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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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MGAT3
mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase

Gene

Official Symbol	MGAT3
Official Full Name	mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
CGNC ID	9215
also known as	beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001012693
Polypeptide	NP_001012711
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.1768

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	4248	ENSG00000128268		MIM:604621
Mouse	17309	ENSMUSG00000042428	All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1)	MGI:104532
Xenopus	100492491, 100381104			964869
Zebrafish	570828, 553676	ENSDARG00000038069	ZDB-GENE-050522-249, ZDB-GENE-130820-2	ZFIN:ZDB-GENE-050522-249, ZFIN:ZDB-GENE-130820-2

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418013
Ensembl Gene
KEGG	gga:418013

Entry 1

GEISHA Id	MGAT3.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show AAGCATGAGCCACTGCCTTTCTGGGACCAACATTATCTGTGGTTCACCAACCTTTCCCTGCAGCTGTGTGCTTTTTCTT CCCTAGAACCTTTCCACCTTCAGATTAATTGGTGTCAGGGAAGGCTGGGTAGATGAGGCAGCACGTGGCATCCCCATAC TTTGTGCACCCCTATATTTTGCCCTTCTTTCTGCCCAACTCTGCTCAACTTCCTTTGTACCCATGCGTGGCTTTGGGGT GGGGAGCTTCTCTCCCTCCTTCCTCCCAGGTGAAGGAGAGGATGTGGGCTAATGCCTCTGCCCCTCCAGGGAACAAAGG CAGTGAGGTGGTACAGTACTCAGCAAGAGATGGGTTGGGGTTTTGCCTGCATGAAGGACAACACGCTCAACAGTCTGCT CTCACTATTGCTTTCTCTGATCCCTGTGTCCCTGCTGAGGTGTTTGCTGTTGTGCAGCCTGTTCTTTGTGCCTCTGTGC TGGATAGAGGAAGGGGACCTTGTGGCCTCCAGGTAACTTACGAGTCAGGGTGGGGGCAGTGTCAGTGCAGAACGGGTAT TCGTTCCCCTGGTGCCTCTTGGCGTGTCCTTGTGGGGTGGCAGTGTCTCTTCCTGTCCCACTGTTCCTGCCAGCACTCC GTGGCTGCTATGCCTATGCACTGTGAAGATGTGTCGGGAGTCACTCCTGGTCCTGTTAGCGAACACTGGTGGTGAAGAG GGAAGGGATGGCTCTTCCTGGCCTCACTGACCTCAAGCCTTGGTGAGAAGGGAGGGAAATATGGTAGAATGGATCTCAA ATCCCTCAATTGCTGCGTCTCCCCTATCCACCAAAAAATCTCCTTCTGATTTCTGAGACATTGGACGAATCTGTCTTAT TGAAAAGAGGG
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Ventricles

all

Entry 2

GEISHA Id	MGAT3.Anderson.2022	Data Source	Publication
Complete cDNA Template Probe	show AAGCATGAGCCACTGCCTTTCTGGGACCAACATTATCTGTGGTTCACCAACCTTTCCCTGCAGCTGTGTGCTTTTTCTT CCCTAGAACCTTTCCACCTTCAGATTAATTGGTGTCAGGGAAGGCTGGGTAGATGAGGCAGCACGTGGCATCCCCATAC TTTGTGCACCCCTATATTTTGCCCTTCTTTCTGCCCAACTCTGCTCAACTTCCTTTGTACCCATGCGTGGCTTTGGGGT GGGGAGCTTCTCTCCCTCCTTCCTCCCAGGTGAAGGAGAGGATGTGGGCTAATGCCTCTGCCCCTCCAGGGAACAAAGG CAGTGAGGTGGTACAGTACTCAGCAAGAGATGGGTTGGGGTTTTGCCTGCATGAAGGACAACACGCTCAACAGTCTGCT CTCACTATTGCTTTCTCTGATCCCTGTGTCCCTGCTGAGGTGTTTGCTGTTGTGCAGCCTGTTCTTTGTGCCTCTGTGC TGGATAGAGGAAGGGGACCTTGTGGCCTCCAGGTAACTTACGAGTCAGGGTGGGGGCAGTGTCAGTGCAGAACGGGTAT TCGTTCCCCTGGTGCCTCTTGGCGTGTCCTTGTGGGGTGGCAGTGTCTCTTCCTGTCCCACTGTTCCTGCCAGCACTCC GTGGCTGCTATGCCTATGCACTGTGAAGATGTGTCGGGAGTCACTCCTGGTCCTGTTAGCGAACACTGGTGGTGAAGAG GGAAGGGATGGCTCTTCCTGGCCTCACTGACCTCAAGCCTTGGTGAGAAGGGAGGGAAATATGGTAGAATGGATCTCAA ATCCCTCAATTGCTGCGTCTCCCCTATCCACCAAAAAATCTCCTTCTGATTTCTGAGACATTGGACGAATCTGTCTTAT TGAAAAGAGGG
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST45g15. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.