GEISHA - A Chicken Embryo Gene Expression Database
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CTNNA2
catenin alpha 2

Gene
Official SymbolCTNNA2
Official Full Namecatenin alpha 2
CGNC ID49620
also known ascatenin alpha-2|alpha N-catenin|catenin (cadherin-associated protein), alpha 2|neural alpha-catenin
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_205136
PolypeptideNP_990467
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly40517FBgn0010215
Human1496ENSG00000066032MIM:114025
Mouse12386ENSMUSG00000063063All phenotypic alleles (3):Spontaneous(1) Targeted, knock-out(2) MGI:88275
Xenopus100037860, 4447105955200
Zebrafish567500ENSDARG00000024785ZDB-GENE-060815-3ZFIN:ZDB-GENE-060815-3
Gene Ontology
Molecular Functioncadherin binding, protein binding, structural molecule activity
Biological Processaxonogenesis, brain morphogenesis, cell-cell adhesion, dendrite morphogenesis, more...epithelial cell differentiation, regulation of synapse structural plasticity
Cellular Componentactin cytoskeleton, adherens junction, axon, cytoplasm, plasma membrane
Links to other databases
Entrez Gene396035
Ensembl Gene
KEGGgga:396035
GEISHA IdaNCATENIN.Jhingory.2010Data SourcePublication
Complete cDNA Template Probeshow
GGGAGTCGTGCTGCACACCCAGCCCGTAAGTAAACGCCGCTGCTGGAGAGGAGGAGGAGGAGGAGAAGGAGGCGGCGGC
GGCGGCGAGAGGTTCTCCCACCCCCACCCACCGAGCTGAGGGAGTATGACTTCTGCAACGTCACCTATCATTTTGAAAT
GGGACCCCAAAAGTTTGGAAATCAGGACTCTCACAGTAGAGAGGCTACTGGAGCCACTCGTTACTCAGGTAACAACACT
CGTTAACACAAGCAACAAGGGACCATCTGGCAAGAAGAAAGGGCGCTCCAAGAAGGCCCATGTGTTGGCTGCCTCCGTA
GAGCAGGCTACTCAAAACTTTTTAGAGAAAGGAGATCAAATTGCTAAAGAGAGCCAGGATCTGAAGGAGGAACTGGTTG
CTGCTGTGGAGGATGTACGCAAACAAGGAGAAACAATGAGAATTGCCTCTTCAGAGTTTGCAGACGACCCATGCTCCTC
AGTGAAGCGGGGCACGATGGTGAGGGCTGCTCGTGCCTTGCTTTCTGCTGTTACCCGCTTGCTCATCCTGGCTGATATG
GCGGACGTCATGAGGCTTCTTTCACATCTGAAAATTGTAGAGGAAGCACTAGAAGCAGTGAAAAATGCAACAAATGAAC
AAGATTTAGCAAATCGCTTCAAAGAATTTGGAAAAGAGATGGTGAAACTGAATTATGTAGCTGCACGGCGACAGCAGGA
GCTGAAAGATCCTCACTGCAGGGATGAAATGGCTGCAGCTCGAGGTGCTCTGAAGAAGAATGCCACAATGTTGTATACT
GCATCCCAAGCATTTCTTCGTCACCCTGATGTTGCAGCTACTAGGGCCAACAGAGACTATGTCTTCAAGCAAGTTCAAG
AAGCAATTGCTGGTATTTCCAACGCTGCCCAGGCCACCTCACCCACTGATGAAAACAAGGGGCATACTGGCATTGGAGA
GCTTGCTGCTGCACTAAATGAATTTGATAACAAAATCATCTTAGACCCCATGACGTTCAGCGAGGCCCGCTTCAGGCCC
TCTCTGGAGGAGAGGCTGGAGAGCATTATCAGTGGGGCAGCGCTGATGGCAGACTCCTCGTGCACGCGGGATGACCGCA
GGAAGCGCATCGTAGCTGAGTGCAAACGCGCTGTGCGGCAGGCACTGCAGGACCTGCTCAGCGAGTACATGAACAATAC
TGGAAGGAAAGAGAAGGGGGACCCACTCAACATTGCTATTGACAAGATGACCAAGAAAACACGAGACCTTCGAAGACAG
CTCCGGAAGGCAGTAATGGATCATATATCAGATTCGTTCCTGGAGACCAATGTGCCATTGCTGGTTCTCATCGAGGCTG
