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Human Disease Gene Search
CDH11 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol CDH11 Official Full Name cadherin 11 CGNC ID 50082 also known as cadherin-11, cadherin-11|cadherin 11, type 2, OB-cadherin (osteoblast), Cadherin-11 precursor gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id ChEST422m9 Data Source GEISHA ISH Analysis Forward cDNA Template Probe show GCGGCTCGAGGGGGCGGGGGGTGGCTGTGGTGCCGCTGGGTTGGCACAGGGCGTCTGCCACACAGGAGCCGAGCGGCTC
Entry 2 GEISHA Id CDH11.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer TCCAAAGTTCATCAGCAATGGG Reverse cDNA Template Primer ATTAACCCTCACTAAAGGCTCCTCCTCCTTCATCATCGTAAG cDNA Template Length 932 Forward cDNA Template Probe show ATGTTCTCGCGGAATCTTCTTCTTCAAAAACAATGAGAGGTTCTTTCTTCTGCCTTTTCAGTGTTACAAACAACACTAC
Entry 3 GEISHA Id Cad11.Jiankai.2007 Data Source Publication Complete cDNA Template Probe show AGATGCTGCCGCCTCTGCTCGGCGTCTAGTTGTGAATGGGACTTGCCTCCTCTCCCTCTCCGGAGGTGGTCCCGGGAAG
Citation Luo J, Wang H, Lin J, Redies C. Cadherin expression in the developing chicken cochlea. Dev Dyn. 2007 Aug;236(8):2331-7. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments According to the authors, ""For in situ hybridization... the RT-PCR fragments encoding chicken Cad8, Cad11, Cad19, and Cad20 were used as templates for the in vitro synthesis of cRNA probes." The accession number given in the paper is NM_001004371. The primers are:
5-gctctagagatgctgccgcctctgct-3
5-gctctagacctgcttacatttcttctggattc-3 and the sequence attached was excerpted from the full length seq. between these primers.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 31-44 stage 37
stage 40
stage 44
Ear/Otic Placcode
Entry 4 GEISHA Id CDH11.Lin.2010 Data Source Publication Complete cDNA Template Probe show CTTCCCTCTGGGCTGGGGGGAAGGGAGAAGGAAATAGAGAAGAAGCAACAGCCTCCAGCTTCTCCCTTCCTCTCATCTC
Citation Lin J, Luo J, Redies C. Molecular characterization and expression analysis of ADAM12 during chicken embryonic development. Dev Growth Differ. 2010 Dec;52(9):757-69. Copyright © 2010 The Authors. Journal compilation © 2010 Japanese Society of Developmental Biologists. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001004371).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-29 stage 29
stage 29
Aorta Lung Myotome Spinal Cord
Entry 5 GEISHA Id CDH11.Singh.2016 Data Source Publication Complete cDNA Template Probe show CACTGAAGATGCTGCCGCCTCTGCTCGGCGTCTAGTTGTGAATGGGACTTGCCTCCTCTCCCCCTCCTCCGGAGGTGGC
Citation Singh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31. Copyright Copyright © 2015 Elsevier B.V. All rights reserved. Comments The complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST712b21.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30 stage 28
Limb Buds 31-38 stage 31
stage 34
stage 36
stage 38
Limb Buds all
Entry 6 Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-30 stage 29
stage 30
stage 30
Limb Buds 31 stage 31
stage 31
Limb Buds all
Data from NCBI Unigene EST ProfileGga.4941
Mouse Frog Fruit Fly Zebra Finch Zebrafish
