GEISHA - A Chicken Embryo Gene Expression Database
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BASP1
brain abundant membrane attached signal protein 1

Gene
Official SymbolBASP1
Official Full Namebrain abundant membrane attached signal protein 1
CGNC ID9805
also known asCAP-23, brain acid soluble protein 1 homolog|23 kDa cortical cytoskeleton-associated protein|brain acid soluble protein 1 homolog23 kDa cortical cytoskeleton-associated protein|particle bound cytosolic protein CAP23
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204116
PolypeptideNP_989447
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3179
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10409ENSG00000176788MIM:605940
Mouse70350ENSMUSG00000045763All phenotypic alleles (5):Targeted, other(5) MGI:1917600
Xenopus496542, 7348776258617
Zebrafish569631ENSDARG00000053358ZDB-GENE-070424-158ZFIN:ZDB-GENE-070424-158
Gene Ontology
Molecular Functionprotein domain specific binding, transcription corepressor activity, more...transcription regulatory region DNA binding
Biological Processglomerular visceral epithelial cell differentiation, more...negative regulation of transcription, DNA-templated
Cellular ComponentCOP9 signalosome, cortical cytoskeleton, cytoplasm, more...extrinsic component of cytoplasmic side of plasma membrane, growth cone, nuclear speck, nucleus
Links to other databases
Entrez Gene373905
Ensembl GeneENSGALG00000012952
KEGGgga:373905
GEISHA IdBASP1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGATGCTCAGGTCTCTGCCAATAAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGGTTTCGCTTCCTCTGGTGGGcDNA Template Length493
Forward cDNA Template Probeshow
TGAAGGGTCCGAAGCCTTGGCAGTGGAAACTAGGTGCTGCTGTGGCTGCTACGGTCTCCTTGGAAGAAGGTGCAGCCTC
GCTGCTGCTAGGTTTTGAGTCTGAAGCTGGGGCCACTTCGCTTTTAGTTTCTTGGGCTGCAGGCGTTGCGGGAGCCTCA
GTCTTTTTGGCTTCCCCTTCCTCTTTGCTCTTGTCATCNGCTTTGCTGGGAGCTGTGGCTTCTGAAGGCTGGGAAGCTT
TTGCATCGCTGCTAGGCTCAGAAGTTTTGGGTGCTTCGCTACTGGCAGCAGGAGCAGAGGCTGCAGCTGGCTCCTCTTG
CTTGGGTGCCTGTTCATTGTTCTTCTGTGGCTCTAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
Area Opaca
Early Mesoderm
Ectoderm
Extraembryonic Mesoderm
Primitive Streak
extraembryonic ectoderm
 
7-12
stage 8
stage 9
stage 9
stage 9
stage 10
stage 10
stage 10
stage 10
stage 12
Amnion
Area Opaca
Ear/Otic Placode
Ectoderm
Endoderm
Forebrain
Head Mesenchyme
Head Process
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Sclerotome
Somites
Splanchnic Mesoderm
Widespread Expression
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
Not heart
not heart
13-18
stage 17
stage 17
stage 17
stage 17
stage 18
Allantois
Dermomyotome
Ectoderm
Endoderm
Extraembryonic Blood Vessels
Lateral Plate Mesoderm
Notochord
Somatic Mesoderm
Splanchnic Mesoderm
Widespread Expression
Yolk Sack or Stalk
extraembryonic ectoderm
Not heart
Not heart!
19-24
stage 21
Allantois
Eye
Foregut
Head Mesenchyme
Heart
Hindgut
Leg Mesenchyme
Lung
Mesonephros
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Wing Mesenchyme
 
25-26
stage 25
stage 26
stage 26
stage 26
stage 26
Allantois
Atria
Foregut
Head Mesenchyme
Heart
Hindgut
Leg Mesenchyme
Liver
Lung
Mesonephros
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3179

Mouse

Emage
EurexpressMGI:1917600
MGI GXDMGI:1917600

Frog

Xenbase6258617

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070424-158
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