|
| HOXA13 homeobox A13 | The human orthologue of this gene is associated with the following human diseases: |
Gene | Official Symbol | HOXA13 | Official Full Name | homeobox A13 | CGNC ID | 16060 | also known as | Hox A13, homeobox protein Hox-A13|HOX protein|homeo box A13|homeobox protein HOXA13|transcription factor HOXA13, Homeobox protein Hox-A13 | gene type | protein-coding |
| Genomic Map | | Sequence Information | | Gene Expression | | Orthology | | Gene Ontology | | Links to other databases | |
Entry 1GEISHA Id | HOXA13.UApcr | Data Source | GEISHA ISH Analysis | Forward cDNA Template Primer | GAGCCCGCTGTCAAGCAGTG | Reverse cDNA Template Primer | AATTAACCCTCACTAAAGCCGCCGTTTGTCTTTGGTTATG | cDNA Template Length | 579 | Forward cDNA Template Probe | show GAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCCTCCGGCGCCGCGCTGCCCTACGGCTACT TCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGTCCTGCGCCCAGCCCGCCTCCACCTTCGC CGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGCCAAGGAGTTCGCCTTCTACCAGGGCTAC GCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTGCCCACCATCGGCGGCCCCGGCGAGCCGC GCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCAACGGGTGGAACGGGCAAGTGTACTGCCC CAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGTCGTCTCGCATCCCTCGGATGCGAACTCG TACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAAGAACTCGAAAGGGAATACGCTACAAATA AATTCAT | Comments | No expression detected at or before stage 4. |
Entry 2GEISHA Id | HoxA13.Matsushita.2002 | Data Source | Publication | Complete cDNA Template Probe | show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAAC | Citation | Matsushita S, Ishii Y, Scotting PJ, Kuroiwa A, Yasugi S. Pre-gut endoderm of chick embryos is regionalized by 1.5 days of development. Dev Dyn. 2002 Jan;223(1):33-47. | Copyright | Copyright © 2002 Wiley-Liss., Inc. | Comments | Insufficient information provided to identify probe sequence. |
Entry 3GEISHA Id | Hoxa13.Tiecke.2006 | Data Source | Publication | Complete cDNA Template Probe | show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT | Citation | Tiecke E, Bangs F, Blaschke R, Farrell ER, Rappold G, Tickle C. Expression of the short stature homeobox gene Shox is restricted by proximal and distal signals in chick limb buds and affects the length of skeletal elements. Dev Biol. 2006 Oct 15;298(2):585-96. Epub 2006 Jul 12. | Copyright | Reprinted from Developmental Biology, 298, Eva Tiecke, Fiona Bangs, Rudiger Blaschke, Elizabeth R. Farrell, Gudrun Rappold, and Cheryll Tickie, Expression of the short stature homebox gene Shox is restricted by proximal and distal signals in chick limb buds and affects the length of skeletal elements, 585-596, 2006, with permission from Elsevier.
Copyright © 2006 Elsevier B.V. All rights reserved. | Comments | Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204139). |
Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 31-35 | | stage 35 | | Wing
|
Entry 4GEISHA Id | HOXA13.Theodosiou.2007 | Data Source | Publication | Complete cDNA Template Probe | show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT | Citation | Theodosiou NA, Hall DA, Jowdry AL. Comparison of acid mucin goblet cell distribution and Hox13 expression patterns in the developing vertebrate digestive tract. J Exp Zool B Mol Dev Evol. 2007 Jul 15;308(4):442-53. | Copyright | Copyright © 1999-2010 John Wiley & Sons, Inc. All Rights Reserved. | Comments | Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_204139.1) |
Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 25-26 | | stage 26 | | stage 26 | | stage 26 | | stage 26 | | Endoderm Hindgut Leg Mesoderm Tail
|
Entry 5GEISHA Id | HOXA13.Hughes.2011 | Data Source | Publication | Complete cDNA Template Probe | show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT | Citation | Hughes MW, Wu P, Jiang TX, Lin SJ, Dong CY, Li A, Hsieh FJ, Widelitz RB, Chuong CM. In search of the Golden Fleece: unraveling principles of morphogenesis by studying the integrative biology of skin appendages Integr Biol (Camb). 2011 Apr;3(4):388-407. Epub 2011 Mar 24.
| Copyright | © Royal Society of Chemistry 2011 | Comments | Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204139.1). |
Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 25-29 | | stage 26 | | stage 26 | | stage 29 | | Feathers/Scutae Limb Buds Tail
|
Entry 6Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 19-23 | | stage 22 | | stage 22 | | stage 23 | | stage 23 | | stage 23 | | Limb Buds Wing AER
|
Entry 7GEISHA Id | Hoxa-13.Nelson.1996 | Data Source | Publication | Complete cDNA Template Probe | show GAGCTCCTCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCC ATCAAGTCCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGT CGCGGGCCAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCC CGTGGTGCCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCC ATCACCAACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCC CGGACGTCGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCA GTTAAAAGAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACG AATCTGTCAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGA CGACCAGTTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCC | Citation | Nelson CE, Morgan BA, Burke AC, Laufer E, DiMambro E, Murtaugh LC, Gonzales E, Tessarollo L, Parada LF, Tabin C. Analysis of Hox gene expression in the chick limb bud. Development. 1996 May;122(5):1449-66. | Copyright | Copyright © 1996 by Company of Biologists | Comments | The complete cDNA template sequence was obtained from the information from the publication as described in Nelson et al. 1996. |
Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 19-24 | | stage 19 | | stage 19 | | stage 23 | | stage 23 | | stage 23 | | Leg Unlabeled Wing
| 25-30 | | stage 25 | | stage 25 | | stage 25 | | stage 25 | | stage 25 | | stage 27 | | stage 28 | | stage 28 | | Leg Wing
| 31-44 | | stage 44 | | stage 44 | | stage 44 | | |
Entry 8GEISHA Id | HOXA13.Yamamoto-Shiraishi.2020 | Data Source | Publication | Complete cDNA Template Probe | show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT | Citation | Yamamoto-Shiraishi Y, Kuroiwa A. Wnt and BMP signaling cooperate with Hox in the control of Six2 expression in limb tendon precursor. Dev Biol. 2013 May 15;377(2):363-74 | Copyright | © Elsevier Inc. All rights reserved | Comments | Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204139.1). |
Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 25-26 | | stage 26 | | Leg
| all | | |
Entry 9Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 19-22 | | stage 20 | | stage 20 | | stage 22 | | stage 22 | | Leg Unlabeled Wing
| all | | |
| Data from NCBI Unigene EST Profile Unigene ID: Gga.76 |
MouseFrogFruit FlyZebra FinchZebrafish
|
|