Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

MEF2C
myocyte enhancer factor 2C

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	MEF2C
Official Full Name	myocyte enhancer factor 2C
CGNC ID	10854
also known as	myocyte-specific enhancer factor 2C\|MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_001231661
Polypeptide	XP_001231662
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.55291

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	4208	ENSG00000081189	MIM:613443	MIM:600662
Mouse	17260	ENSMUSG00000005583	All phenotypic alleles (5):Targeted, knock-out(3) Targeted, other(2)	MGI:99458
Xenopus	100127198, 444310			486957
Zebrafish	30575, 798771	ENSDARG00000029764, ENSDARG00000009418	ZDB-GENE-980526-253, ZDB-GENE-040901-7	ZFIN:ZDB-GENE-980526-253, ZFIN:ZDB-GENE-040901-7

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	769007
Ensembl Gene
KEGG	gga:769007

Entry 1

GEISHA Id	MEF2C.UAlinear	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GTGAGAGAGAGAGAAATAGAGACACGGAGAAGGAGAAGAAAAGGGAGGAAGAGGGAGAGAAGCAGACAAGGACACCTCG TCAGGCGTGTAGTTTGAATCCCTTCCTTGCCTCCCCCTTCCCCTCCGCGATGTTACAAAGGCTGTGAGCTGCTCGGCTT TTCCCATTCGCCTGCTGTCACTTCCTTCCTGGACGCTCTCAGGACGAGTCCGGTTACTTTTAATCCGACCAGCAGCTCA GCCACTTTCTCCTCCTCCACGCTGCACACACGCAGACACGCGCACACACACACACACACCAGACGTCTTCTGGCTGCTT ATTGGATTGACTTTGAAGGTTGTGTGTGTGATTCAAGGAGGCTGCATGTTGAACCGGGTGGTGAATATTTAAGGCTGGA AGAAGTAAAGGGATTTTTCTTTTTCCTGTGAAAGGAAAATATCTCAAGGACTAGTCTGATCATCCAAACAGCTAAATGT TTATAATCAGGAACGGATGCAGGGGACTGTGAACTGAATAGTGCAAGTGCTGAAGAAGGAGGCTTGTTTTGAGGAAACA GGAAAGAGGAAGAAAAGAGAAGGGAAAAATACATAATTTTAAGGAAGAAGGAGAGAAAAAAAAACGGGGACTATGGGGA GAAAAAAGATTCAGATTACAAGGATTATGGATGAGCGTAACAGACAGGTGACATTTACGAAGAGGAAATTTGGGTTAAT GAAGAAGGCTTATGAGCTGAGTGTTCTGTGTGACTGCGAGATTGCTCTAATAATCTTCAACAGCACCAACAAACTGTTC CAGTATGCCAGCACGGATATGGACAAAGTGTTGCTGAAGTATACTGAGTATAATGAGCCGCATGAGAGTCGAACGAATT CAGATATTGTTGAGACGTTGAGAAAGAAAGGACTTAATGGCTGTGACAGTCCAGACCCCGATGCAGACGATTCAGTAGG TCACAGCCCTGAGTCTGAGGACAAGTACAGGAAAATTAATGAAGATATTGATCTAATGATCAGCAGACAAAGATTGTGT GCTGTTCCACCACCAAACTTTGAGATGCCAGTTTCTATCCCAGTGTCCAACCACAGCAGTCTGGTATACAGTAATCCAG TCAGCTCACTGGGAAACCCTAATCTTTTGCCACTGGCCCATCCTTCTTTGCAAAGAAATAGCATGTCTCCTGGCGTGAC ACATCGGCCTCCAAGTGCAGGTAACACAGGTGGCCTGATGGGTGGGGACCTCACTACCGGTGCAGGCACCAGTGCAGGA AATGGTTATGGCAACCCCCGCAACTCACCAGGTCTGCTGGTCTCACCTGGCAACTTGAACAAGAATATGCAAGCAAAAT CTCCGCCTCCAATGAATTTGGGAATGAACAACCGTAAACCAGATCTCCGTGTGCTTATTCCACCTGGCAGCAAGAATAC AATGCCATCAGTGTCTGAGGATGTTGATCTGCTCCTGAATCAGAGGATAAATAACTCCCAGTCTGCTCAGTCATTGGCT ACTCCAGTGGTTTCCGTAGCAACTCCTACTCTACCAGGGCAAGGGATGGGAGGATACCCATCAGCCATCTCAACAACAT ATGGTACTGAATATTCTCTGAGTAGTGCAGATATATCATCTCTCTCTGGATTTAATACAGCCAGTGCTCTTCATCTTGG TTCTGTGACTGGCTGGCAACAGCAACACCTACATAATATGCCGCCGTCTGCCCTCAGTCAACTGGGGTAA
Comments	No expression detected at or before stage 6.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 6

Unlabeled

No expression detected at or before stage 6.

7-12

stage 7

stage 8

stage 9

stage 10

stage 12

Blood Islands
Blood Vessels
Ear/Otic Placode
Heart
Heart Tube
Lateral Plate Mesoderm
Neural Crest
Sinus Venosus
Somites

Dorsal view.
Low level expression.
Ventral view.

13-18

stage 16

stage 17

Head Mesenchyme
Heart Tube
Pharyngeal Arches and Clefts
Somites

19-24

stage 21

stage 23

Allantois
Ear/Otic Placode
Eye
Head Mesenchyme
Heart
Myotome
Somites

stage 25

Ear/Otic Placode
Eye
Head Mesenchyme
Heart
Myotome

Entry 2

GEISHA Id	MEF2C.Anderson.2022	Data Source	Direct Submission
Complete cDNA Template Probe	show `GCGGCTCGAGTTGGGAATGAACAACCGTAAACCAGATCTCCGTGTGCTTATTCCACCTGGCAGCAAGAATACAATGCCA TCAGTGTCTGAGGATGTTGATCTGCTCCTGAATCAGAGGATAAATAACTCCCAGTCTGCTCAGTCATTGGCTACTCCAG TGGTTTCCGTAGCAACTCCTACTCTACCAGGGCAAGGGATGGGAGGATACCCATCAGCCATCTCAACAACATATGGTAC TGAATATTCTCTGAGTAGTGCAGATATATCATCTCTCTCTGGATTTAATACAGCCAGTGCTCTTCATCTTGGTTCTGTG ACTGGCTGGCAACAGCAACACCTACATAATGCCGCCGTCTGCCCTCAGTCAACTGGGAGACCGTACCACCACCCCCTCG AGATACCCACAGCACACGCGCCATGAGGCGGGGAGATCTCCC`
Citation	Anderson C, Khan MAF, Wong F, Solovieva T, Oliveira NMM, Baldock RA, Tickle C, Burt DW, Stern CD. A strategy to discover new organizers identifies a putative heart organizer. Nat Commun. 2016 Aug 25;7:12656. doi: 10.1038/ncomms12656.
Copyright	Copyright © 2016, The Author(s)
Comments	Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST776g19. Related paper: Anderson C, Khan MAF, Wong F, Solovieva T, Oliveira NMM, Baldock RA, Tickle C, Burt DW, Stern CD. A strategy to discover new organizers identifies a putative heart organizer. Nat Commun. 2016 7:12656. doi: 10.1038/ncomms12656.