Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

TCF7L1
transcription factor 7 like 1

Gene

Official Symbol	TCF7L1
Official Full Name	transcription factor 7 like 1
CGNC ID	49223
also known as	TCF3, transcription factor 7 like 1\|transcription factor 7-like 1\|HMG-box transcription factor Tcf-3\|transcription factor 7-like 1 (T-cell specific, HMG-box)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_003643906
Polypeptide	XP_003643954
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.140

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395230
Ensembl Gene
KEGG	gga:395230

Entry 1

GEISHA Id	Tcf-3.Schmidt.2004	Data Source	Publication
Complete cDNA Template Probe	show CCNTATTACCCGCTGTCGCCAGAACCCGTGGGTCAGATCCCGCACCCGCTGGGCTGGCTTGTGCCGCAGCAAGGACAGC CCATGTACTCCATCCCCCCCGGCGGCTTTCGGCATCCCTACCCTGCCCTCGCCATGAACGCCTCCATGTCCAGCCTGAT GTCCAGCCGCTTCTCCCCACACATGGTCCCACCGCCCACCCACGGGCTGCACCCCTCGGGCATCCCACACCCCACCATC GTCTCACCCATCGTGAAGCAGGAGTCGGCCCAGCCCAGCACCAGCCCTGGCGTCAGCTCGAAATCCCCCATCACAGTGA AGAAGGAGGAGGAGAAGAAGCCCCACATCAAGAAGCCGCTCAATGCCTTCATGTTGTACATGAAGGAGATGAGGGCCAA GGTGGTGGCTGAGTGCACGCTGAAGGAGAGCGCAGCCATCAACCAGATCCTGGGCCGGCGGTGGCACTCTCTGTCGCGG GAGGAGCAGGCCAAGTACTACGAGCTGGCACGGAAGGAGCGGCAGCTGCACTCACAGCTCTACCCCACGTGGTCGGCCC GCGACAACTACGGCAAGAAAAAGAAGAGGAAGCGAGAGAAGCTGGCCCAGCAGCAGAGCCACGAGGCAGAGAGCGTGCT GCCCTCCAGGAGCAAGAAGCCGTGCGCCCCGCACCACCTGCCTCCTGATAAACCCTGCGACAGCCCGGCCTCGTCCCAC GGCAGCATGCTGGATTCACCCGCCACGCCATCGGCCGCCCTGGCCTCCCCGGCTGCTCCTGCCGCCACGCACTCAGAGC AGACGCAGCCGCTCGCGCTGGTCACCAAACCGGCCGACTGAGGGGGGGTTGAATAGGAGCCCCCCCCCACCCGCTGTGC ACCACAGACGCCACAATCACGACTCCCAACGCAGCCAAACCATTATTGGTCAATATTTGACCTTTTCTGAACTGTTTTT CTTTTTTTTTTGGTGGATTTCTTTTTTTTTTTTTGCCTTTTGGGAAGCAGACTCCGGAGGAAGAGGCGCTTTCCCTTTA CCAGCAGTCGACCTAAAGACCGTTTTTATTAAAAAAAAAAGAAGAAAAAAAAAAAGTGGTTTTTTTTTTTTAAATTTTT ATTTTTAA
Citation	Schmidt, M, Patterson, M, Farrell, E, Munsterberg, A. Dynamic Expression of Lef/Tcf Family Members and B-Catenin During Chick Gastrulation, Neurulation, and Early Limb Development. Dev Dyn. 2004 Mar;229(3):703-7.
Copyright	Copyright © 2004 Wiley-Liss, Inc., A Wiley Company

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

1-3

stage 3

Epiblast

4-6

stage 4

Epiblast
Neural Plate/Tube

7-12

stage 7

stage 9

stage 11

stage 12

Ear/Otic Placcode
Forebrain
Hindbrain
Midbrain
Neural Plate/Tube
Primitive Streak
Somites
Spinal Cord

otic vessicles

13-18

stage 14

Forebrain
Hindbrain
Midbrain
Spinal Cord

19-21

stage 21

Leg Mesenchyme
Wing Mesenchyme

hindlimb, forelimb

Entry 2

GEISHA Id	TCF7L1.Trevers.2023	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show ATATGGGATGGAGCGATCCTGTAAGGGAAGGGGGGACCATAGATGGGACGTGGGGAACCCTTGAAGGGATGTGGGCGCC CAGATGCGATGGAGCAGCCCAGGTGAGATGTGGGAACCCAGACTGAATGGGGGGGACCCTGGATGGGACGCGGGGACTC AGACGAGACGGAGGGACCCGGATGGGGTGCGGTGCCTCGCATGGGTCGGGGACACCCTGGACGGGACGGAGAGATCCCG CAAGGGATGGGGGGACCACAGACCGGGCGTGGGGACCCAGGCGGAGCGGCCCCCGCAGCCCCGGGAAAGTTTCCAGAAG CCGCGGGACGCGCTCGCTGAAGTGGTCAGACGACAGCAGGATGGGGGTTTCTTTAAGGGCCCCCCCTACCCCGGCTACC CCTTCCTGATGCTCCCTGAGCTGGGCGCCCCGTACCTCTCCAATGGAGCTCTGTCCCCTGGAGGCGCCCGCACTTACCT GCAGATGAAGTGGCCGCTGCTGGATGTGCCAGCCGGGGCCACGCTGAAGGACAGCCGCTCACCATCACCTGCACACCTG TCCAACAAGGTCCCGGTGGTGCAGCACGCGCCCCACATGCACCCATTGACGCCGCTCATCACCTACAGCAATGACCACT TCTCGCCCGGCTCACCGCCTGCGCACCTCTCACCCGACATCGACCCCAAAACGGGGATCCCGCGCCCGCCGCACCCTCC CGAGCTGCCCCCCTACTACCCGCTGTCGCCAGGAGCCGTGGGTCAGATCCCGCACCCGCTGGGCTGGCTTGTGCCGCAG CAAGGACAGCCCATGTACTCCATCCCCCCCGGCGGCTTTCGGCATCCCTACCCTGCCCTCGCCATGAACGCCTCCATGT CCAGCCTGATGTCCAGCCGCTTCTCCCCACACATGGTCCCACCGCCCACCCACGGGCTGCACCCCTCGGGCATCCCACA CCCCACCATCGTCTCACCCATCGTGAAGCAGGAGTCGGCCCAGCCCAGCACCAGCCCTGGCGTCAGCTCGAAATCCCCC ATCACAGTGAAGAAGGAGGAGGAGAAGAAGCCCCACATCAAGAAGCCGCTCAATGCCTTCATGTTGTACATGAAGGAGA TGAGGGCCAAGGTGGTGGCTGAGTGCACGCTGAAGGAGAGCGCAGCCATCAACCAGATCCTGGGCCGGCGGTGGCACTC TCTGTCGCGGGAGGAGCAGGCCAAGTACTACGAGCTGGCACGGAAGGAGCGGCAGCTGCACTCACAGCTCTACCCCACG TGGTCGGCCCGCGACAACTACGGCAAGAAAAAGAAGAGGAAGCGAGAGAAGCTGGCCCAGCAGCAGAGCCACGAGGCAG AGAGCGTGCTGCCCTCCAGGAGCAAGAAGCCGTGCGCCCCGCACCACCTGCCTCCTGATAAACCCTGCGACAGCCCGGC CTCGTCCCACGGCAGCATGCTGGATTCACCCGCCACGCCATCGGCCGCCCTGGCCTCCCCGGCTGCGCCTGCCGCCACG CACTCAGAGCAGGCGCAGCCTCTGTCGCTCACCACCAAGCCGGAGGCCAGGGCTCAGCTCGCCTTCCTCTCCAGCAAAA CCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCTGGGCTCCCCCCCGTCGCTGCTCCCCAGGCCCATCGCCTT CCCCTCGCTGCTGCTCTCCTCTCCGCCCGCCCCGCAGCAGACGCAGCCGCTCGCGCTGGTCACCAAACCGGCCGACTGA GGGGGGGTTGAATAGGAGCCCCCCCACCCGCTGTGCACCACAGACGCCACAATCACGACTCCCAACGCAGCCAAACCAT TATTGGTCAATATTTGACCTTTTCTGAACTGTTTTTCTTTTTTTTTTGGTGGATTTCTTTTTTTTTTTTTGCCTTTTGG GAAGCAGACTCCGGAGGAAGAGGCGCTTTCCCTTTACCAGCAGTCGACCTAAAGACCGTTTTTATTAAAAAAAAAAGAA GAAAAAAAAAAAGTGGTTTTTTTTTTTTAAATTTTTATTTTTAAGAAAGAATAAAAGGAAAAAAAAAAAAGAAAAAAGA CCCTTCCTCAAGCTGGACATCCAGCACTGATGCCCCCCAGTGCCCCCAATGCCCCCGGTTCCATCCCGCTGCAGCTGGA CCCGGCCCCCAGCACGGAGCTGGGGTAGGGGGTGAGGGGTGGGGGTGATGGGGGTGGGGCGTTTCCCATTGAATCCCTG TTATTTTTCACACACACACACACAAAAAAAAAAACCAACCAAACAAAACCAAACCAAACAAACAAAGAAAAGGAAATAA AACTACAGCTGCAACTTTGCTGTGTGAGCGTTGTCCGTGCGGGAGGGCCCGGATTGGCGGAGCGCTGTTTTCCTCTGCA AATCACCGCCGGTGATGTCAGCCCAGCATCCTCTGTGCTGCAGCCCCAGAGACCCCACGGCTCCAAAAGACTCAAAAAC GCTGCTTTTTCTTGCTCAGAAAAGCCAAAAAAACCTCTGTCCTGCGAGGGAACGCGGCCGCGCTCCGCCGACACCGGGG GCAGGATGCGGCCGAGCAGCGCCCTGAATGGGATTTCATGGGAAATTAAAGGCATGAAGAGACCTGTCACAAGAATTAA AGTCTGGACCAGAGCCAGACGGCTTCAAACAGA
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_046903453 ).