GEISHA - A Chicken Embryo Gene Expression Database
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_

NTRK3
neurotrophic receptor tyrosine kinase 3

Gene
Official SymbolNTRK3
Official Full Nameneurotrophic receptor tyrosine kinase 3
CGNC ID49641
also known asTRKC, NT-3 growth factor receptor|neurotrophic tyrosine kinase, receptor, type 3|trk-C|trkC tyrosine kinase|tyrosine kinase C receptor, TrkC receptor, high-affinity neurotrophin receptor, Neurotrophic tyrosine kinase receptor type 3), TrkC tyrosine kinase, Trk-C, NT-3 growth factor receptor precursor
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205169
PolypeptideNP_990500
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.509
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4916ENSG00000140538MIM:191316
Mouse18213All phenotypic alleles (8):Targeted, knock-out(3) Targeted, other(5) MGI:97385
Xenopus100487541489712
Zebrafish568668, 568668, 798577ZDB-GENE-010126-3, ZDB-GENE-010126-3, ZDB-GENE-010126-4ZFIN:ZDB-GENE-010126-3, ZFIN:ZDB-GENE-010126-3, ZFIN:ZDB-GENE-010126-4
Gene Ontology
Molecular FunctionATP binding, neurotrophin receptor activity, transmembrane receptor protein tyrosine kinase activity
Biological Processcell differentiation, nervous system development, more...transmembrane receptor protein tyrosine kinase signaling pathway
Cellular Componentintegral component of plasma membrane
Links to other databases
Entrez Gene396081
Ensembl GeneENSGALG00000006793
KEGGgga:396081

