Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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FBXW11
F-box and WD repeat domain containing 11

Gene

Official Symbol	FBXW11
Official Full Name	F-box and WD repeat domain containing 11
CGNC ID	50183
also known as	F-box/WD repeat-containing protein 11\|F-box and WD-40 domain protein 11
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001039262
Polypeptide	NP_001034351
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4631

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	23291	ENSG00000072803		MIM:605651
Mouse	103583	ENSMUSG00000020271	All phenotypic alleles (2):Targeted, other(2)	MGI:2144023
Xenopus
Zebrafish	406825, 334373	ENSDARG00000017230, ENSDARG00000028543	ZDB-GENE-040426-2903, ZDB-GENE-030131-6305	ZFIN:ZDB-GENE-040426-2903, ZFIN:ZDB-GENE-030131-6305

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	416181
Ensembl Gene	ENSGALG00000002229
KEGG	gga:416181

Entry 1

GEISHA Id	BTRC.Aglyamova.2007	Data Source	Publication
Complete cDNA Template Probe	show TGCTCTATGCCCAGATCTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCATGCCCTCGCTGCGATGCCTGTATAACC CAGGGACTGGCGCACTCCCAGCTTTCCAGAACTCCTCTGAGAGAGAAGACTGTAATAATGATGAGCCCCCTAGGAAGAT CATTCCTGAGAAGAATTCACTTAGACAGACCTACAACAGCTGTGCCAGACTGTGCTTAAACCAGGAAACAGTATGTCTA GGAAGCACGGCTATGAAGACTGAAAATTGTGTGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA AGCAGAGAAAACTGTCAGCAAGCTATGAGAAGGAGAAGGAGCTCTGTGTCAAGTACTTTGAGCAGTGGTCTGAGTCTGA CCAGGTGGAGTTTGTGGAGCACCTCATCTCCCAGATGTGTCACTACCAGCACGGACATATAAACTCGTACCTCAAGCCC ATGTTACAGAGGGACTTCATCACTGCACTGCCAGCTCGGGGATTGGATCACATTGCTGAGAACATTCTGTCCTACCTGG ATGCCAAATCGCTGTGTGCCGCTGAGCTGGTGTGCAAGGAGTGGTACCGTGTGACGTCGGACGGCATGCTGTGGAAGAA GCTGATCGAGAGGATGGTCAGGACAGACTCGCTGTGGAGGGGCTTGTCAGAGAGGAGAGGATGGGGACAATACCTATTT AAAAATAAACCCCCTGATGGGACTGCTCCACCCAACTCATTCTACAGAGCACTTTACCCCAAAATTATACAGGATATTG AGACAATAGAGTCAAACTGGCGGTGTGGAAGGCACAGTTTACAGAGAATCCACTGCCGGAGCGAGACAAGCAAAGGTGT TTATTGTTTACAGTATGATGATCAGAAGATAGTCAGTGGCCTACGAGACAATACTATCAAGATCTGGGATAAAAATACA TTAGAATGCAAGCGAATTCTCACTGGACACACGGGTTCTGTCCTGTGCCTGCAGTATGATGAGCGGGTGATCATCACTG GATCTTCAGACTCGACTGTCAGGGTGTGGGACGTGAACGCGGGCGAGATGCTGAACACACTGATTCACCACTGTGAAGC AGTACTGCACCTCCGCTTCAATAACGGCATGATGGTGACGTGCTCCAAAGACCGTTCCATTGCTGTGTGGGACATGGCT TCACCAACAGACATCACCCTGCGGAGGGTGCTCGTAGGGCACCGTGCTGCTGTCAACGTAGTGGACTTTGATGACAAGT ACATCGTATCAGCATCAGGTGACAGAACTATAAAGGTATGGAACACTAGTACCTGCGAATTTGTGCGCACCTTAAATGG CCACAAACGAGGCATTGCATGTCTGCAGTACAGAGACAGGCTAGTAGTGAGCGGCTCTTCAGATAATACTATCAGGCTG TGGGATATCGAGTGTGGGGCATGTTTGCGAGTACTGGAAGGCCACGAGGAGCTGGTGAGATGCATACGCTTTGATAACA AGAGGATAGTCAGCGGGGCATATGATGGGAAAATTAAGGTATGGGATCTGGTGGCTGCTTTGGACCCCCGTGCTCCAGC AGGGACCCTCTGCTTGCGAACCCTTGTGGAGCATTCTGGAAGAGTTTTTCGACTTCAGTTTGATGAGTTCCAGATTGTC AGCAGCTCACACGATGACACCATCCTCATCTGGGATTTTCTGAATGACCCAGCTGCCCAAGCAGAATCCACTCGTTCCC CGTCCAGAACATACACCTACATCTCAAGATAAATAACAGTACACTGTACCTCACACTCGCACAGGACTCATTTAAGCTG CAGTATTTAAATTATCTGCCAATGCCAGGACAAAAGAACTATCCACGTAACCAATACTTGCTGAAGAGAGAGGCTCTCA GACTTGTTTCTGGAACAAAGTTGGCATGCGGTTGATCTCAGACAGGGTCTACTCAGCGTGGCTGACTGCTAAAGTGCTG CTATATCAGAAGATGACTTTTATCTTTCGTGAACTAATAACATTTTTAAACCTCCCCATCCCTTTCCTCCCTCGTCCCC ATTTTCCTGTTCACTCCCCTTCCCTTTGCCCTGTTTGGTTTCCCTCCAAACCCAGTCACAGATGTCCTGTGAATATATT TAAGATGTTGCCAGAA
Citation	Aglyamova GV, Agarwala S. Gene expression analysis of the hedgehog signaling cascade in the chick midbrain and spinal cord. Dev Dyn. 2007 May;236(5):1363-73
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421723).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 10

