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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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BTBD9
BTB domain containing 9

Gene

Official Symbol	BTBD9
Official Full Name	BTB domain containing 9
BirdBase ID	BB-GG1118
CGNC ID	7700
also known as	BTB/POZ domain-containing protein 9\|BTB (POZ) domain containing 9
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001008459
Polypeptide	NP_001008459
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.22658

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	32000			FBgn0030228
Human	114781	ENSG00000183826	MIM:611185	MIM:611237
Mouse	224671	ENSMUSG00000062202	All phenotypic alleles (2):Targeted, other(2)	MGI:1916625
Xenopus	100145760, 496252			947504
Zebrafish	100002616, 557659	ENSDARG00000068983	ZDB-GENE-040704-39	ZFIN:ZDB-GENE-040704-39

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	421429
Ensembl Gene	ENSGALG00000010131
KEGG	gga:421429

GEISHA Id	BTBD9.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-GATGATGACTGCCGTTCTGGTATC-3'
Reverse cDNA Template Primer	5'-ATTAACCCTCACTAAAGGCACCTCTGTTGTTGCCACTTCC-3'	cDNA Template Length	786
Complete cDNA Template Probe	show GATGATGACTGCCGTTCTGGTATCGAAATCAAACTAGGCCAGCCATCAATAATCAACCACATACGAATACTCCTGTGGG ACAGAGACAGTCGGTCTTACTCCTACTACATTGAGGTGTCCATGGATGAGTTAGACTGGATTCGAGTTATCGATCACTC TAAATACCTCTGTCGGTCCTGGCAGAACCTGTATTTTCCTGCCCGAGTTTGCAGGTATATTCGCATTGTTGGGACCCAC AACACAGTGAACAAAGTTTTCCATATTGTGGCATTTGAATGCATGTTTACCAACAAAACCTTCGCTCTGGAGAAGGGTC TGATAGTTCCTACTGAAAACGTTGCAACAATTGCAGATTGTGCCAGTGTGATTGAGGGTGTCAGTCGAAGTCGCAATGC CTTATTGAATGGAGACACAAAAAACTACGACTGGGATTCTGGGTATACGTGCCATCAGCTTGGGAGTGGAGCTATTGTA GTACAACTAGCACAGCCCTACATGATTGGGTCTATACGGTTACTGCTCTGGGACTGTGATGATCGAAGCTACAGCTACT ACATAGAAGTTTCAACAAATCAGCAGCAATGGACCATGGTGGCTGATCGCACAAAAGTTTCCTGCAAATCTTGGCAAAC AATCACTTTTGATAAACAGCCTGCATCTTTTATCAGAATAGTTGGAACTCAGAACACAGCTAATGAGGTGTTTCACTGT GTGCATTTTGAGTGCCCTGCACAAAGTGGTACCCACAAGGATGAGGGTTGTAAGGAAGTGGCAACAACAGAGGTG

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

stage 6

Neural Plate/Tube
Unlabeled

No expression prior to stage 5
Very faint expression

13-18

stage 8

stage 9

stage 9

stage 11

Anterior Intestinal Portal
Blood Islands
Lateral Plate Mesoderm
Neural Plate/Tube
Somites

19-24

stage 19

stage 23

stage 24

Eye
Foregut
Head Mesenchyme
Lung
Midbrain
Neural Plate/Tube
Oral Pharynx
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Spinal Ganglia and Nerves
Wing Mesenchyme

25-27

stage 27

stage 27

Foregut
Head Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Data from NCBI Unigene EST Profile
Unigene ID: Gga.22658

Mouse

Emage	MGI:1916625
Eurexpress	MGI:1916625
MGI GXD	MGI:1916625

Frog

Xenbase

Fruit Fly

BDGP	FBgn0030228

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-040704-39

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