GEISHA - A Chicken Embryo Gene Expression Database
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MATN2
matrilin 2

Gene
Official SymbolMATN2
Official Full Namematrilin 2
CGNC ID10792
also known asmatrilin-2
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_424219
PolypeptideXP_424219
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.55609
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus595001, 379491957558
Zebrafish403023ENSDARG00000030215ZDB-GENE-050307-3ZFIN:ZDB-GENE-050307-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene426584
Ensembl Gene
KEGGgga:426584
GEISHA IdMATN2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCTCCCTGTAGGACATTTTACCCG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTCTTCCCATCCGCATCAAGCcDNA Template Length862
Forward cDNA Template Probeshow
ATACCCTTCGTTACACTGGACAGGACGTAAGACCCAGGGCGNGGTTCACACAAATCTGCTCACAGNTTATGCCTTCTCC
ACAGCGCAGAGGTCTTGAGTGCTGCAAGTCCTCTGGTCAGCGTTCAGGATGTAACCTTGTTTACATCTGCATACATAGG
AGCCTGGNGTATTTATGCAGAAATGATCACAGCGATGCTCAGCTATACTGCACATATGGGGCACACAAAGTTTAGTCTG
GAAGACAGAGGTCAGCGTTTCAATCTGACTGAANTTAGCAACTAGAAAGATGTGCTCTTCGTGTGGCTCACTCCCAATG
GATTTGAGTGTGTTCATATCCACTCTTCCCACTCCAATGGCAAAAATCAGAATTCCAGAGTTGCGAGCTTTAGCAGCAA
TTTCTCCCACTGGATCCTGCGGTCTCCCATCTGTCACTATCATGATAATGCGAGGCACGTTTTGGTTCAGAGGTCGAGC
TCCTTCTGACTCTGAAAACGCGATGTTCACAGCATACTGGATAGCCAGTCCCGTCATGGTGCCAGTTGCCAGGTGCATC
ATTCTCCTCACTGCTCTCTCGATCTCCTGTTTCCTCCTAAACGTCTTCAGAGAGAANTCATGTTTGACAGTGCTGCCAT
ACTGAATCAGGCCTACTCGAGTGGCATCAGGACTGACGTCCAGGAACTGCAAGATCGTTAAAATGAACTCTTTCACTTT
TTCAAAGTCATAGGGACGTACGCTGCGAGAGCTATCAATGATGAAGACAAGGTCCAGACGTTTGTTGTTACAAGTATTT
TCTAGTAGAGATTGAGAGCTAACATCCCTTCTTCGGGTAAAATGTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
 
7-12
stage 7
stage 8
stage 9
Endoderm
Extraembryonic
Headfold
Heart Tube
Hensen's Node
Lateral Plate Mesoderm
Neural Plate/Tube
extremely weak staining
13-18
stage 13
stage 13
stage 14
stage 14
stage 14
stage 14
stage 16
stage 16
stage 16
stage 16
Sclerotome
Sinus Venosus
Spinal Ganglia and Nerves
 
19-24
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
stage 20
Allantois
Ear/Otic Placode
Foregut
Lung
Mesonephros
Nasal Placode/Nerve
Rhombomeres
Sclerotome
Sinus Venosus
Spinal Ganglia and Nerves
 
25
stage 25
stage 25
stage 25
stage 25
stage 25
Allantois
Dermomyotome
Foregut
Hindgut
Leg Mesenchyme
Lung
Mesonephros
Myotome
Nasal Placode/Nerve
Nephric Ducts
Sclerotome
Spinal Ganglia and Nerves
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.55609

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase957558

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050307-3
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