GEISHA - A Chicken Embryo Gene Expression Database
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MATN1
matrilin 1, cartilage matrix protein

Gene
Official SymbolMATN1
Official Full Namematrilin 1, cartilage matrix protein
CGNC ID49841
also known asCMP, cartilage matrix protein|matrilin-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001030375
PolypeptideNP_001025546
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4146ENSG00000162510MIM:115437
Mouse17180ENSMUSG00000040533All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:106591
Xenopus595001, 379491957558
Zebrafish403023ENSDARG00000030215ZDB-GENE-050307-3ZFIN:ZDB-GENE-050307-3
Gene Ontology
Molecular Function
Biological Process
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene396505
Ensembl Gene
KEGGgga:396505
GEISHA IdMATN1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTCCTTCCTTTGTATGGAGGGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAGCAGCAGTTTCCTGGGTTCTCcDNA Template Length761
Forward cDNA Template Probeshow
GTAGGACTGAAATGTGGGTGTGGAAGGCAGAGAGCTGAGGAGCACATCTGGGCTGGTGCTGACAGTGCTGCGTTGCGCT
GCAGAGCCACGGCTGCAGGCTCATTGCACATCATCTCAGGAACAGGTCTAGCTCAGACAGGAGCTACTTCACTCATACA
TCATAGAACAGCTGCTAGCTAGGAAGGCTGAGCTTTTTGTCTTCCTGTATTTTACAGTAGCTATGGATAAACCCAACAA
GCAGCGGCATCCTAACCTATCTTATCTGCGATGCAGGTCATTACTATATTTCACCTACTAACTGACAAATGGTTCATGT
CTACAATAATAAGCCCATCAGCTGCTCTGGTTGACTTTTTACACAGCATCTGAATTGATTTTAAGTCACTTTGACTTTT
AAATTAAATTACCTCATGTGTACAAAAAAAAAAAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
 
7-12
stage 8
stage 11
Unlabeled
 
13-18
stage 13
stage 14
Ectoderm
Forebrain
Head Mesenchyme
Heart
Hindbrain
Midbrain
Neural Plate/Tube
Somatic Mesoderm
 
19-24
stage 21
stage 21
stage 21
Unlabeled
 
25-26
stage 26
stage 26
stage 26
stage 26
Cranial PNS
Leg Mesenchyme
Notochord
Sclerotome
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

EmageMGI:106591
MGI GXDMGI:106591

Frog

Xenbase957558

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050307-3
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