GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

CG-1B
galectin 1

Gene
Official SymbolCG-1B
Official Full Namegalectin 1
CGNC ID
also known asLGALS1, beta-galactoside-binding lectin|14 kDa lectin|14K beta-galactoside-binding lectin|C-14|galectin CG-1B|gbl|lectin, galactoside-binding, soluble, 1 (galectin 1)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205495
PolypeptideNP_990826
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.854
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human3956ENSG00000100097MIM:150570
Mouse16852ENSMUSG00000068220All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:96777
Xenopus100485378, 379433971977
Zebrafish
Gene Ontology
Molecular Functioncarbohydrate binding, galactoside binding, signal transducer activity
Biological Processmyoblast differentiation, plasma cell differentiation, more...positive regulation of I-kappaB kinase/NF-kappaB signaling, T cell costimulation
Cellular Componentextracellular matrix, extracellular space, intracellular
Links to other databases
Entrez Gene396491
Ensembl GeneENSGALG00000012420
KEGGgga:396491

Entry 1

GEISHA IdLGALS1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGGGATAATCGCACCGAATGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCAAAGACAGAAAGACCAAGCCGcDNA Template Length289
Forward cDNA Template Probeshow
GGGAAGAGATTGGTGGCCTGGCAGGTGGACAGTCAGATCGCTTGGGTTGATGCTGAAAGTGATCTCTATTGGGGCTCCC
TTCTGGAAAGGGAAGACCGTCTCCCTTTGCTCGGTACCCCACTCTTCCATTTTCTTTGAGTTGCACACAATGAGGTTCA
CATCACCGTGAGCATCAAAGCGGGGGTTGAAGTGAAGCCCCAGGTGGGTTGAGTCCTTGCCCAGATTCATCACAAAGCT
TTTGGCATTCGGTGCNATTATCCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 9
stage 11
Midbrain
Unlabeled
No staining stages 7-9
13-18
stage 17
Mesencephalon
 
19-24
stage 21
stage 22
Unlabeled
 
25-26
stage 26
Unlabeled
 

Entry 2

GEISHA IdLGLAS1.Bandyopadhyay.2008Data SourcePublication
Complete cDNA Template Probeshow
AGCATCAGCCTGCACAGCAGCATCATGTCTTGTCAGGGACCAGTGTGCACCAACTTGGGTCTCAAGCCTGGCCAGCGCC
TCACTGTCAAGGGGATAATCGCACCGAATGCCAAAAGCTTTGTGATGAATCTGGGCAAGGACTCAACCCACCTGGGGCT
TCACTTCAACCCCCGCTTTGATGCTCACGGTGATGTGAACCTCATTGTGTGCAACTCAAAGAAAATGGAAGAGTGGGGT
ACCGAGCAAAGGGAGACGGTCTTCCCTTTCCAGAAGGGAGCCCCAATAGAGATCACTTTCAGCATCAACCCAAGCGATC
TGACTGTCCACCTGCCAGGCCACCAATTCTCATTCCCCAACCGGCTTGGTCTTTCTGTCTTTGACTACTTTGATACGCA
TGGAGACTTCACGCTCCGGTCTGTCAGCTGGGAGTAACTCCTCACACCTGTCTCAAAATCTCAAAAAAAAAAAAAAAAG
CCATCAATAAATGTGTTTTCGTCT
CitationBandyopadhyay A, Kubilus JK, Crochiere ML, Linsenmayer TF, Tabin CJ. Identification of unique molecular subdomains in the perichondrium and periosteum and their role in regulating gene expression in the underlying chondrocytes. Dev Biol. 2008 Sep 1;321(1):162-74. doi: 10.1016/j.ydbio.2008.06.012. Epub 2008 Jun 16.
CopyrightCopyright © 2013 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_205495.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 38
stage 38
Leg Bones
Leg Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.854

Mouse

Emage
EurexpressMGI:96777
MGI GXDMGI:96777

Frog

Xenbase971977

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona