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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ZIC2
Zic family member 2

Gene

Official Symbol	ZIC2
Official Full Name	Zic family member 2
CGNC ID	53242
also known as	zinc finger protein ZIC 2\|zinc finger protein Zic2
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI

Sequence Information

Genomic
RNA	XM_003640545
Polypeptide	XP_003640593

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	428021
Ensembl Gene	ENSGALG00000026237
KEGG	gga:428021

Entry 1

GEISHA Id	ZIC2.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GGACTCTGCGCTGCCCGGGCTCCGGCTCCGGCTCCGGCGGCGGCGGCGGCGCGGCCGTGCGGGCGGAGGCGGGGACGCC GCGGCTGCCGGGGGGAAGCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCCCGCGCCGGGCGGGCGGCGGAGC GGCGGATCGGAGCGGCGGAGCGGCGCGGCGCGGCGCGGCACGGCCATGCTGCTGGACGCCGGCCCGCAGTTCCCGGCGC TCGGCGTGGGCACCTTCGCCCGGCACCACCACTCGGCCGCGGCCGAGATGCAGGAGCGGGAGCTGAGCCTGGCGGCGCA GAACGGCTTCGTGGACTCGGCGCACATGGGCGCCTTCAAGCTGAACGCCGGAGCCCACGAGCTGTCCCCGGGGCAGAGC TCGGCGTTCACCTCGCAGGCGCCCGGCTACCCCGCGGCCGCGCTGGGGCCGCACGCCGCGCACGTCGGCTCGTACTCGG GGCCGCCCTTCAACTCCACCCGGGACTTCTTGTTTCGCAGCCGCGGCTTCGGGGAGGCGGCGGCGGGCGGCGGGCAGCA CGGCATCTTCGGGCCGGCGGCCGGCGGCCTGCACCACCCGCACACGGACGCTCAGAGCCACCTCCTGTTCCCCGGCATC CACGAGCAGCACGGCCCGCACGCCTCGCAGAACGTCCTCAACGGGCAGATGCGGCTGGGGCTGCCCGGGGAGGTGTTCG CCCGCTCCGAGCAGTACCGCCAGGTCGCCAGCCCCAGGACTGACCCCTACGCGGCGGCGCAGCTGCACAACCAGTACGG CCCCATGAATATGAACGTGGGCATGAACGTGGCGGCCCACCACCACCACCACCCCGGTGCCTTTTTCCGCTACATGCGG CAGCAGTGCATCAAGCAGGAGCTGATCTGCAAGTGGATCGACCCCGAGCAGCTGAGCAACCCCAAAAAAAGTTGCAATA AAACTTTCAGCACCATGCACGAGCTGGTCACCCACGTCTCGGTGGAGCACGTCGGGGGGCCCGAGCAGAGCAACCACGT CTGCTACTGGGAGGAGTGTCCCCGCGAGGGCAAGCCCTTCAAGGCCAAGTACAAACTGGTCAACCACATCCGCGTGCAC ACGGGCGAGAAGCCCTTCCCCTGCCCCTTCCCCGGCTGCGGGAAGGTCTTCGCCAGGTCGGAGAACCTCAAGATCCACA AACGGACGCACACAGGGGAGAAGCCCTTCCAGTGCGAGTTCGAGGGCTGCGACCGGCGCTTCGCCAACAGCAGCGACCG CAAGAAGCACATGCACGTGCACACGTCGGACAAGCCGTACCTGTGCAAGATGTGCGACAAGTCCTACACGCACCCCAGC TCCCTGCGGAAGCACATGAAGGTGCACGAGTCGTCCCCGCAAGGCTCCGAGTCCTCGCCGGCCGCCAGCTCCGGCTACG AGTCCTCCACGCCCCCGGGGCTGGTGTCCCCCAGCGCCGAGCCGCAGAGCTCCACCAATCTCTCCCCGGCGGCGGCGGC CGCGGCCGCGGCGGCGGCGGCGGCGGCCGTGACCGCCGCGCACCGGAGCGGCGGCGGCGGAGGAGGAGGAGGGAGCGGC GGCGGCGGCGGCGGCGGCCACGGCGGCCTCTCCTCCAACTTCAACGAGTGGTACGTGTAGGGCCGCCGGACTGCTCTGC GGCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCATCCCGGGCCGGAGGAAGCGCTCCCGGAGCCCGCTCCGCACGGAG CTCCCCGCGCCGCCGCCGGCCCGCGGCCGTCTGTCGGAATCGTTTCTGTTCGGTTTTGGTTTTTTTTTTTTTTTCTTTT TTTTTTTTTTTTTAAATTCCTCTTATTATTTACGAACGCTTTAAACCGGCCAAAAAAAAAAAAAAAAAAAAGGAAAAAA AAAAAAAAAAAGAAATTCCTATGTAAGTGCGTGCTGGGAAACGCGAGGGAACAACTCACGAAAGAGAGGAACGGAAAGG AGAAGAAGAAGAAGAAGAAGAAGAAGAGGGGGGATAAACCGACGCGACGCGGCGCCCGGCGGAAGGCCCCGGGGCGGCG GACAAAGCAGCGCCGCGGCCCGGCCGGCCCTGCAGAGCCCTCCTCTCCCTCCTCCTTCGATTTCCCTCCGAAGAAGCGA AGGACTTTGTTTCTTTTCTTCCTCACCCCCCCTCTTTTTATTTTTTTTTTAGATCGCCCTTAAAAAAAAAAACAACAAA AAAAAAACCAACAAAAAACCCCACTAAATAACGTGGAAGGGGGAAAAAAAAACAAAACAAAACAAAACAAAAAAGCGCA AACAAAACCCCAGAAATGGTTTCTTTTGTACTCGTGATCTCTTGAATATCGTGTTCCTTTCCAAGAGGCGACTTGATTG TAAAACCGCATCTCTCACCGTACCCGGGGAAGAAGTGCCGTGCCAAAGTCCCGTCCCGCCCCGCGCTGTCCGCTGTTAG CTGGGTGCCGTGTGCTGTCGTAGTGCTTTGCCGTCCGCTCCCTTTAGTCCTGGTGGGAAGGTTGTGAGGAAATCAGCGT CGTGCCGTAGGCTTCCCGTCCACCGCCCTCCTCCTGTAAATACCCGTGACCGTATTTATCCATTTGTAATTAAATTATG GTATTAACTTGCTACAGAGGAAACGGTATTTATAAAGAATGTTTCTTAACTATAAATATGTACAATTGTGAGCATAAAC TGTTTCAGATTTTTTTATTTGGAGGTTTAAGTGGTTTCATCCTTTCTCGTGATATGTTTGGAGAGTAATGCGTACAGAA CTATAATAAAACGTGTTGAAGCTGCA
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_015274914 ).