Entry 1

GEISHA IdTrkC.Bernd.2004Data SourcePublication
Complete cDNA Template Probeshow
GGCACGAGGCCCTAGCGGGATTACCGAGCCAGCTGCCAGCATGCATTTCATCTGCTGGAGGATTTTTGCATCTGATCGC
TTGAAGGTTTTGTTCAAGACAGACATCAATTGCAAGAAGCCGGATGATGGGAACCTCTTCCCTCTCTTGGAAGGGCAGG
ATTCAGGCAGCAGCAATGGCAACACGAGTATCAATATCACGGACATCTCAAGGAACATCACTTCCATACACATAGAGAA
CTGGAAGAACTTGCAGACGCTGAACGCTGTAGACATGGAGCTGTACACGGGACTTCAGAGGCTGACAATCAGGAACTCA
GGACTACGAAATATCCAGCCACGCGCCTTTGGGAAGAACCCTCACCTGCGCTACATAGACCTCTCTGGTAACCGGCTCA
CCACCCTGTCGTGGCAACTCTTCCAGACGCTGCGGCTCTTTGACCTGAGATTAGAGAGGAACCCTTTTAACTGCAGCTG
TGACATCCGCTGGATCCAGCTCTGGCAGGAGAAGGGCGAGGCCAACCTGCAGTCCCAGCAACTGCACTGCATGAACTTG
GACACAGCTGTCATCCTTTTGCGGAACATGAACATCACCCAGTGTGACCTCCCTGAGATCAGTGTAAGCCATGTGAACC
TGACGGTGCGGGAAGGGGAGAATGCTGTCATCACCTGCAATGGCTCAGGATCACCACTGCCCGACGTCGACTGGACGGT
GGCAGATCTGCATTCTATCAACACACACCAGACCAACCTCAACTGGACCAACGTTCATGCCATCAACCTGACCTTGGTG
AATGTCACCAGTGAGGACAATGGGTTCCTGCTTACCTGCATCGCTGAGAACGTGGTGGGGATGAGCAATGCCAGCGTTC
TGCTCACTGTCTACTATCCCCCTCGCATCCTAACTCTGGAGGAGCCGGTGCTGCACCTGGAGCACTGTATTGCCTTTGC
AGTGCATGGGAATCCAGCTCCTACCCTTCACTGGCTGCACAATGGCCAGGTCCTCCGGGAGACAGAGATTATCCACATG
GAGTTCTACCAACAAGGGGAAGTGTCTGAGGGTTGCCTTCTCTTCAACAAACCTACTCACTACAACAACGGCAACTACA
CGATTGTGGCCACCAACCAGCTGGGGTCAGCCAACCAGACCATCAAAGGACACTTCCTTGAGAAGCCCTTTCCAGAGAG
TACAGACAACTTTGTCTCAATCGGTGACTATGAAGTGAGTCCCACCCCACCAATCACTGTGACCCACAAACCAGAGGAG
GACACATTTGGGGTTTCCATAGCGGTTGGGCTAGCAGCTTTTGCTTGTGTCCTCTTGGTGGTCCTCTTTATTATGATCA
ACAAGTATGGCCGACGGTCCAAGTTTGGGATGAAAGGTCCCGTGGCAGTGATCAGCGGAGAGGAGGATTCTGCAGCCAC
TCACACATCAACCACGGATACGCGCTTCGTCACTGATGCTGGCCCGGATACGGTGGTGATCGGCATGACCCGCATCCCC
GTCATCGAAAACCCCCAGTACTTCCGACAAGGTCACAACTGCCACAAGCCAGACACGTATGTCCAGCATATTAAGAGAA
GAGACATCGTTTTGAAGAGGGAGCTGGGAGAAGGTGCCTTTGGGAAGGTGTTCTTGGCCGAGTGTTACAACCTCAGCCC
CACCAATGACAAAATGCTGGTGGCAGTGAAGGCGCTGAAAGACCCCACCTTGGCAGCCCGCAAGGATTTCCAGAGGGAG
GCAGAGCTGCTCACCAACCTGCAGCATGAGCACATTGTCAAGTTCTATGGTGTGTGTGGTGACGGTGACCCGCTCATCA
TGGTCTTCGAGTACATGAAGCATGGGGACCTGAACAAGTTCCTGAGGGCACATGGCCCAGATGCTATGATCCTCGTGGA
TGGGCAGCCTCGACAAGCCAAAGGGGAGCTAGGGCTATCCCAGATGCTCCACATCGCTAGCCAGATCGCCTCTGGAATG
GTGTACCTTGCCTCCCAGCACTTTGTCCATAGAGACCTGGCCACCAGGAACTGCTTGGTCGGAGCCAACCTGCTGGTGA
AGATTGGAGACTTTGGGATGTCAAGAGATGTCTACAGCACTGATTACTACAGGGTTGGAGGACACACCATGCTGCCTAT
CCGCTGGATGCCTCCGGAGAGCATCATGTACAGGAAGTTCACAACGGAGAGCGACGTCTGGAGCTTCGGGGTGATCCTC
TGGGAGATCTTCACCTATGGGAAGCAGCCGTGGTTTCAGCTCTCAAACACAGAGGTCATTGAGTGCATTACCCAAGGCC
GAGTTCTGGAAAGACCTCGAGTCTGCCCCAAGGAGGTATACGACATCATGTTGGGCTGTTGTCAGAGAGAACCTCAGCA
ACGGCTCAACATCAAGGAGATCTACAAGATCCTCCATGCTCTGGGCAAGGCCACACCAATCTACCTGGACATCCTTGGC
TAGCAGTGGCCACTCGTCAAAAGTCCCCAATCCTTCCTTCCGTCCTTCCTTCCCTCTCCCCTCCCAATTCCTTTGCCCC
TCAGCTCCCAAACAAACATCTTCATATAAACTCAAGTGCCTGCTACACATACAACACTGAAAACAAAACGAAACTAAAA
GCAAACCAACAAAATTCCCACAAAACGACGACCTGTAAGGCAGTTTGGCTTATATATATTTATAGGATATCTCTCTATA
TATAACTTCCACACCAATACAGAAAGACGCTGCCTCTACAGCCACAATCGCCCTACTACCAATAATACCATCAATCTCC
GCCCTAACGGCACTCATCCTATTCCTACTAACCATCCTAGAAGTGGCAGTAGCAATAATCCAAGCCTACGTCTTCGTCC
TCCTCCTAAGCCTCTACCTCGTGC
CitationBernd P, Miles K, Rozenberg I, Borghjid S, Kirby ML. Expression Neurotrophin-3 and TrkC Are Expressed in the Outflow Tract of the Developing Chicken Heart. Dev Dyn. 2004 Aug;230(4):767-72.
CopyrightWiley-Liss, Inc. 2004
CommentsPlasmids containing full-length (2.5 kb) chicken trkC cDNA were generously supplied by Dr. Thomas Large (Garner and Large, [1994]). At the time of posting, there was no 2.5kb transcript for this gene in the NCBI database. The sequence below was obtained from NCBI (acc #X59669).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-17
stage 17
stage 17
stage 17
Outflow Tract
not seen in this view
truncus arteriosus

