GEISHA - A Chicken Embryo Gene Expression Database
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CNR1
cannabinoid receptor 1

Gene
Official SymbolCNR1
Official Full Namecannabinoid receptor 1
CGNC ID53418
also known ascannabinoid receptor 1|CB1 cannabinoid receptor|cannabinoid receptor 1 (brain)
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001038652
PolypeptideNP_001033741
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.42802
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1268ENSG00000118432MIM:114610
Mouse12801ENSMUSG00000044288All phenotypic alleles (8):Targeted, knock-out(5) Targeted, other(3) MGI:104615
Xenopus100497761, 373759962200
Zebrafish404209ENSDARG00000009020ZDB-GENE-040312-3ZFIN:ZDB-GENE-040312-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428633
Ensembl Gene
KEGGgga:428633

Entry 1

GEISHA IdCB1.Stincic.2008Data SourcePublication
Complete cDNA Template Probeshow
TACCACTTCATCGGCAGCCTAGCTGTGGCCGACCTCCTGGGCAGTGTGATTTTTGCCTACAGTTTTGTGGATTTCCATG
TTTTCCACCGGAAGGATAGCCCCAATGTCTTCTTGTTCAAACTGGGTGGAGTTACAGCCTCCTTCACCGCCTCTGTAGG
TAGCCTTTTCCTCACGGCAATAGACCGGTACATCTCTATACACAGGCCGCTAGCTTATAAAAGGATTGTTACCCGACCA
AAGGCTGTCGTAGCATTTTGTGTGATGTGGACCATCGCTATCGTAATAGCCGTTCTTCCTCTGCTCGGCTGGAACTGCA
AAAAGCTCAACTCTGTTTGTTCGGACATATTCCCTCTCATCGATGAGACGTACCTGATGTTCTGGATTGGGGTCACCAG
CATCCTCTTGTTGTTCATTGTCTATGCCTACATGTACATTCTGTGGAAGGCTCACAGCCACGCCGTTCGCATGTTGCAG
CGAGGCACGCAGAAAAGCATAATCATTCAGTCGACGGAGGATGGTAAGGTACAGATCACTAGACCCGATCAAACTCGTA
TGGACATCAGGTTAGCCAAAACCTTGGTCCTTATCCTAGTTGTTCTAATCATATGCTGGGGCCCTCTCCTTGCCATCAT
GGTGTACGATGTCTTTGGGAAAATGAACAAGCTCATCAAGACTATCTTTGCCTTTTGCAGTATGCTGTGC
CitationStincic TL, Hyson RL. Localization of CB1 cannabinoid receptor mRNA in the brain of the chick (Gallus domesticus). Brain Res. 2008 Dec 15;1245:61-73. Epub 2008 Sep 20.
CommentsThe sequence below was obtained from NCBI (acc # AF480088) using the information provided in the publication.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
stage 44
Forebrain
Hindbrain
Isthmus/MHB
Midbrain
cerebellum
post hatch 10 days

Entry 2

GEISHA IdCNR1.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
AGGATTTCCTCAGATGTCTTGTTCCATCCTCCAAGTCTCTTTGAAACCAACAAGACTGAGGTTATGAAGTCAATCCTAG
ATGGCCTTGCAGATACAACTTTCCGAACAATTACGACAGATCTCCTTTACGTGGGCTCCAACGATATCCAGTACGAAGA
CATGAAAGGCGACATGGCATCCAAGCTGGGATACTACCCCCAGAAGTTCCCTCTCTCCTCCTTTAGGGGTGATCCTTTC
CAAGAAAAAATGACTGCAGGAGATGATCCCCTGCTAAGCATTATTCCCTCAGACCAGATCAATATCACAGAGTTTTACA
ACAAATCCTTGTCCACGTTTAAGGAAAATGAGGAGAACATACAGTGTGGGGAGAACTTCATGGATATGGAGTGCTTTAT
GATCCTAAATCCCAGCCAGCAGCTGGCCATCGCTGTGCTGTCGCTCACCCTGGGCACCTTCACAGTCCTAGAGAACCTC
CTGGTCCTGTGTGTTATCCTCCACTCCCGAAGCCTGCGATGTAGACCCTCTTATCATTTCATAGGCAGCCTGGCTGTGG
CCGACCTCCTGGGCAGCGTGATTTTTGTCTACAGTTTTGTTGATTTCCATGTTTTCCACCGGAAGGACAGCCCCAACGT
CTTCTTGTTCAAGCTGGGTGGAGTTACAGCCTCCTTCACCGCCTCCGTAGGTAGCCTTTTTCTCACGGCAATAGACCGG
TACATATCTATACACAGGCCACTAGCTTACAAAAGGATTGTAACCCGACCAAAGGCTGTCGTTGCGTTTTGTGTGATGT
GGACCATCGCCATTGTAATAGCTGTTCTTCCGCTGCTCGGCTGGAACTGCAAAAAGCTCAACTCTGTGTGTTCAGACAT
ATTCCCTCTCATCGATGAGACGTACCTGATGTTCTGGATTGGGGTCACCAGCGTCCTCTTGCTGTTCATTGTCTATGCC
TATATGTACATACTGTGGAAGGCGCACAGCCACGCTGTTCGCATGCTTCAGCGCGGCACGCAGAAAAGCATAATCATTC
AGAGTACGGAGGATGGTAAAGTACAGATCACTAGACCTGATCAAACTCGTATGGACATCAGGTTAGCCAAAACCTTGGT
CCTTATTCTAGTCGTTTTAATCATATGCTGGGGCCCTCTCCTCGCCATAATGGTGTACGATGTCTTTGGGAAAATGAAC
AAGCTCATCAAGACTGTCTTTGCCTTCTGTAGCATGCTCTGTCTGCTGAATTCGACAGTGAATCCCATCATCTACGCTC
TGAGGAGCAAGGACTTGCGACATGCCTTCCGGAGCATGTTCCCCACCTGCGAAGGGACTGCACAGCCTCTGGATAACAG
CATGGAGTCTGACTGCCAGCACAAACACGCCAACAACGCGGGAAACGTGCACAGGGCTGCTGAGAGCTGCATTAAGAGC
ACAGTTAAGATTGCCAAAGTGACCATGTCTGTCTCCACAGACACGACTGCTGAAGCATTGTAAGTCAGAGACTTCTCAG
CGTTGTGAGAAAAGGAGTTGGTTAAAAAAAAAAAAATAATAATTCAACAACAGAGAATACCAAACCCGTGGCTTAACGT
GTTTGTACCTCCCTGTAATATCTTTTTGGTTTGTCATTGTAGGCTAAGCAATGGTTGTGTTAAGAGCATTACCATCCGC
CAGTTCTTTGAGTTTTACAATTAGGGATCCAAGCTAAATTTTCAAAAGTTGTTTGGTTGTTTCTTTTTCCCCCTCAAAA
AGTGTTTACTGGATAATAGCAAGTTTCCTGCAAGAACACAGGAAAAACACCAAGCTAGCAAAAGTTCCTTTTAGGGGTG
CGAAGAAAAATTGTGAAACCTAATTGAAAACGAATGCATCCTAAATCAGTACCATTCAATAAGAAAAAGCCTTGTCATC
ATGCTGTCCATCTCAATGTGAAATGTATTTCATGTCTGTAAGTAATAGGAGTTTTTGATTTTTTCCAAAAGCGGCAGTG
CTGAGTTTTAGAAGTTTTGTAAAATGTGTTGTGTCCTGTGAATTGTATGCTGTTTTATTATGTGTTATTGATATTTGTC
CGATTAAACAAAGTGATAAGGTAGATTTATGTGGAAATAATGTGAAATGTGATATGTAAACCCCATTGAAAACACTTAC