Stage

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Location (click to highlight)

Comments (click to highlight)

X-XIV

stage XII

Area Opaca
Kohler's Sickle

area opaca / Koller's sickle

1-3

stage 3

Mesoderm
Primitive Streak

4-6

stage 6

Headfold
Primitive Streak

head fold / primitive streak

7-8

stage 8

Neural Plate/Tube
Primitive Streak
Somites

neural plate / somites / primitive streak

all

Entry 2

GEISHA Id	ZIC2.Lida.2020	Data Source	Publication
Complete cDNA Template Probe	show `GAGGGGGGATAAACCGACGCGACGCGGCGCCCGGCGGAAGGCCCCGGGGCGGCGGACAAAGCAGCGCCGCGGCCCGGCC GGCCCTGCAGAGCCCTCCTCTCCCTCCTCCTTCGATTTCCCTCCGAAGAAGCGAAGGACTTTGTTTCTTTTCTTCCTCA CCCCCCCTCTTTTTATTTTTTTTTTAGATCGCCCTTAAAAAAAAAAACAACAAAAAAAAAACCAACAAAAAACCCCACT AAATAACGTGGAAGGGGGAAAAAAAAACAAAACAAAACAAAACAAAAAAGCGCAAACAAAACCCCAGAAATGGTTTCTT TTGTACTCGTGATCTCTTGAATATCGTGTTCCTTTCCAAGAGGCGACTTGATTGTAAAACCGCATCTCTCACCGTACCC GGGGAAGAAGTGCCGTGCCAAAGTCCCGTCCCGCCCCGCGCTGTC`
Citation	Iida H, Furukawa Y, Teramoto M, Suzuki H, Takemoto T, Uchikawa M, Kondoh H. Sox2 gene regulation via the D1 enhancer in embryonic neural tube and neural crest by the combined action of SOX2 and ZIC2. Genes Cells . 2020 Apr;25(4):242-256. doi: 10.1111/gtc.12753. Epub 2020 Feb 26.
Copyright	2020 Molecular Biology Society of Japan and John Wiley & Sons Australia, Ltd.