GEISHA - A Chicken Embryo Gene Expression Database
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PPT1
palmitoyl-protein thioesterase 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolPPT1
Official Full Namepalmitoyl-protein thioesterase 1
CGNC ID2887
also known aspalmitoyl-protein thioesterase 1|palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001030903
PolypeptideNP_001026074
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4593
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly31805FBgn0030057
Human5538ENSG00000131238MIM:600722MIM:600722
Mouse19063ENSMUSG00000028657All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:1298204
Xenopus448650, 100037210923069
Zebrafish406648ENSDARG00000039980ZDB-GENE-040426-2653ZFIN:ZDB-GENE-040426-2653
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419681
Ensembl GeneENSGALG00000003936
KEGGgga:419681
GEISHA IdPPT1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-AGATGCCCTTCTCCTCCCAT-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGCAAATGACCAGCACAGCCAC-3’cDNA Template Length846
Complete cDNA Template Probeshow
AGATGCCCTTCTCCTCCCATGTTCACTTTGATCTCCATTGGGGGGCAGCACCAAGGAGTGTATGGCTTTCCACGCTGTC
CTGGTGAGAGCTCCCAAATCTGTGACTGGATCCGAAAGATGCTGGATCTGGGTGCCTACACACAAGCTGTTCAAGAGCA
CTTGGTACAAGCACAGTATTGGCATGATCCTTTGAAGGAGGAGGACTACAGAAAAAAGAGCATCTTTTTGGCTGACATA
AATCAGGAGAGGGGCATCAATGAGACATACAAGAAAAACCTGATGGCTTTGAAAAAGTTCGTGATGGTGAAATTTCTCA
ATGATACTATGGTTGATCCTCCGATCTCTGAGTGGTTTGGGTTTTACAAAAGCGGCCAAGCCAAGGACACCATTCCTTT
GAAGGAGACCTTGCTGTACAAAGAGGATCGCCTGGGGCTGCAGCAGATGGACAAAGCAGGAAAGCTGGTGTTCCTGGGG
GTGGAAGGGGATCACCTGCACTTCACAGAAGAGTGGTTTTATACCCATATCCTCCCATTCCTCCAGTGAAGCTAAGGAG
AGGCACCTCATGGGAGCGCTCAGGAGAGTTTCACTGTAGTGAATGCAACTGCTACTGCGCAACAGTATTTTGTGTATGT
CCATGGGGGAGGTGGGGAAGAGTGGGATTGGGGGGGGGTTAATCTCAGCAACAGCACCTGCTATACACTGTGGCAAGAC
TGGAATTCACCTGGATGTAATTAGTTCCAGTATGAGGGGAGGGGAGTGAGCCTTGCACTAACTTTGAAGCACTCCATCC
CACACCAGCCCTACATCTACTCCTGGTCTCAGAGCTGTGGCTGTGCTGGTCATTTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Epiblast
Primitive Streak
 
7-12
stage 7
stage 10
stage 11
Anterior Intestinal Portal
Epiblast
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Headfold
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Somites
extraembryonic mesoderm
 
13-18
stage 16
stage 18
stage 18
stage 18
Widespread Expression
 
19-24
stage 22
stage 23
Foregut
Head Mesenchyme
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
25-26
stage 26
Head Mesenchyme
Leg Mesenchyme
Mesonephros
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4593

Mouse

EmageMGI:1298204
EurexpressMGI:1298204
MGI GXDMGI:1298204

Frog

Xenbase923069

Fruit Fly

BDGPFBgn0030057

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-2653
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