GEISHA - A Chicken Embryo Gene Expression Database
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CCNJL
cyclin J-like

Gene
Official SymbolCCNJL
Official Full Namecyclin J-like
CGNC ID1007
also known ascyclin-J-like protein
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_414487
PolypeptideXP_414487
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.12900
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human79616ENSG00000135083
Mouse380694ENSMUSG00000044707MGI:2685723
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene416155
Ensembl Gene
KEGGgga:416155

Entry 1

GEISHA IdCCNJL.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-GAAAAGACCCTGTGAGTGATACGG-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGACATTACCAGCAGTTCCTCTGTCC-3'cDNA Template Length926
Complete cDNA Template Probeshow
GAAAAGACCCTGTGAGTGATACGGAATGTGTATCTGAATGAGAACCATGGAGGAACAGCATCCTTATGTCTTACTCATC
CACAGGACGTGGATCTGGATCCACTGACCACTGGAAGCTGGGTGCCTTTGCCAAGGATTGTATCTTTCTCTCTTAATAA
GAGAAATAGAAATGCAGTAACATACCTCATGGAATGTAACTTTGAAAGGCACATGCATAGCAACCCTGTGGATACTTTC
TAGTCTTCAGTTAGTGACTCACCAATCCGAGTTGGCTGAAAGCTTGAGTTGAAGTGTTATTTCAGGCTAGAGTGTTCCT
TGAATTTCTGGTTAAGTAGCAGTGTTCTTGGAGGATGTTATTGAAAACAGAGAGCTCTCTCTCTCTCCCAGGGATGTGT
CTTTTGAAGAGTGGCAGCTTATACTACTGGAAGCTTCTACAAAAAGTAGCCTGAAGTGGCATTTGCTTAAACATGGATG
CTCTTTGTTTCTGCAGAGGTTGATACATAGTACACTTCAGTTTTCTTTGACCTGGAGTGACAGTGCAGGAGTAAGACTG
CATAATAAAAAGGAACAAAGGCTGGAAGACTATCAAATAATCTTTTGTCTTAAAATTATCTTGGAAACAAGATGTGATG
CTACTGAACTGAACACAGAACACCGCTCTGCCTTTGCTTATTTGGGGAAAAAAAGTCCAACAGAAACATTAAAAAGCAT
AAATGATCTTAGAACTTAACCATGCTGCTGCTTTTTGAGACTGGAGATAATTGTTAGTAAAACTGTTTACAAGCTTTAT
CAGGGATTTAATGTTACTTGAAGAAATCTTCTTTGAAAAACTCTCAAACTTCAGTCCCTTCAGTTACTTTTGTAGTTTG
GGCTCAACGGTCTGTGGCAGCAGTTCAATTTTAGGACAGAGGAACTGCTGGTAATGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 17
stage 17
Allantois
Forebrain
Foregut
Head Mesenchyme
Neural Plate/Tube
Notochord
Sclerotome
Unlabeled
 
19-24
stage 24
stage 24
Foregut
Head Mesenchyme
Leg Mesenchyme
Mesonephros
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
25-26
stage 26
Foregut
Head Mesenchyme
Leg Mesenchyme
Lung
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Wing Mesenchyme
 