Entry 2

GEISHA IdTRKC.Yang.2010Data SourcePublication
Complete cDNA Template Probeshow
ATGCTGCCTATCCGCTGGATGCCTCCGGAGAGCATCATGTACAGGAAGTTCACAACGGAGAGTGACGTCTGGAGCTTCG
GGGTGATCCTCTGGGAGATCTTCACCTATGGGAAGCAGCCGTGGTTTCAGCTCTCAAACACAGAGGTCATTGAGTGCAT
TACCCAAGGCCGAGTTCTGGAAAGACCTCGAGTCTGCCCCAAGGAGGTATACGACATCATGTTGGGCTGCTGGCAGAGA
GAACCTCAGCAACGGCTCAACATCAAGGAGATCTACAAGATCCTCCATGCTCTGGGCAAGGCCACACCAATCTACCTGG
ACATCCTTGGCTAGCAGTGGCCACTTGTCAAAAGTCCCCAATCCTTCCTTCCGTCCTTCCTTCCCTCTCCCCCTCCCAA
TTCCTTTGCCCCTCAGCTCCCAAACAAACATCTTCATATAAACTCAAGTGCCTGCTACACATACAACACTGAAAACAAA
ACGAAACTAAAAGCAAACCAACAAAATTCCCACAAAACGACGACCTGT
CitationYang M, Cagle MC, Honig MG. Identification of cerebellin2 in chick and its preferential expression by subsets of developing sensory neurons and their targets in the dorsal horn. J Comp Neurol. 2010 Jul 15;518(14):2818-40.
CopyrightCopyright © 2010 Wiley-Liss, Inc.
CommentsThe cDNA template used to generate the probe was obtained by PCR as described by authors.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 30
stage 30
Spinal Cord
Spinal Ganglia and Nerves
 

