GEISHA - A Chicken Embryo Gene Expression Database
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CAPN8
calpain 8

Gene
Official SymbolCAPN8
Official Full Namecalpain 8
CGNC ID7133
also known ascalpain-8
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_426117
PolypeptideXP_426117
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human388743ENSG00000203697
Mouse170725ENSMUSG00000038599All phenotypic alleles (10):Targeted, knock-out(3) Targeted, other(7) MGI:2181366
Xenopus733929, 398177, 379139920784
Zebrafish337730ENSDARG00000055715ZDB-GENE-050522-279ZFIN:ZDB-GENE-050522-279
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428561
Ensembl Gene
KEGGgga:428561
GEISHA IdCAPN8Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCAGTATGGAGAGTGGGTGGATGTG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTCAGTGTGTCAGGAGTCAGGTTGCcDNA Template Length613
Complete cDNA Template Probeshow
CAGTATGGAGAGTGGGTGGATGTGGTGGTAGACGACCGGCTGCCCACCAAGAACGGGGAGCTGCTCTTCGTGCATTCAG
AGGAAGGCAATGAGTTCTGGAGCGCACTGCTGGAGAAAGCCTACGCCAAGCTGAATGGTTCTTATGAAGCTCTAGCTGG
AGGGTCCACTATAGAGGGGTTTGAGGATTTTACTGGAGGCATCTCTGAATCCTATGACCTGCGGAGGGCTCCAGCAAAC
CTGTTCCAAATTGTCCAGAAGGCTCTGAGGGCTGGCTCACTGCTCGGCTGTTCCATTGATATAACTCGTGCATCTGAAA
CAGAAGCAATCACGAGTCTGAAGCTTGTGAAAGGACATGCTTATTCTGTCACTGGGGCAGAAGAGGTCTATTACCGAGG
ACGGCCAGAGAAACTTGTGAGGCTTAGAAATCCCTGGGGTGAAATAGAATGGACTGGAGCGTGGAGTGATAATGCTCCC
GAATGGAATTATATTGATCCCAAACAAAAGCAGGCTCTGGATAAGCAAGTAGATGATGGAGAATTTTGGATGGCGTTTT
CTGATTTTCAAAGGCAGTTCACCCGTCTGGAGATCTGCAACCTGACTCCTGACACACTGA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 6
Early Endoderm
Extraembryonic Mesoderm
extraembryonic endoderm
 
7-12
stage 7
stage 8
stage 10
stage 10
stage 10
stage 10
stage 11
Anterior Intestinal Portal
Area Opaca
Ectoderm
Endoderm
Forebrain
Foregut
Head Mesenchyme
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Oral Pharynx
Paraxial Mesoderm
Sinus Venosus
Somites
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 14
Neural Plate/Tube
extraembryonic endoderm
extraembryonic mesoderm
 
19-24
stage 20
stage 20
stage 24
Allantois
Amnion
Foregut
Leg Ectoderm
Leg Mesenchyme
Liver
Mesonephros
Myotome
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Widespread Expression
Wing Ectoderm
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
Allantois
Amnion
Ectoderm
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Leg AER
Leg Mesenchyme
Liver
Mesonephros
Midbrain
Myotome
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Ventricles
Widespread Expression
Wing Ectoderm
Wing Mesenchyme
 

Mouse

Emage
EurexpressMGI:2181366
MGI GXDMGI:2181366

Frog

Xenbase920784

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050522-279
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