CCAAAAGCGGTAATGAGAAAGAAGTGAAGGAGTACGCGCAGGTCTTCCGTGAGCATGCCAACAAGCTCGTTGAGGTTGC
AAATCTGGCCTGTTCCATCTCAAATAATGAAGAAGGTGTGAAGCTAGTGCGTATGGCAGCAACACAGATTGATAGTCTG
TGCCCCCAGGTAATAAATGCTGCGCTGACGTTGGCTGCCAGACCTCAGAGCAAAGTAGCACAGGACAACATGGATGTCT
TTAAGGATCAGTGGGAGAAACAAGTGCGAGTTCTCACTGAAGCAGTTGATGACATCACTTCAGTGGATGATTTCCTCTC
TGTTTCAGAAAATCATATTCTGGAAGATGTGAACAAATGTGTGATTGCTCTCCAAGAGGGAGATGTCGATACCCTGGAT
AGAACTGCTGGGGCCATCCGAGGCCGTGCAGCCAGAGTCATTCACATCATTAATGCAGAGATGGAAAACTATGAAACTG
GAGTTTATACCGAGAAGGTACTGGAAGCAACCAAACTGCTCTCTGAAACAGTTATGCCACGTTTTGCTGAACAAGTTGA
GGTTGCCATTGAAGCGTTGAGTGCGAATGTCCCACAGCCATTTGAAGAGAATGAGTTCATAGATGCCTCCCGCTTGGTT
TATGATGGAGTTCGTGACATCAGGAAAGCTGTTCTGATGATAAGGACCCCTGAAGAGCTGGAGGATGATTCAGACTTTG
AGCAGGAAGATTATGATGTTCGCAGCCGAACAAGTGTTCAGACTGAAGATGACCAGCTTATTGCTGGCCAGAGTGCAAG
GGCTATCATGGCTCAGCTCCCCCAGGAGGAAAAGGCTAAGATTGCTGAGCAGGTAGAGATATTCCACCAAGAAAAGAGC
AAACTGGATGCAGAGGTAGCCAAGTGGGATGACAGCGGTAATGACATCATTGTGTTGGCAAAACAGATGTGCATGATTA
TGATGGAAATGACAGACTTCACTAGAGGTAAAGGCCCACTGAAGAATACATCTGATGTCATTAATGCAGCCAAGAAGAT
TGCAGAGGCAGGATCAAGGATGGACAAACTTGCACGGGCAGTAGCTGATCAGTGCCCTGACTCAGCCTGCAAACAGGAC
CTGCTAGCCTACCTACAGCGCATTGCCCTCTACTGCCACCAGCTCAACATCTGCAGCAAAGTCAAGGCAGAAGTTCAGA
ACCTGGGAGGAGAACTTATTGTATCAGGGCTGGACAGTGCCACTTCACTCATCCAGGCAGCTAAAAATCTGATGAACGC
TGTGGTCCTTACAGTGAAGGCATCATATGTAGCTTCTACTAAGTATCAGAAGGTCTATGGTACTGCTGCAGTGAACTCC
CCAGTTGTATCTTGGAAGATGAAGGCACCTGAGAAGAAACCTCTAGTAAAGAGAGAAAAACCAGAAGAATATCAGACAA
GAGTGAGAAGAGGGTCCCAGAAGAAACATATTTCCCCTGTACAGGCCTTAAGTGAATTTAAAGCTATGGATTCATTCTA
AAACACTAAGCTTTACCAGCAGGGTTTTATATTCTTTTTGTATGCATACCTGCCGACTTGTATGCGTCTGGCATGGGGT
GGGGGGGAAGCAGTGTCAATTTGCATGTGACCTGAAGCTCTATTGAAGTAACTACTTTCTGCAATGCCAAAATTTAAGG
GCGTTCTCTTCCAATGTTCAGTGGACTTGGTCCAAGCTTACTTTTTAAACTAAACTATTGCATTAAATTGGCCAAAGAA
TTTGCATCACAGGAGTATTTGCTTGGGTTAAATAATGAATTC
CitationJhingory S, Wu CY, Taneyhill LA. Novel insight into the function and regulation of αN-catenin by Snail2 during chick neural crest cell migration. Dev Biol. 2010 August 15; 344(2): 896–910.
CopyrightCopyright © 2010 Published by Elsevier Inc
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205136.1). 5’-CGTTGCAGAAGTCATACTCCCTCA-3’ was "designed to target the aN-Catenin"
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 8
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
stage 9
stage 9
stage 9
Neural Plate/Tube
HH 8+
HH stage 8+
HH stage 9- (6ss)

Mouse

EmageMGI:88275
MGI GXDMGI:88275

Frog

Xenbase5955200

Fruit Fly

BDGPFBgn0010215

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-060815-3
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