TGTATTTGAAGAGTTCCTATGAGCTATTTTGGAAATTTTACACTTCTAGTGGTCTTCTGTGGACTTAGGGGAAAGGCTT
CATGTTCTTTTACTAAAATTACTTCCCTACTACCTTTTATTTTCACATGCATATGAGAATAACAGCAACAAAGGAATAG
AGGAGGAATATAAGAAAGGAATGCACTGGTTCAGACTTTTAAATACCGCTGCGTTTATACAGAAGGACATTTACTGTTG
TACAGACTTATCTCCCTTCTCTTGGGTGTTGTGTGACTATGAACACTGAAAGCAGAGGTCCCGGATTTTGGCTCCTTGT
GTCACATGTTGGTGCTGGACCACTGAAGACAGCATGTGTCTGGTTCCGCGTGCGATGTAATCACTGTGCCGTCGATGTA
TACTTGAAGTGTGTCGCATTCCTGTATCCCAGGTTTAAGCCAATTCAGAGCCTGAGATGCCGGACTTCAGCCTTCACTC
AGAGAGGGGGGAAGTATTGTCAGATTTAGGCATTTTCTTATTGTGTGAGCGTGTATATAAATAAATATCTATGTGTGTG
TACGCGTGTGTGCGTGTGTGTATGTAAGTATAATAAGTGTGAGTCACGGTAGCATAACTAAGATAGGACACTATGACCA
AATGTAAGCTGTATTTCTTGTTGCACGCTTTGCACACAAATTCTGTTTCTAAAATTGAGTTCTTCCAACTGATTACTGG
CGAAGGTACCGTATTACGAACATACAGATCCAACACTGAGGGGTGTATCCATGTGCTAGAGGAAACAACCTTCCAGCTG
TGCTTGAGAATGAAATGCAGCGAGGCAGAGATGGGTGTGAGCCAGCACTGACCACTGGAGTGGCTGCTGAGGGCGTTCT
GGAAATGGAGGACGCCAGAAATAAAGGAGCGTTTCAATCCATACGTATTCTGATCTGATTGTGTGAAACGAGGTGAGTC
TTGCTGTGAAACCAGGATACAGAGGACAAGGTGTGATTTCATCAGCTTCGAGGAAGGTGAAGTTACTCATAAAAGTGGA
GACTCTGCTCTGTAGTGGGATTGTGTTTGACACCTGGAATTTCCACAAGGAGAATGTTGCTAGTCTTTAAGGCATGGAT
ATTGTCTAACACTGAAGGTACTGTGTCCTGTTCTCTGCTGCCTTCCTTTTTTGGGCTGTTTCCTTATGCCCCTCCTGGC
TGCTTTCTGCCAAAATGGCTGTGAGTGTGGCCTAGCCCGCTAGCTGCCTGGTGTACGCCACAGGTGGACTGACTCCCTC
AGTGACACTGGGCCAGCAGAGCTGCTGTCCTGCAGAGGGCTTACATAGGGAAGGAGGGCAGGGTGGTAGCTTTGAGGTT
GCTGGCCACCAGGATGTCTCCATGGTGTTTGGAAGTTGTAGTGCAGGCCAGAGCAGCTGGTAGCACAAAAGGCCAAGCT
GAGCTTAGCTGGCAGCTCTTCGGTGGCAGAGGTGGTTGTGAGTTCAGGGCGCTCAGATGCTGTGTGTGATGGCACCTGG
CAGAGATCTCCTCAGGAGAGGTACTGGGCAGCAAAAGTTATGGGGGTATTCTCTTCCACCTCCCTCCCTGCAGCTAACC
TGAGTGGTGGGACACGACATCCCGCCCCTGAGTGGGCCAGCGCAGGTCTCTCTCGTATCTAGATGTAGTCCTTCCTAGA
GCAATCCTCTTGGAGAGGAGGGGGGAATCCCACTTAAATGTAAAGGTATTTTAAGAGCCATTTTTGAAACTGTCTTCTT
GTGAATTAAATGCAAACTTTGTGGACTTTCGTTGTGTATTTGAGTTCTAAATTTTATGTGATAAATCATGGGACAATGG
GGCTGTCTTGGCACTTAACTTGGTGCTTACTGATAGAATAAGAAATAGCATCCTGTGAAACGTTACCGTCTATCATCAG
GATCTTCATTTGCATAATGAGTTTTTCTAAAGCTCTGGGAGCTGTGTCGGTTCACTTAGAACCATTTATTCAAGAGGTG
GCAACCATTTGCCTACAAGTTGCACATGGAGTGGGACGGCCAATTCATTAGCAAAACCTGCTGCCGTTCCGAGATAAGC
TGTACTTCACCTTCAGCTCTAGCAGTTCCCCATTTGCAGCTGACTACCTTCACCTAGCGATAGCACAGCCAACCTGTGC
TCCACGGCCACCCACACTGTCACCACCCAACCAGCGATAGTCACCATTATGTGTACCTGAAAACTCCAAATGTCGTATA