Entry 2

GEISHA IdCCNJL.Alev.2010Data SourcePublication
Complete cDNA Template Probeshow
TCCGCTCTGTTCTACGTCCCGGTGGTGCCCCGTCTGCCTCCCAGAGCTTTGTCTGGATGGGAAGAAAAAGGATGGAGGA
GCAGTGGTGGAGAGGGGAGCTGGCGGCAGACATCCATCAGACCCTGAGGACGAAGGAACTTAACCTCCCTCTGTATAAG
GCCCATTCACCACAGATTGGGATGCGCCGTTACTTCATTGATCTCTTGACCGTCCTCAGCAACCGTTGCAGTCTCTGCC
CTACAGCCCGGCACCTCGCCATCTACTTACTGGACCTCTTCATGGATCGCTATGATATCACTGTCAAGCAACTGTACGT
CACTTCGTTTGCCTGTCTTCTCCTAGCAAGTAAATTTGAAGAGAAAGAAGATAAAGTTCCGAAGTTGGAGCACTTAAAT
AACCTGGCATACATGTGCAATGTGAATGTGGTATTGAGCAAGAAAGATTTGCTTAGAATGGAAATGCTGCTTCTGGAAA
ACTTCAACTGGAACCTGTGTATACCAACAGCCGCACACTACATTGACTACTACCTCTATGCATCTATTGGTGAGAATGA
CCTTCACAACGGCTGGCCGATCACCTCACTAACCAAAGTCAAAGCATTTATGGAAAAATATGCATATTATTTCCTTGAT
TTCTCAGTGCAAGATCACAGTTTCCTTCATTTCCGTCCATCTCTGATTGCTGCAGCTTCTGTGTGTGCCTCACGCATCT
GTATGCAGATTTCTCCTGCCTGGACAACACAGCTTGAATTGCTCACGTGTTACTCCTGGGAGCACCTTGCCCAATGCAT
TGAAATGATGCTCATATATTATGAGAATGATATCAAAGAAGCCAGTAACATAAAAAAGGAAGTAACAATCCAACATCAG
CAACAGGAAGTAATGGAAAACCTGAGACATGGAGCCACTACTCAAGTTCTATTTCAGCAATCTAGTTACCATCCGTTAG
CCCAGCATTCAGCTAGTCTTTCCCAGTTCCAGTCACCAGTGCAGGATTTGTGCTCTGCTTATCGTGACTCCTTACAGGC
ACACAGGCCCAGCACTCTGCTTTCTGGGAGTGCTGACAGCTCATTGCACTCCTATGCTGCTCTTGGCCAGCCTGCAGCC
ATCTGCCCAGTCTCTGCACGTGCAATGCCTATTGCTGTGCAGGTGGCCTTAGGAACAGAGCCCAGCCACTGCATTTCCA
TGGCTTACGGTAGTAGTTACTTCAGTGGCTGCCATTCATATCCAGCCGGGTGTTTTGATGGATAAATACTGGTGTGAGA
AAAAGGTGACACGAGTGAAAACTGAAGAAAAGACCCTGTGAGTGATACGGAATGTGTATCTGAATGAGAACCATGGAGG
AACAGCATCCTTATGTCTTACTCATCCACAGGACGTGGATCTGGATCCACTGACCACTGGAAGCTGGGTGCCTTTGCCA
AGGATTGTATCTTTCTCTCTTAATAAGAGAAATAGAAATGCAGTAACATACCTCATGGAATGTAACTTTGAAAGGCACA
TGCATAGCAACCCTGTGGATACTTTCTAGTCTTCAGTTAGTGACTCACCAATCCGAGTTGGCTGAAAGCTTGAGTTGAA
GTGTTATTTCAGGCTAGAGTGTTCCTTGAATTTCTGGTTAAGTAGCAGTGTTCTTGGAGGATGTTATTGAAAACAGAGA
GCTCTCTCTCTCTCCCAGGGATGTGTCTTTTGAAGAGTGGCAGCTTATACTACTGGAAGCTTCTACAAAAAGTAGCCTG
AAGTGGCATTTGCTTAAACATGGATGCTCTTTGTTTCTGCAGAGGTTGATACATAGTACACTTCAGTTTTCTTTGACCT
GGAGTGACAGTGCAGGAGTAAGACTGCATAATAAAAAGGAACAAAGGCTGGAAGACTATCAAATAATCTTTTGTCTTAA
AATTATCTTGGAAACAAGATGTGATGCTACTGAACTGAACACAGAACACCGCTCTGCCTTTGCTTATTTGGGGAAAAAA
AGTCCAACAGAAACATTAAAAAGCATAAATGATCTTAGAACTTAACCATGCTGCTGCTTTTTGAGACTGGAGATAATTG
TTAGTAAAACTGTTTACAAGCTTTATCAGGGATTTAATGTTACTTGAAGAAATCTTCTTTGAAAAACTCTCAAACTTCA
GTCCCTTCAGTTACTTTTGTAGTTTGGGCTCAACGGTCTGTGGCAGCAGTTCAATTTTAGGACAGAGGAACTGCTGGTA
ATGTGGGCAGAGATAGGGAACTGGTTAACTTTATTGGGAAATTGGGTCAGTTGCAGCACTAGGCAATGCTGACTTAGTT
TTCTTGAACATTGCCTTGGTTCTCTTGGAAAATGTAGCTGGTGAATTGCAGATCATATTACTTTATAATGAGATGCACC
TACTGTGAGATACCCAAATGTTTCCTTTTCAATTGAGATCAGAGAAGATTGTCTAGGTCTTTGTTTGTTTAACTGCAAT
GTAGATATTTACAAGAAACAGACTTCTGAAATGTGAAACTTTTAGTTTTGATACGCAGCCACTATCGTGTGTTCCTTTG
AAGGCAATACTGTTGGACCGTCCTTTTTCCTTAAGGATCTCAGGACTGCAGTACAGGTAATGTGCAATATGCTTTTTCT
GACTTGGAGCAGCTTTTCCAAGTCATGTGTCGATGCTGTTTTAAATTATATTTTCAGAGAATTGTTTTTAAGGGCGTTT
TAAGGTGGAGGGGAAAAATTAGCCTGCATGCTGATGTGTGCTTGTGTAACCATCTTCTGAGAATGCAGTGTTTGTTGTT
AAGCTAATGATTTCCTGCATTCAGCAGGCTAGGGGCATTTTTTTCATTTAAAAAAGGCAAACATAATGAAGAGGCAATA
CTTTTCAGAAATGGGTCTAGAAGCGTAGAGAACTTAGTTCATCTTTAATTCTGTTGGTTTTGTATTTATATTAAACTTT
ATTTTTAGAAGACTGTAGTGTATTTTATATCTCGTCATTCAACAGAACTACTGAACAACACAATTGTGGCAGTACTGTT
GTATGGTTTTTCTTTGGTTTTATCACC
CitationAlev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
CopyrightPublished by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_414487.3).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4
stage 4
stage 4
Primitive Streak
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.12900

Mouse

Emage
EurexpressMGI:2685723
MGI GXDMGI:2685723

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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