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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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SNX30
sorting nexin family member 30

Gene

Official Symbol	SNX30
Official Full Name	sorting nexin family member 30
CGNC ID	11678
also known as	sorting nexin-30, Sorting nexin family member 30
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_424910
Polypeptide	XP_424910
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.11940

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	401548	ENSG00000148158
Mouse	209131	ENSMUSG00000028385		MGI:2443882
Xenopus	549659, 734574			944716
Zebrafish	550496	ENSDARG00000069601	ZDB-GENE-050417-330	ZFIN:ZDB-GENE-050417-330

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	427330
Ensembl Gene	ENSGALG00000015660
KEGG	gga:427330

Entry 1

GEISHA Id	N17	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GAGATGACTTCCTGCCGGTGCTTAGGGAATATATACTGTATTCTGAGTCAATGAAGAATGTGTTGAAGAAGAGAGACCA AGTTCAAGCAGAGTATGAAGCAAAACTGGAAGCAGTAGCCTTGAAAAAAGAAGACCGTCCAAAGGTACCTACAGATGTT GAGAAATGTCAAGACCGAGTAGAATGTTTTAACGCTGATCTGAAAGCAGATATGGAGAGATGGCAGAACAATAAGCGAC AAGACTTTAGGCAGCTACTCATGGGAATGGCAGATAAAAACATCCAGTACTACGAGAAGTGCCTTACAGCATGGGAGTC AATTATACCACTATTGCAAGACAAGCCAGAGACCAAATAAGAAGTACCTTCATGGACAGTCTAGCACTTCTGTGCTCAG TACCACTAGACATACTGGAACTCTATGAAGGTCTCTTTTTTTTTTTTTTTGTCAACTGAGATGCCAGCTGTGCTCAGGC TGGAACAGACCCTCTGAAGACTATTTGACTTTTTTCCTCATTTTCTTTGTAAACTGGGGTATGTTTCATCTTTTTGAGG TATCTTGAATGGTTCCTTCTCTATCCTATGGAGTGACATGGGGCTTATAGT
Reverse cDNA Template Probe	show GGGGGCCCCCCCCCCTAAATGGGAAAAAATAAATTTTTTGAAAAAAAAAATTTTAATAAACCCCAAACTTTTTTTTTTA GAAACCCCCCAGGGGTTTTTTCCCAAAGGGGGCCCCTTTGGGGGGCCCCCAAAAAGGGGTCAAAAAGGGGGCCCCCCCC TCCTTGACCCCCCAAAAAAAAGGCCCTTTTCCCCCCCCCCTTGGGGGGCCCCCCCCCCTTTTTTTTTTCCCCCCCCCCC CAAAGGGTTTTTAAAAAAAAAAAAATTCCCCCCGGTGGGGGGGTCCCCCCCCAACCCCCCAAAAAGTTTTTTTTTTTTT TTCAGGGGGCCCCCCCCAAAAAAAAAACCCCCGAAAATTTTTTTTTTTTTCCCCAAAAAAAACCCCCCCTTTTTTTAAA AATTTTTTTTCGGGGGGGGCCCTTTCCAAAAAAAAATTTTTTAAAACCTCCCGGGGTTTTTTGGGGGCCCCCTTAAAAA AAAAGTGGGGGTTAACGTTCCCCCCCAAAAATTTTCCAAAAAAAAAACGTGGGTTTTTTTCAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Stage

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Comments (click to highlight)

7-12

stage 7

stage 8

stage 9

stage 10

stage 11

stage 12

Head Process
Heart
Notochord

13-18

stage 13

stage 14

stage 16

stage 17

Heart
Heart Tube
Hindbrain
Midbrain
Notochord

stage 19

Head Process
Heart
Hindbrain
Midbrain
Notochord

floor plate

Entry 2

GEISHA Id	SNX30.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TCTCAGTCTACCCAATGGCACAC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGGGACGGTCTTCTTTTTTCAAGGC	cDNA Template Length	936
Complete cDNA Template Probe	show ATGTCGGGCGGCGCGGCGGGCATTCCTAAACCTCTCCCGTCCTCCGGGCCCAAATCGCTGCGGGAGATGCCGCATCCTC TGGCCACCTCCAGCAGCGAGGAGATGGGGCCGGCTCTCACCCCCAGCCCCGACCTGCTGCTGCCCCGCAGCATCGCCGA CAAGGATCTCAGTCTACCCAATGGCACACCAGTTGACACTTCTAGCCCAGCCTCCTCCTCATCTCTTCTCAACAGACTG CAGCTGGATGATGACTTGGATGGGGAAACAAAAGACTTGTTCGTTACTGTTGATGATCCCAAAAAGCACGTATGCACAA TGGAGACTTACATCACGTATAGGGTTACAACAAAGACTACCCGAGCTGAATTTGATTTGCCAGAGTATTCTGTTCGCCG GCGGTACCAAGACTTTGACTGGTTGAGAAACAAGCTGGAAGAGTCTCAGCCAACACATCTCATTCCCCCGCTTCCTGAG AAATTTGTGGTGAAGGGTGTTGTTGATCGCTTTTCTGAAGAGTTTGTGGAGACCAGGAGGAAAGCATTAGACAAATTCT TGAAGAGAATAACTGATCATCCAGTGCTTTCTTTCAATGAGCATTTCAACGTATTTCTCACAGCCAAGGATCTTAATGC ATACAAAAAGCAAGGAATGGCATTGCTGTCAAAGATGGGGGAGTCAGTTAAATATGTCACAGGAGGTTACAAATTAAGA AGTCGTCCACTGGAGTTTGCAGCCATTGGAGAGTATCTGGACACATTCTCTCTAAAACTTGGTACCATTGACAGGATAG CACAACGGATTATCAAGGAACAGTTGGAATACTTGGTGGAATTACGAGAATATGGACCTATTTATTCAACCTGGGGCGG GCTGGAGGTTGAGCTGTCAGAGCCTCTGGAAGGGGTGTCTGCATGCATTGGAAACTGCTGCACAGCTCTTGAAGAACTT AGTGAAGATATGACAGATGACTTCCTGCCGGTGCTTAGGGAATATATACTGTATTCTGAGTCAATGAAGAATGTGTTGA AGAAGAGAGACCAAGTTCAAGCAGAGTATGAAGCAAAACTGGAAGCAGTAGCCTTGAAAAAAGAAGACCGTCCAAAGGT ACCTACAGATGTTGAGAAATGTCAAGACCGAGTAGAATGTTTTAACGCTGATCTGAAAGCAGATATGGAGAGATGGCAG AACAATAAGCGACAAGACTTTAGGCAGCTACTCATGGGAATGGCAGATAAAAACATCCAGTACTACGAGAAGTGCCTTA CAGCATGGGAGTCAATTATACCACTATTGCAAGACAAGCCAGAGACCAAATAAGAAGTACCTTCATGGACAGTCTAGCA CTTCTGTGCTCAGTACCACTAGACATACTGGAACTCTATGAAGGTCTCTTTTTTTTTTTTGTCAACTGAGATGCCAGCT GTGCTCAGGCTGGAACAGACCCTCTGAAGACTATTTGACTTTTTTCCTCATTTTCTTTGTAAACTGGGGTATGTTTCAT CTTTTTGAGGTATCTTGAATGGTTCCTTCTCTATCCTATGGAGTGACATGGGGCTTATAGTGAAAGTGCATGGGGATCT TGATAAAACTTACCTCTTTAGCCTGGAAGGAACTGATGAGTAGAACACTAAAAAGATGAAAATAAAACTCTACTGCAAG GTGCCAAAATGACATCTTTATTGCTA