GEISHA - A Chicken Embryo Gene Expression Database
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CDHR1
cadherin related family member 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolCDHR1
Official Full Namecadherin related family member 1
CGNC ID1650
also known asPCDH21, prCAD, cadherin-related family member 1|photoreceptor cadherin|protocadherin-21
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001001759
PolypeptideNP_001001759
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human92211ENSG00000148600MIM:613660MIM:609502
Mouse170677ENSMUSG00000021803All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:2157782
Xenopus100496998, 100337587478981
Zebrafish449008ENSDARG00000004643ZDB-GENE-040924-4, ZDB-GENE-110210-1ZFIN:ZDB-GENE-040924-4, ZFIN:ZDB-GENE-110210-1
Gene Ontology
Molecular Functioncalcium ion binding
Biological Processhomophilic cell adhesion
Cellular Componentintegral component of membrane, plasma membrane
Links to other databases
Entrez Gene414847
Ensembl Gene
KEGGgga:414847
GEISHA IdCDHR1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAACTCTCCAGGGGGCTCAAATG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTTGTGGGTGCTGCTATGACCTCcDNA Template Length1070
Forward cDNA Template Probeshow
AGCTGCTTGTTGATGACTTGGGAGTGAGGGAGCCAGACACAGTTGGTACCCGCCACGCTGNGGTGTTCCCGCTNGCAGC
CAGGGCAGGGGGCGGTGGGGGCAAGGGAGCAGCTGGGGGCACTGGGGCTGCCTGGACATTGTTGTTGCTGTTCTCGTTC
TGCAGGCTCTTGGCATCGTCCTCGACGACAAACTTCTCTGCGGCATTACTGGGCCTCTTGAACTTCAGCCACTCCATCC
TCACCGTGCGGGACTGCTGGGTCTGTCTCTTTTTTATGATCCTTCTTACCGGCATGATTTTGTTGGACCGCTTATTGCG
CCANAACATGGCGGTAGAGATCATGATAGTTATCAGCACCATTATGCCCATGACACCAGCTAGCACTCCTAAGGCTTTC
ATGGGGTTATCTTTAGTTTGCATCAAAAAGGCGGCCATAGGCCCTTTGTGAANAGTCTCTTCTGTGATATCAATCTTCA
NAACTGCTGTGGTACTGAAGGACGGGGAGCCTCGGTCTTTGGCCTGCACCACCAACGACCATATGCAGTCTTTGTTCTT
TGTAATGTTGTGGATGATGTCCAGGGAACGGATATAGGACTTCAGCTTGATTTCCCCTGTGCTTTGGTCTATATCAAAC
ACATTGGCTGGATCTGCTTGCATGATGGAATAATCCACAATGTTGTTTGGTTCTTCTGCATCTTGATCTATAGCCTCTA
TCTTCACTGGTGACCCAATGATCATTGTCTTTTCCTGGATGTTTTCATTGAATTCTGGAGAGTGGTCATTGACATCTAG
CACAGTGATAAACACTTTCANCCAAGCTGTATTTCCCATCTGTATCCTCCGCTTTCACGTAAAAATTATACTTTGAGTT
CACTTCACCATCTAANANAGCCCAGGGCTGGGGTGTAAATTATACCTGTCGATGGGTGGNATTAGGAAACAAATCTGCT
TCCCGTTCCCATAAAAAAAATAATTTGAACTTCTNCCCCAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 11
stage 11
stage 11
Forebrain
Heart
Hindbrain
Midbrain
Neural Plate/Tube
Sinus Venosus
Unlabeled
 
13-18
stage 15
Unlabeled
 
19-24
stage 22
Unlabeled
 
25-26
stage 26
  

Mouse

EmageMGI:2157782
MGI GXDMGI:2157782

Frog

Xenbase478981

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040924-4, ZDB-GENE-110210-1
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