GEISHA - A Chicken Embryo Gene Expression Database
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RAPH1
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1

Gene
Official SymbolRAPH1
Official Full NameRas association (RalGDS/AF-6) and pleckstrin homology domains 1
CGNC ID6585
also known asLPD, ras-associated and pleckstrin homology domains-containing protein 1|LOW QUALITY PROTEIN: ras-associated and pleckstrin homology domains-containing protein 1|lamellipodin
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_421961
PolypeptideXP_421961
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.10081
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly33003FBgn0261811
Human65059ENSG00000173166MIM:609035
Mouse77300ENSMUSG00000026014All phenotypic alleles (2):Targeted, other(2) MGI:1924550
Xenopus100491727, 7791895933837
Zebrafish557435ENSDARG00000006301ZDB-GENE-070912-156ZFIN:ZDB-GENE-070912-156
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424107
Ensembl GeneENSGALG00000008674
KEGGgga:424107
GEISHA IdRAPH1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTCAGCAGCATTGGGTCTCATTC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTCCAGCAGCACCTCTTTATTCCcDNA Template Length871
Forward cDNA Template Probeshow
AGTTCTGGAGGGATTCTTAAAAAGCGCATATTTCTCTATACGTTCCACAAACATTAGCTTGTTTTGACTGTCTCTTGTC
CAATTGAGAAGATTTTCAACTAAATTTTCATGATCTTCAAAGATCCTTTCCATCTGCAATTCAGAGATGGTTTCCACCA
ATGACCAGTCTAAACTATAACCACAATGTGATTTGTCCATCAGATTGTCTAATACTTGTCTCACCGTCTGCCTCTCATC
CACCATCATTGTTTTTGAGCTGTCATCAGACATGTGGACTCTGATCACCAACTTTTTCACTTGTGCCTCTTTAATCTTC
TCTAACGCCACTCTAATCTTCTCAGCTTTCAGTTTAGCAGCCTGTTCCTCCTCGGTGATTGGTTGCCCTTGTGATGTCN
AGTCNAGTTCCTGAGGNCTNGNCGCCTTATCNATATCCAAAGAGTNCATGCTGGAAGCTGCANAAGTTANGCTGGAACG
GGAGGAGTTACNGATTGAGCGTACCTCAGCATCACTCACTGTGCCAGCAGATGCTGTCCNCCTGTGCTGGGCATTAACT
ACNGGTTTGGCATCTTCTGCTATAGACTGCTGGGCTGCCTCATCCANGCTCAAGGAAGCTTTCTCTAATTGTGCAGTGA
TGTCNTCCANAGAAACGTTGGCATGTGGTGGTTTAGTAACCTTACCAGATGAAGAGGATAATCCTTTCATACTGCCATG
CTTAGTAGAAGGACGGCTAGCAGGTGGTTTCTGAACTTTCGATTCTGTGGCAAGGCGTTTCACTGCAGTANTATTTGCA
GAATGAGACC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Notochord
Primitive Streak
 
7-12
stage 8
stage 10
stage 11
stage 11
Anterior Intestinal Portal
Area Opaca
Blood Islands
Forebrain
Foregut
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Sinus Venosus
Somites
 
13-18
stage 14
stage 18
stage 18
stage 18
Aorta
Dermatome
Eye
Foregut
Head Mesenchyme
Intermediate Mesoderm
Leg Mesenchyme
Liver
Mesonephros
Midbrain
Myotome
Nasal Placode/Nerve
Nephric Ducts
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Proepicardium
Sclerotome
Sinus Venosus
Somatic Mesoderm
Somites
Splanchnic Mesoderm
Wing Mesenchyme
 
19-24
stage 20
stage 20
stage 20
Foregut
Liver
Lung
Myotome
Nasal Placode/Nerve
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Allantois
Cranial Ganglia
Cranial Nerve
Foregut
Head Mesenchyme
Hindgut
Leg Mesenchyme
Liver
Mesonephros
Nasal Placode/Nerve
Notochord
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.10081

Mouse

EmageMGI:1924550
EurexpressMGI:1924550
MGI GXDMGI:1924550

Frog

Xenbase5933837

Fruit Fly

BDGPFBgn0261811

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070912-156
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