Entry 3

GEISHA IdTRKC.Aburto.2012Data SourcePublication
Complete cDNA Template Probeshow
GCGATCCTCCGGAGCGGCTGCGGGGAGCGGCGGGCGGCCGGGCCAGCATGCATCCCCGCCCGCTGCCGCTGCCCTAGCG
GGATTACCGAGCCAGCTGCCAGCATGATTTCATCTGCTGGAGGATTTTTGCATCTGATCGCTTGAAGGTTTTGTTGTGT
GTGTTTTTTTTTTCTTCCTCCTTTTTTTTTTCCTCCCTCTGTCTTTGTTTCCTTCCCCCCTTTTTCCCCCCCCTTCCCC
TCCCTCCGTCCCCCCTTTCCTCCTCCTCCTCTTTTTTAGAAGCAGCAATCGGAGATGGATGTCTCTCTTTGCCCTACCA
AGTGCACTTTCTGGAGGGTATTTTTGCTCTGGAGCATTTGGGGAGACTATCTGCTTTCGGTGCTGGCTTGCCCTGCTAA
TTGTCTTTGCAGCAAGACAGACATCAATTGCAAGAAGCCGGATGATGGGAACCTCTTCCCTCTCTTGGAAGGGCAGGAT
TCAGGCAGCAGCAATGGCAACACGAGTATCAATATCACGGACATCTCAAGGAACATCACTTCCATACACATAGAGAACT
GGAAGAACTTGCAGACGCTGAACGCTGTAGACATGGAGCTGTACACGGGACTTCAGAGGCTGACAATCAGGAACTCAGG
ACTACGAAATATCCAGCCACGCGCCTTTGCGAAGAACCCTCACCTGCGCTACATAGACCTCTCTGGTAACCGGCTCACC
ACCCTGTCGTGGCAACTCTTCCAGACGCTGCGGCTCTTTGACCTGAGATTAGAGAGGAACCCTTTTAACTGCAGCTGTG
ACATCCGCTGGATCCAGCTCTGGCAGGAGAAGGGCGAGGCCAACCTGCAGTCCCAGCAACTGCACTGCATGAACTTGGA
CACGGCTGTCATCCTTTTGCGGAACATGAACATCACCCAGTGTGACCTCCCTGAGATCAGTGTAAGCCATGTGAACCTG
ACGGTGCGGGAAGGGGAGAATGCTGTCATCACCTGCAATGGCTCAGGATCACCACTGCCCGACGTCGACTGGACGGTGG
CAGATCTGCATTCTATCAACACACACCAGACCAACCTCAACTGGACCAACGTTCATGCCATCAACCTGACCTTGGTGAA
TGTCACCAGTGAGGACAATGGGTTCCTGCTTACCTGCATCGCTGAGAACGTGGTGGGGATGAGCAATGCCAGCGTTCTG
CTCACTGTCTACTATCCCCCTCGCATCCTAACTCTGGAGGAGCCGGTGCTGCACCTGGAGCACTGTATTGCCTTTGCAG
TGCATGGGAATCCAGCTCCTACCCTTCACTGGCTGCACAATGGCCAGGTCCTCCGGGAGACAGAGATTATCCACATGGA
GTTCTACCAACAAGGGGAAGTGTCTGAGGGTTGCCTTCTCTTCAACAAACCTACTCACTACAACAACGGCAACTACACG
ATTGTGGCCACCAACCAGCTGGGGTCAGCCAACCAGACCATCAAAGGACACTTCCTTGAGAAGCCCTTTCCAGAGAGTA
CAGACAACTTTGTCTCAATCGGTGACTATGAAGTGAGTCCCACCCCACCAATCACTGTGACCCACAAACCAGAGGAGGA
CACGTTTGGGGTTTCCATAGCGGTTGGGCTAGCAGCTTTTGCTTGTGTCCTCTTGGTGGTCCTCTTTATTATGATCAAC
AAGTATGGCCGACGGTCCAAGTTTGGGATGAAAGGTCCCGTGGCAGTGATCAGCGGAGAGGAGGATTCTGCCAGCCCAC
TCCACCACATCAACCACGGCATCACGACGCCTTCGTCACTGGATGCTGGCCCGGATACGGTGGTGATCGGCATGACCCG
CATCCCCGTCATCGAGAACCCCCAGTACTTCCGACAAGGTCACAACTGCCACAAGCCAGACACGTATGTCCAGCATATT
AAGAGAAGAGACATCGTTTTGAAGAGGGAGCTGGGAGAAGGTGCCTTTGGGAAGGTGTTCTTGGCCGAGTGTTACAACC
TCAGCCCCACCAATGACAAAATGCTGGTGGCAGTGAAGGCGCTGAAAGACCCCACCTTGGCAGCCCGCAAGGATTTCCA
GAGGGAGGCAGAGCTGCTCACCAACCTGCAGCATGAGCACATTGTCAAGTTCTATGGTGTGTGTGGTGACGGTGACCCG
CTCATCATGGTCTTCGAGTACATGAAGCATGGGGACCTGAACAAGTTCCTGAGGGCACATGGCCCAGATGCTATGATCC
TCGTGGATGGGCAGCCTCGACAAGCCAAAGGGGAGCTAGGGCTATCCCAGATGCTCCACATCGCTAGCCAGATCGCCTC
TGGAATGGTGTACCTTGCCTCCCAGCACTTTGTCCATAGAGACCTGGCCACCAGGAACTGCTTGGTCGGAGCCAACCTG
CTGGTGAAGATTGGAGACTTTGGGATGTCAAGAGATGTCTACAGCACTGATTACTACAGGGAAGGGCCGCGTCCGAAGG
GCCAGCTCAGCACAGCGTGGCAGCGACACAGACTGGCACCGCCGGCAGCTGCAACAGTTGGAGGACACACCATGCTGCC
TATCCGCTGGATGCCTCCGGAGAGCATCATGTACAGGAAGTTCACAACGGAGAGTGACGTCTGGAGCTTCGGGGTGATC
CTCTGGGAGATCTTCACCTATGGGAAGCAGCCGTGGTTTCAGCTCTCAAACACAGAGGTCATTGAGTGCATTACCCAAG
GCCGAGTTCTGGAAAGACCTCGAGTCTGCCCCAAGGAGGTATACGACATCATGTTGGGCTGCTGGCAGAGAGAACCTCA
GCAACGGCTCAACATCAAGGAGATCTACAAGATCCTCCATGCTCTGGGCAAGGCCACACCAATCTACCTGGACATCCTT
GGCTAGCAGTGGCCACTTGTCAAAAGTCCCCAATCCTTCCTTCCGTCCTTCCTTCCCTCTCCCCCTCCCAATTCCTTTG
CCCCTCAGCTCCCAAACAAACATCTTCATATAAACTCAAGTGCCTGCTACACATACAACACTGAAAACAAAACGAAACT
AAAAGCAAACCAACAAAATTCCCACAAAACGACGACCTGTAAGGCAGTTTGGCTTATATATATTTATAGATATCTCTCT
ATATATAACTTCCACACCAATACAGAAAGACGCTGCTGTTACAGAAAAATTATAAGACTTAAAAAAAAAAAAAAAA
CitationAburto MR, Magariños M, Leon Y, Varela-Nieto I, Sanchez-Calderon H. AKT signaling mediates IGF-I survival actions on otic neural progenitors. PLoS One. 2012;7(1):e30790.
CopyrightCopyright: © 2012 Aburto et al.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_205169.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19
stage 19
stage 19
Ear/Otic Placode
 

