GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

CDHR1
cadherin related family member 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolCDHR1
Official Full Namecadherin related family member 1
CGNC ID1650
also known asPCDH21, prCAD, cadherin-related family member 1|photoreceptor cadherin|protocadherin-21
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001001759
PolypeptideNP_001001759
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.97
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human92211ENSG00000148600MIM:613660MIM:609502
Mouse170677ENSMUSG00000021803All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:2157782
Xenopus100496998, 100337587478981
Zebrafish449008ENSDARG00000004643ZDB-GENE-040924-4, ZDB-GENE-110210-1ZFIN:ZDB-GENE-040924-4, ZFIN:ZDB-GENE-110210-1
Gene Ontology
Molecular Functioncalcium ion binding
Biological Processhomophilic cell adhesion
Cellular Componentintegral component of membrane, plasma membrane
Links to other databases
Entrez Gene414847
Ensembl Gene
KEGGgga:414847
GEISHA IdCDHR1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAACTCTCCAGGGGGCTCAAATG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTTGTGGGTGCTGCTATGACCTCcDNA Template Length1070
Forward cDNA Template Probeshow
AGCTGCTTGTTGATGACTTGGGAGTGAGGGAGCCAGACACAGTTGGTACCCGCCACGCTGNGGTGTTCCCGCTNGCAGC
CAGGGCAGGGGGCGGTGGGGGCAAGGGAGCAGCTGGGGGCACTGGGGCTGCCTGGACATTGTTGTTGCTGTTCTCGTTC
TGCAGGCTCTTGGCATCGTCCTCGACGACAAACTTCTCTGCGGCATTACTGGGCCTCTTGAACTTCAGCCACTCCATCC
TCACCGTGCGGGACTGCTGGGTCTGTCTCTTTTTTATGATCCTTCTTACCGGCATGATTTTGTTGGACCGCTTATTGCG
CCANAACATGGCGGTAGAGATCATGATAGTTATCAGCACCATTATGCCCATGACACCAGCTAGCACTCCTAAGGCTTTC
ATGGGGTTATCTTTAGTTTGCATCAAAAAGGCGGCCATAGGCCCTTTGTGAANAGTCTCTTCTGTGATATCAATCTTCA
NAACTGCTGTGGTACTGAAGGACGGGGAGCCTCGGTCTTTGGCCTGCACCACCAACGACCATATGCAGTCTTTGTTCTT
TGTAATGTTGTGGATGATGTCCAGGGAACGGATATAGGACTTCAGCTTGATTTCCCCTGTGCTTTGGTCTATATCAAAC
ACATTGGCTGGATCTGCTTGCATGATGGAATAATCCACAATGTTGTTTGGTTCTTCTGCATCTTGATCTATAGCCTCTA
TCTTCACTGGTGACCCAATGATCATTGTCTTTTCCTGGATGTTTTCATTGAATTCTGGAGAGTGGTCATTGACATCTAG
CACAGTGATAAACACTTTCANCCAAGCTGTATTTCCCATCTGTATCCTCCGCTTTCACGTAAAAATTATACTTTGAGTT
CACTTCACCATCTAANANAGCCCAGGGCTGGGGTGTAAATTATACCTGTCGATGGGTGGNATTAGGAAACAAATCTGCT
TCCCGTTCCCATAAAAAAAATAATTTGAACTTCTNCCCCAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 11
stage 11
stage 11
Forebrain
Heart
Hindbrain
Midbrain
Neural Plate/Tube
Sinus Venosus
Unlabeled
 
13-18
stage 15
Unlabeled
 
19-24
stage 22
Unlabeled
 
25-26
stage 26
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.97

Mouse

EmageMGI:2157782
EurexpressMGI:2157782
MGI GXDMGI:2157782

Frog

Xenbase478981

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040924-4, ZDB-GENE-110210-1
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona