GEISHA - A Chicken Embryo Gene Expression Database
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ASCL1
achaete-scute family bHLH transcription factor 1

Gene
Official SymbolASCL1
Official Full Nameachaete-scute family bHLH transcription factor 1
CGNC ID49152
also known asCASH1, achaete-scute homolog 1|achaete-scute complex homolog 1|achaete-scute complex-like 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204412
PolypeptideNP_989743
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.488
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene386573
Ensembl Gene
KEGGgga:386573

Entry 1

GEISHA IdASCL1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCCCCGACCCGTTCCAGAG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGCAAAAGGCAGCATACAAAACCAGACcDNA Template Length496
Forward cDNA Template Probeshow
CCCCCCCGGATTAACGAGGCCGCTCTTCGCGTTGGACAATAGCTGCATAAACGTGGTTCCCTCGGAACACGCGTTTTCA
CAACGCTTATTAATACATTAACAAAGTTTCTATGAAGTAAGACACGTCGGTGCTAAAGTACAGCTGGAGGGAGTCCAAG
GCCTCGACAAAAGCACGGACCGAGATGGCAGCGGGAAAGTAACGCCGACCGCACGTCTACACACCGAGAGGTAAAAGCA
TCGTGTATTAAAAAACGTATCAAGATATACACATTTTAAACCATTTGTACAAAACCTCTATAAATCTCTCTCTCTCTTA
TGTACAAAAATAGCTTAATATATGTCCCCAAACTGGTCAGGGAGGATACAAATAGATTTTCTTATAATAAAAAAATTCA
CCAAAATAATAATTAAAAAAAAAAAATTGGAAGCTTTCTTTGGGGAAAAAAAAAAGGGGCGAAGGGGGGGGGACCCTGG
ACCGGGTCGGGGGAAAAAAAAAAAAA
CommentsNo specific expression detected at or before stage 9.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 11
Neural Crest
Unlabeled
Dorsal view.
13-18
stage 13
stage 13
stage 17
stage 18
stage 18
Ear/Otic Placode
Eye
Forebrain
Hindbrain
Midbrain
Nasal Placode/Nerve
Neural Crest
Neural Plate/Tube
Somites
Spinal Cord
Spinal Ganglia and Nerves
Dorsal view.
Ventral view.
19-24
stage 24
Eye
Forebrain
Hindbrain
Midbrain
Nasal Placode/Nerve
Somites
Spinal Cord
Spinal Ganglia and Nerves
 

Entry 2

GEISHA IdMash1.Gimeno.2007Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATT
CitationGimeno L, Martinez S. Expression of chick Fgf19 and mouse Fgf15 orthologs is regulated in the developing brain by Fgf8 and Shh. Dev Dyn. 2007 Aug;236(8):2285-97.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204412).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-20
stage 20
Diencephalon
Midbrain
pretectum, zona limitans intrathalamica

Entry 3

GEISHA IdASH1.Chesnutt.2004Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationChesnutt C, Burrus LW, Brown AM, Niswander L. Coordinate regulation of neural tube patterning and proliferation by TGFbeta and WNT activity. Dev Biol. 2004 Oct 15;274(2):334-47.
CopyrightReprinted from Developmental Biology, Volume 274, Issue 2, Catherine Chesnutt, Laura W. Burrus, Anthony M.C. Brown, and Lee Niswander, Coordinate regulation of neural tube patterning and proliferation by TGFβ and WNT activity, Pages 334-347, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsThe authors said the ASH1 probe is referenced in Jasone et al., 1994. Clone was listed there as acc# U01339.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14
Neural Crest
Spinal Cord
 

Entry 4

GEISHA IdCash-1.McPherson.2000Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationMcPherson CE, Varley JE, Maxwell GD. Expression and regulation of type I BMP receptors during early avian sympathetic ganglion development. Dev Biol. 2000 May 1;221(1):220-32.
CopyrightReprinted with permission from Elsevier. Copyright © 2000 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421225). Images are Quail, sequence and map are from chick ASCL1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 16
stage 17
stage 18
stage 18
Dermomyotome
Spinal Ganglia and Nerves
Figure 4 compares the expressions of Cash-1, BMP-4, BMPR-IA, and BMPR-IB mRNA in stage 16, 17, and 18 quail embryos.
Quail
Sympathetic Ganglia
19-23
stage 23
stage 23
Spinal Ganglia and Nerves
Figure 2 compares the expressions of BMP-4, BMPR-IA, BMPR-IB, and TH mRNAs in stage HH23 quail embryos.
Quail
Sympathetic Ganglia

Entry 5

GEISHA IdCASH1.Maier.2009Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationMaier E, Gunhaga L. Dynamic expression of neurogenic markers in the developing chick olfactory epithelium. Dev Dyn. 2009 Jun;238(6):1617-25.
CopyrightDev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_204412.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 14
stage 17
stage 17
Nasal Placode/Nerve
 
19-24
stage 22
stage 22
stage 22
Nasal Placode/Nerve
 
25-30
stage 29
stage 29
Nasal Placode/Nerve
 
31-34
stage 34
stage 34
Nasal Placode/Nerve
 

Entry 6

GEISHA IdCASH1/ASCL1.Sanders.2002Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationSanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50.
CopyrightCopyright © 2002-2011 by the Society for Neuroscience
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc# NM_204412.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
stage 24
Forebrain
Hindbrain
Isthmus/MHB
Midbrain
 

Entry 7

GEISHA IdASCL1.Buchtova.2010Data SourcePublication
Complete cDNA Template Probeshow
TCGGTCCGTGCTTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTC
CitationBuchtová M, Kuo WP, Nimmagadda S, Benson SL, Geetha-Loganathan P, Logan C, Au-Yeung T, Chiang E, Fu K, Richman JM. Whole genome microarray analysis of chicken embryo facial prominences. Dev Dyn. 2010 Feb;239(2):574-91.
CopyrightCopyright © 1999–2011 John Wiley & Sons, Inc. All Rights Reserved.
CommentsThe probe for ASCL1 was amplified by PCR using the following primers: 5′-TCGGTCCGTGCTTTTGTC-3′ and 5′-GAAGTAAGACACGTCGGTGCT-3′.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 15
stage 15
stage 17
stage 17
Ear/Otic Placode
Eye
Face Mesenchyme
Forebrain
Hindbrain
Midbrain
Nasal Placode/Nerve
Spinal Cord
Optic recess
25-26
stage 26
stage 26
Nasal Placode/Nerve
 

Entry 8

GEISHA IdASCL1.LeDréau.2012Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationLe Dréau G, Garcia-Campmany L, Rabadán MA, Ferronha T, Tozer S, Briscoe J, Martí E. Canonical BMP7 activity is required for the generation of discrete neuronal populations in the dorsal spinal cord. Development. 2012 Jan;139(2):259-68.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204412.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Neural Plate/Tube
Surface Ectoderm
 

Entry 9

GEISHA IdCASH1.Frowein.2002Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationFrowein J, Campbell K, Götz M. Expression of Ngn1, Ngn2, Cash1, Gsh2 and Sfrp1 in the developing chick telencephalon. Mech Dev. 2002 Jan;110(1-2):249-52.
CopyrightCopyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204412.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
Telencephalon
 

Entry 10

GEISHA IdCASH1.Howard.2000Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationHoward MJ, Stanke M, Schneider C, Wu X, Rohrer H. The transcription factor dHAND is a downstream effector of BMPs in sympathetic neuron specification. Development. 2000 Sep;127(18):4073-81.
CopyrightCopyright is held by the authors. Published by The Company of Biologists, Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204412.1 )
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Neural Crest
sympathetic chain

Entry 11

GEISHA IdASCL1.Ratie.2013Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationLeslie Ratié, Michelle Ware, Frédérique Barloy-Hubler, Hélène Romé, Isabelle Gicquel, Christèle Dubourg, Véronique David and Valérie Dupé. Novel genes upregulated when NOTCH signalling is disrupted during hypothalamic development. Neural Dev. 2013 Dec 23;8:25. doi: 10.1186/1749-8104-8-25.
Copyright© 2013 Ratié et al.; licensee BioMed Central Ltd.
CommentsThe sequence below was obtained from NCBI (acc # NM_204412.1) using the information provided in the publication as described in Ratie et al.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-15
stage 14
stage 14
stage 14
stage 15
stage 15
stage 15
stage 15
Hypothalamus
Mesencephalon
Double Labeled ISH: HEY1, blue; SHH, red
left embryo = control vehicle, DMSO; right embryo = DAPT-treated

Entry 12

GEISHA IdASCL1.Ware.2014Data SourcePublication
Complete cDNA Template Probeshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
CitationWare M, Hamdi-Rozé H and Dupé V (2014) Notch signaling and proneural genes work together to control the neural building blocks for the initial scaffold in the hypothalamus. Front Neuroanat. 2014 Dec 2;8:140. doi: 10.3389/fnana.2014.00140.
CopyrightCopyright © 2014 Ware, Hamdi-Rozé and Dupé
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204412.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 10
Hypothalamus
 
13-15
stage 15
stage 15
Hypothalamus
Double labeled in situ: Ascl (purple), Shh (Red)
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.488

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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