGCGGTAGGTGTGGATTGCATACACGATGGCCAAGTAGC GGTCCACCGCGATGCAGCCCAGCAGCATGCTGCTGCAGTAGAAATTGATCTTGTGGACAGCACTGAGGATCTTGCANAG GAAGGTCCCAAATACCCACCCAGCCAGGCTTTCAACCACGCTGAAGGGGAAGGTGAGCANCANTGCCAGGTTGGCCAGG GTGAGGTGGAANAGGAANTTTTCGGTGGTTGTTCNANACCGTTTGAACCTCTCCAAAATGACAAGANCCANGGCA

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 8

Ectoderm
Extraembryonic
Head Mesenchyme
Neural Plate/Tube
Notochord

13-18

stage 16

stage 16

Face Mesenchyme
Gut
Hindbrain
Midbrain
Oral Pharynx
Pharyngeal Arches and Clefts
Somites
Spinal Cord

25

stage 25

stage 25

Gut
Sclerotome
Spinal Cord

Data from NCBI Unigene EST Profile
Unigene ID: Gga.52954

Mouse

Emage
Eurexpress	MGI:103567
MGI GXD	MGI:103567

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-070302-8

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National Institute of Health

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