Entry 4

GEISHA IdTRKC.Bell.2008Data SourcePublication
Complete cDNA Template Probeshow
GCGATCCTCCGGAGCGGCTGCGGGGAGCGGCGGGCGGCCGGGCCAGCATGCATCCCCGCCCGCTGCCGCTGCCCTAGCG
GGATTACCGAGCCAGCTGCCAGCATGATTTCATCTGCTGGAGGATTTTTGCATCTGATCGCTTGAAGGTTTTGTTGTGT
GTGTTTTTTTTTTCTTCCTCCTTTTTTTTTTCCTCCCTCTGTCTTTGTTTCCTTCCCCCCTTTTTCCCCCCCCTTCCCC
TCCCTCCGTCCCCCCTTTCCTCCTCCTCCTCTTTTTTAGAAGCAGCAATCGGAGATGGATGTCTCTCTTTGCCCTACCA
AGTGCACTTTCTGGAGGGTATTTTTGCTCTGGAGCATTTGGGGAGACTATCTGCTTTCGGTGCTGGCTTGCCCTGCTAA
TTGTCTTTGCAGCAAGACAGACATCAATTGCAAGAAGCCGGATGATGGGAACCTCTTCCCTCTCTTGGAAGGGCAGGAT
TCAGGCAGCAGCAATGGCAACACGAGTATCAATATCACGGACATCTCAAGGAACATCACTTCCATACACATAGAGAACT
GGAAGAACTTGCAGACGCTGAACGCTGTAGACATGGAGCTGTACACGGGACTTCAGAGGCTGACAATCAGGAACTCAGG
ACTACGAAATATCCAGCCACGCGCCTTTGCGAAGAACCCTCACCTGCGCTACATAGACCTCTCTGGTAACCGGCTCACC
ACCCTGTCGTGGCAACTCTTCCAGACGCTGCGGCTCTTTGACCTGAGATTAGAGAGGAACCCTTTTAACTGCAGCTGTG
ACATCCGCTGGATCCAGCTCTGGCAGGAGAAGGGCGAGGCCAACCTGCAGTCCCAGCAACTGCACTGCATGAACTTGGA
CACGGCTGTCATCCTTTTGCGGAACATGAACATCACCCAGTGTGACCTCCCTGAGATCAGTGTAAGCCATGTGAACCTG
ACGGTGCGGGAAGGGGAGAATGCTGTCATCACCTGCAATGGCTCAGGATCACCACTGCCCGACGTCGACTGGACGGTGG
CAGATCTGCATTCTATCAACACACACCAGACCAACCTCAACTGGACCAACGTTCATGCCATCAACCTGACCTTGGTGAA
TGTCACCAGTGAGGACAATGGGTTCCTGCTTACCTGCATCGCTGAGAACGTGGTGGGGATGAGCAATGCCAGCGTTCTG
CTCACTGTCTACTATCCCCCTCGCATCCTAACTCTGGAGGAGCCGGTGCTGCACCTGGAGCACTGTATTGCCTTTGCAG
TGCATGGGAATCCAGCTCCTACCCTTCACTGGCTGCACAATGGCCAGGTCCTCCGGGAGACAGAGATTATCCACATGGA
GTTCTACCAACAAGGGGAAGTGTCTGAGGGTTGCCTTCTCTTCAACAAACCTACTCACTACAACAACGGCAACTACACG
ATTGTGGCCACCAACCAGCTGGGGTCAGCCAACCAGACCATCAAAGGACACTTCCTTGAGAAGCCCTTTCCAGAGAGTA
CAGACAACTTTGTCTCAATCGGTGACTATGAAGTGAGTCCCACCCCACCAATCACTGTGACCCACAAACCAGAGGAGGA
CACGTTTGGGGTTTCCATAGCGGTTGGGCTAGCAGCTTTTGCTTGTGTCCTCTTGGTGGTCCTCTTTATTATGATCAAC
AAGTATGGCCGACGGTCCAAGTTTGGGATGAAAGGTCCCGTGGCAGTGATCAGCGGAGAGGAGGATTCTGCCAGCCCAC