Isthmus/MHB
Midbrain
Neural Plate/Tube

19-24

stage 22

Midbrain
Neural Plate/Tube

Rostral Floor Plate

25-26

stage 26

Neural Plate/Tube

Rostral Floor Plate

Entry 2

GEISHA Id	BTRC.Agarwala.2005	Data Source	Publication
Complete cDNA Template Probe	show TGCTCTATGCCCAGATCTCTGTGGCTGGGCTGCTCCAGCCTGGCGGACAGCATGCCCTCGCTGCGATGCCTGTATAACC CAGGGACTGGCGCACTCCCAGCTTTCCAGAACTCCTCTGAGAGAGAAGACTGTAATAATGATGAGCCCCCTAGGAAGAT CATTCCTGAGAAGAATTCACTTAGACAGACCTACAACAGCTGTGCCAGACTGTGCTTAAACCAGGAAACAGTATGTCTA GGAAGCACGGCTATGAAGACTGAAAATTGTGTGGCCAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCA AGCAGAGAAAACTGTCAGCAAGCTATGAGAAGGAGAAGGAGCTCTGTGTCAAGTACTTTGAGCAGTGGTCTGAGTCTGA CCAGGTGGAGTTTGTGGAGCACCTCATCTCCCAGATGTGTCACTACCAGCACGGACATATAAACTCGTACCTCAAGCCC ATGTTACAGAGGGACTTCATCACTGCACTGCCAGCTCGGGGATTGGATCACATTGCTGAGAACATTCTGTCCTACCTGG ATGCCAAATCGCTGTGTGCCGCTGAGCTGGTGTGCAAGGAGTGGTACCGTGTGACGTCGGACGGCATGCTGTGGAAGAA GCTGATCGAGAGGATGGTCAGGACAGACTCGCTGTGGAGGGGCTTGTCAGAGAGGAGAGGATGGGGACAATACCTATTT AAAAATAAACCCCCTGATGGGACTGCTCCACCCAACTCATTCTACAGAGCACTTTACCCCAAAATTATACAGGATATTG AGACAATAGAGTCAAACTGGCGGTGTGGAAGGCACAGTTTACAGAGAATCCACTGCCGGAGCGAGACAAGCAAAGGTGT TTATTGTTTACAGTATGATGATCAGAAGATAGTCAGTGGCCTACGAGACAATACTATCAAGATCTGGGATAAAAATACA TTAGAATGCAAGCGAATTCTCACTGGACACACGGGTTCTGTCCTGTGCCTGCAGTATGATGAGCGGGTGATCATCACTG GATCTTCAGACTCGACTGTCAGGGTGTGGGACGTGAACGCGGGCGAGATGCTGAACACACTGATTCACCACTGTGAAGC AGTACTGCACCTCCGCTTCAATAACGGCATGATGGTGACGTGCTCCAAAGACCGTTCCATTGCTGTGTGGGACATGGCT TCACCAACAGACATCACCCTGCGGAGGGTGCTCGTAGGGCACCGTGCTGCTGTCAACGTAGTGGACTTTGATGACAAGT ACATCGTATCAGCATCAGGTGACAGAACTATAAAGGTATGGAACACTAGTACCTGCGAATTTGTGCGCACCTTAAATGG CCACAAACGAGGCATTGCATGTCTGCAGTACAGAGACAGGCTAGTAGTGAGCGGCTCTTCAGATAATACTATCAGGCTG TGGGATATCGAGTGTGGGGCATGTTTGCGAGTACTGGAAGGCCACGAGGAGCTGGTGAGATGCATACGCTTTGATAACA AGAGGATAGTCAGCGGGGCATATGATGGGAAAATTAAGGTATGGGATCTGGTGGCTGCTTTGGACCCCCGTGCTCCAGC AGGGACCCTCTGCTTGCGAACCCTTGTGGAGCATTCTGGAAGAGTTTTTCGACTTCAGTTTGATGAGTTCCAGATTGTC AGCAGCTCACACGATGACACCATCCTCATCTGGGATTTTCTGAATGACCCAGCTGCCCAAGCAGAATCCACTCGTTCCC CGTCCAGAACATACACCTACATCTCAAGATAAATAACAGTACACTGTACCTCACACTCGCACAGGACTCATTTAAGCTG CAGTATTTAAATTATCTGCCAATGCCAGGACAAAAGAACTATCCACGTAACCAATACTTGCTGAAGAGAGAGGCTCTCA GACTTGTTTCTGGAACAAAGTTGGCATGCGGTTGATCTCAGACAGGGTCTACTCAGCGTGGCTGACTGCTAAAGTGCTG CTATATCAGAAGATGACTTTTATCTTTCGTGAACTAATAACATTTTTAAACCTCCCCATCCCTTTCCTCCCTCGTCCCC ATTTTCCTGTTCACTCCCCTTCCCTTTGCCCTGTTTGGTTTCCCTCCAAACCCAGTCACAGATGTCCTGTGAATATATT TAAGATGTTGCCAGAA
Citation	Agarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
Copyright	Copyright © 2005 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421723).