GCTGTAAGAAGATCATTTGTGTTACATGCGTGCAGAGTTAGATTCTCAACAGTCTTGATTGTATATTTGTATAATATAA
TCTCCGCGACGCTGTGCAATCGATATCCGCGTTTTCTTGCACTGGTCTCTGGATGAAAATTGTAGTGTGTCTGTTGCGA
GATAGACAGCGCATTTTGCCTGCTGTTACTGGGCTGAATGTATGTAAATAAGTGGGAAAAACAAACGTCATCTGTACAA
GCAGTGGCCTAAAAGTCTGTAATTGTAGAGTAGGGCAATTGTTGAAGTTGCTGTGACATCTCAAATACTACCTTTGAAT
AAACTGTTTACAAGGTCTCTTGAGATGCTGTCTCATAGTGAAAGGAAAATACTTCCCTGTGATAATATAAGGTAAAGAG
ATGGGGCTACCCGAGCTTTTTATTTCCAGTGTTTGAAAGTGGAGAACATAACTCTTTATTGTCTGTAAATCTTACATTA
TTACTTCCTCTTAGAAGAATATTGTATCATTAGATGTTTGTTTGAGCTGGTAACATCCTTGCAACTGCTGCAATATTTT
TCATTAGCAACCTGTATAATAGTTTGTACACAAGTACTGTTCAGATTGTCATGAAAAGTAGCTTTGACCATTTACCTAC
CAGTAGCAGAATAGTATTTCTGTAAGATTTCCAGTGTACTACTACCATATCATATTTTATTTCTATAATGTAATTAAAC
TGTTATTTATTCAAGGAAAAAAAGAAGCATTCCTCTACTTTTTTTTTGTTTTCCAAATTTTGAGGTAATGAGGAAGCCA
CGTGATGATGCTGCCTCATCCCACAATCTGGTGCTCTACGTTTTGTTTATAAATTTGTCTGTCAGATTCTGAAACAACT
GCTTAAACAACTTGACGACAGGTTGTCAAGCTCTGTGGGGTTTAATTGTACGCTGATATCTTTGAAGGAGGAGGTAGAT
TATGTATTTGTGTATTCAGTACTATGGAGACGAGAGAAATGACATAGTTAAAACTGAATCTCCTGCTCCATTATGTAGG
CAATTTCCCCTTTCCTCTGTATTAGCAAAAAATGCAATAAATCTCTTTTGCCTTCGTCA
CommentsImages provided by Claire Anderson. As insufficient information was provided to verify sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number: NM_001038652.1 ). Related paper: Begbie J, Doherty P, Graham A. Cannabinoid receptor, CB1, expression follows neuronal differentiation in the early chick embryo. J Anat. 2004 Sep;205(3):213-8.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Epiblast
Primitive Streak
HH3b
4-6
stage 4
stage 4
Early Mesoderm
Epiblast
Primitive Streak
stage 4+
7-12
stage 7
stage 8
stage 8
stage 8
stage 11
stage 12
Cranial PNS
Extraembryonic Mesoderm
Forebrain
Headfold
Lateral Plate Mesoderm
Neural Crest
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
stage 12+
stage 8+
stage 8-
13-14
stage 13
stage 14
Cranial PNS
Forebrain
Head Mesenchyme
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharyngeal Arches and Clefts
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.42802

Mouse

Emage
EurexpressMGI:104615
MGI GXDMGI:104615

Frog

Xenbase962200

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040312-3
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