TCCACCACATCAACCACGGCATCACGACGCCTTCGTCACTGGATGCTGGCCCGGATACGGTGGTGATCGGCATGACCCG
CATCCCCGTCATCGAGAACCCCCAGTACTTCCGACAAGGTCACAACTGCCACAAGCCAGACACGTATGTCCAGCATATT
AAGAGAAGAGACATCGTTTTGAAGAGGGAGCTGGGAGAAGGTGCCTTTGGGAAGGTGTTCTTGGCCGAGTGTTACAACC
TCAGCCCCACCAATGACAAAATGCTGGTGGCAGTGAAGGCGCTGAAAGACCCCACCTTGGCAGCCCGCAAGGATTTCCA
GAGGGAGGCAGAGCTGCTCACCAACCTGCAGCATGAGCACATTGTCAAGTTCTATGGTGTGTGTGGTGACGGTGACCCG
CTCATCATGGTCTTCGAGTACATGAAGCATGGGGACCTGAACAAGTTCCTGAGGGCACATGGCCCAGATGCTATGATCC
TCGTGGATGGGCAGCCTCGACAAGCCAAAGGGGAGCTAGGGCTATCCCAGATGCTCCACATCGCTAGCCAGATCGCCTC
TGGAATGGTGTACCTTGCCTCCCAGCACTTTGTCCATAGAGACCTGGCCACCAGGAACTGCTTGGTCGGAGCCAACCTG
CTGGTGAAGATTGGAGACTTTGGGATGTCAAGAGATGTCTACAGCACTGATTACTACAGGGAAGGGCCGCGTCCGAAGG
GCCAGCTCAGCACAGCGTGGCAGCGACACAGACTGGCACCGCCGGCAGCTGCAACAGTTGGAGGACACACCATGCTGCC
TATCCGCTGGATGCCTCCGGAGAGCATCATGTACAGGAAGTTCACAACGGAGAGTGACGTCTGGAGCTTCGGGGTGATC
CTCTGGGAGATCTTCACCTATGGGAAGCAGCCGTGGTTTCAGCTCTCAAACACAGAGGTCATTGAGTGCATTACCCAAG
GCCGAGTTCTGGAAAGACCTCGAGTCTGCCCCAAGGAGGTATACGACATCATGTTGGGCTGCTGGCAGAGAGAACCTCA
GCAACGGCTCAACATCAAGGAGATCTACAAGATCCTCCATGCTCTGGGCAAGGCCACACCAATCTACCTGGACATCCTT
GGCTAGCAGTGGCCACTTGTCAAAAGTCCCCAATCCTTCCTTCCGTCCTTCCTTCCCTCTCCCCCTCCCAATTCCTTTG
CCCCTCAGCTCCCAAACAAACATCTTCATATAAACTCAAGTGCCTGCTACACATACAACACTGAAAACAAAACGAAACT
AAAAGCAAACCAACAAAATTCCCACAAAACGACGACCTGTAAGGCAGTTTGGCTTATATATATTTATAGATATCTCTCT
ATATATAACTTCCACACCAATACAGAAAGACGCTGCTGTTACAGAAAAATTATAAGACTTAAAAAAAAAAAAAAAA
CitationBell D, Streit A, Gorospe I, Varela-Nieto I, Alsina B, Giraldez F. Spatial and temporal segregation of auditory and vestibular neurons in the otic placode. Dev Biol. 2008 Oct 1;322(1):109-20. doi: 10.1016/j.ydbio.2008.07.011. Epub 2008 Jul 19.
CopyrightCopyright © 2013 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_205169.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
Ear/Otic Placode
 
19-24
stage 19
stage 20
stage 24
stage 24
Ear/Otic Placode
 

Entry 5

GEISHA IdTRKC.Bernd.1999Data SourcePublication
Complete cDNA Template Probeshow
GCGATCCTCCGGAGCGGCTGCGGGGAGCGGCGGGCGGCCGGGCCAGCATGCATCCCCGCCCGCTGCCGCTGCCCTAGCG
GGATTACCGAGCCAGCTGCCAGCATGATTTCATCTGCTGGAGGATTTTTGCATCTGATCGCTTGAAGGTTTTGTTGTGT
GTGTTTTTTTTTTCTTCCTCCTTTTTTTTTTCCTCCCTCTGTCTTTGTTTCCTTCCCCCCTTTTTCCCCCCCCTTCCCC
TCCCTCCGTCCCCCCTTTCCTCCTCCTCCTCTTTTTTAGAAGCAGCAATCGGAGATGGATGTCTCTCTTTGCCCTACCA
AGTGCACTTTCTGGAGGGTATTTTTGCTCTGGAGCATTTGGGGAGACTATCTGCTTTCGGTGCTGGCTTGCCCTGCTAA
TTGTCTTTGCAGCAAGACAGACATCAATTGCAAGAAGCCGGATGATGGGAACCTCTTCCCTCTCTTGGAAGGGCAGGAT
TCAGGCAGCAGCAATGGCAACACGAGTATCAATATCACGGACATCTCAAGGAACATCACTTCCATACACATAGAGAACT
GGAAGAACTTGCAGACGCTGAACGCTGTAGACATGGAGCTGTACACGGGACTTCAGAGGCTGACAATCAGGAACTCAGG
ACTACGAAATATCCAGCCACGCGCCTTTGCGAAGAACCCTCACCTGCGCTACATAGACCTCTCTGGTAACCGGCTCACC
ACCCTGTCGTGGCAACTCTTCCAGACGCTGCGGCTCTTTGACCTGAGATTAGAGAGGAACCCTTTTAACTGCAGCTGTG
ACATCCGCTGGATCCAGCTCTGGCAGGAGAAGGGCGAGGCCAACCTGCAGTCCCAGCAACTGCACTGCATGAACTTGGA
CACGGCTGTCATCCTTTTGCGGAACATGAACATCACCCAGTGTGACCTCCCTGAGATCAGTGTAAGCCATGTGAACCTG
ACGGTGCGGGAAGGGGAGAATGCTGTCATCACCTGCAATGGCTCAGGATCACCACTGCCCGACGTCGACTGGACGGTGG
CAGATCTGCATTCTATCAACACACACCAGACCAACCTCAACTGGACCAACGTTCATGCCATCAACCTGACCTTGGTGAA
TGTCACCAGTGAGGACAATGGGTTCCTGCTTACCTGCATCGCTGAGAACGTGGTGGGGATGAGCAATGCCAGCGTTCTG
CTCACTGTCTACTATCCCCCTCGCATCCTAACTCTGGAGGAGCCGGTGCTGCACCTGGAGCACTGTATTGCCTTTGCAG
TGCATGGGAATCCAGCTCCTACCCTTCACTGGCTGCACAATGGCCAGGTCCTCCGGGAGACAGAGATTATCCACATGGA
GTTCTACCAACAAGGGGAAGTGTCTGAGGGTTGCCTTCTCTTCAACAAACCTACTCACTACAACAACGGCAACTACACG
ATTGTGGCCACCAACCAGCTGGGGTCAGCCAACCAGACCATCAAAGGACACTTCCTTGAGAAGCCCTTTCCAGAGAGTA
CAGACAACTTTGTCTCAATCGGTGACTATGAAGTGAGTCCCACCCCACCAATCACTGTGACCCACAAACCAGAGGAGGA
CACGTTTGGGGTTTCCATAGCGGTTGGGCTAGCAGCTTTTGCTTGTGTCCTCTTGGTGGTCCTCTTTATTATGATCAAC
AAGTATGGCCGACGGTCCAAGTTTGGGATGAAAGGTCCCGTGGCAGTGATCAGCGGAGAGGAGGATTCTGCCAGCCCAC
TCCACCACATCAACCACGGCATCACGACGCCTTCGTCACTGGATGCTGGCCCGGATACGGTGGTGATCGGCATGACCCG
CATCCCCGTCATCGAGAACCCCCAGTACTTCCGACAAGGTCACAACTGCCACAAGCCAGACACGTATGTCCAGCATATT
AAGAGAAGAGACATCGTTTTGAAGAGGGAGCTGGGAGAAGGTGCCTTTGGGAAGGTGTTCTTGGCCGAGTGTTACAACC
TCAGCCCCACCAATGACAAAATGCTGGTGGCAGTGAAGGCGCTGAAAGACCCCACCTTGGCAGCCCGCAAGGATTTCCA
GAGGGAGGCAGAGCTGCTCACCAACCTGCAGCATGAGCACATTGTCAAGTTCTATGGTGTGTGTGGTGACGGTGACCCG
CTCATCATGGTCTTCGAGTACATGAAGCATGGGGACCTGAACAAGTTCCTGAGGGCACATGGCCCAGATGCTATGATCC
TCGTGGATGGGCAGCCTCGACAAGCCAAAGGGGAGCTAGGGCTATCCCAGATGCTCCACATCGCTAGCCAGATCGCCTC
TGGAATGGTGTACCTTGCCTCCCAGCACTTTGTCCATAGAGACCTGGCCACCAGGAACTGCTTGGTCGGAGCCAACCTG
CTGGTGAAGATTGGAGACTTTGGGATGTCAAGAGATGTCTACAGCACTGATTACTACAGGGAAGGGCCGCGTCCGAAGG
GCCAGCTCAGCACAGCGTGGCAGCGACACAGACTGGCACCGCCGGCAGCTGCAACAGTTGGAGGACACACCATGCTGCC
TATCCGCTGGATGCCTCCGGAGAGCATCATGTACAGGAAGTTCACAACGGAGAGTGACGTCTGGAGCTTCGGGGTGATC
CTCTGGGAGATCTTCACCTATGGGAAGCAGCCGTGGTTTCAGCTCTCAAACACAGAGGTCATTGAGTGCATTACCCAAG
GCCGAGTTCTGGAAAGACCTCGAGTCTGCCCCAAGGAGGTATACGACATCATGTTGGGCTGCTGGCAGAGAGAACCTCA
GCAACGGCTCAACATCAAGGAGATCTACAAGATCCTCCATGCTCTGGGCAAGGCCACACCAATCTACCTGGACATCCTT
GGCTAGCAGTGGCCACTTGTCAAAAGTCCCCAATCCTTCCTTCCGTCCTTCCTTCCCTCTCCCCCTCCCAATTCCTTTG
CCCCTCAGCTCCCAAACAAACATCTTCATATAAACTCAAGTGCCTGCTACACATACAACACTGAAAACAAAACGAAACT
AAAAGCAAACCAACAAAATTCCCACAAAACGACGACCTGTAAGGCAGTTTGGCTTATATATATTTATAGATATCTCTCT
ATATATAACTTCCACACCAATACAGAAAGACGCTGCTGTTACAGAAAAATTATAAGACTTAAAAAAAAAAAAAAAA
CitationBernd P, Li R. Differential expression of trkC mRNA in the chicken embryo from gastrulation to development of secondary brain vesicles. Brain Res Dev Brain Res. 1999 Sep 6;116(2):205-9.
CopyrightCopyright © 1999 Elsevier Science B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205169). trkC is also known as NTRK3 in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
Unlabeled
 
4-6
stage 4
stage 4
stage 5
stage 5
stage 6
stage 6
Endoderm
Epiblast
Headfold
Hensen's Node
Mesoderm
Neural Plate/Tube
Primitive Streak
extraembryonic ectoderm
 
7-12
stage 8
stage 8
stage 9
stage 9
stage 11
stage 11
Forebrain
Neural Plate/Tube
Rhombomeres
Somites
 
13-18
stage 15
stage 15
stage 15
stage 15
stage 15
stage 18
Cranial Ganglia
Ear/Otic Placode
Rhombomeres
 
31-44
stage 44
stage 44
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.509

Mouse

EmageMGI:97385
EurexpressMGI:97385
MGI GXDMGI:97385

Frog

Xenbase489712

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-010126-3, ZDB-GENE-010126-3, ZDB-GENE-010126-4
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