GEISHA - A Chicken Embryo Gene Expression Database
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PLN
phospholamban

Gene
Official SymbolPLN
Official Full Namephospholamban
CGNC ID11054
also known asPLB, cardiac phospholamban
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205410
PolypeptideNP_990741
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4197
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular FunctionATPase inhibitor activity, calcium channel regulator activity
Biological Processcalcium ion transport, regulation of calcium ion transport
Cellular Componentintegral component of membrane, mitochondrial membrane, sarcoplasmic reticulum membrane
Links to other databases
Entrez Gene396378
Ensembl Gene
KEGGgga:396378

Entry 1

GEISHA IdPLN.Wang.1996Data SourcePublication
Complete cDNA Template Probeshow
TTAGTGTAATCGTCAGGCTGCCCTTTTTGACCTTGTTAGCTACCCGCAGCGACTGTATTACCAACTCTGTTTCTCTTTA
CGCACACTGCAGGTGGTGACAGCATCATGGAGGACTAACAAGTAAGCTCCACAAAGGCTGTCTAAACAAAAAGAGAAGA
TAACAGGCACTTTACACTGTTCCTGACAACTCCTCTCCTTTCCTGCTCTTCTAAAACCTCTGATTTGTCCTCTGCTTTC
TTGCTGCCATGGAGAAGGTCCAATACATAACCCGCTCTGCTCTGAGGAGAGCCTCAACTCTTGAGGTCAACCCACAAGC
ACGCCAAAGGCTCCAGGAGCTCTTTGTGAATTTCTGCCTGATCTTAATTTGCCTCTTGCTGATCTGTATCATTGTGATG
CTCCTCTGAAGTTCCAGCACTTCTCTGCACTGTTCTCTAGGAAAGCCTCCCAAAAGGAAGAGCGACCTCCACTTCCAAC
CCCAATGCAAGGATCCCCTTGGGAGAGGGGCTAGCACTTGGACTAAGGCTGTGCTGTGTGCCAGCCATCGCGCTGCTCT
TACTGCCTGCCACATGTATTAAAAACACACTTCTGTGCTGAACAGTGTCTAAGAGCCTGTTGTTACACAGCTGTGCATG
ACCTAATTTATCTGTTCAGTCAAGAGATGTCTGTTCTGAGTGGCACAGGGAACTGCCTCTCCAGAGGGCTGGTAAGTCT
CCCCATGTTTTAGCCAGTTCTCCATGGGTTAGCCACTACAGACAAAACAAGAAGAGATCCTGAAAAAGTGCACTGAGTT
TCTCTGGAAGTCCATAAACCATTGGTCATGTTCCAAATTCAGCCCAAAGAAGAGCTGCTGGCAGACATACCACATACTG
CACAGAGTAGGAGAACATCTGCTCTGAGTCCTAAAACATGCTGTATCTTTGTGCTATGAACTGAAGGCATTCACCTTGT
TCTAGCATTTTTATGTGAATTAAAGTAAAACAAAAAGGTATTCTCTGAACCAGATTTTTTTTTATTATTTCAAATGTTT
GGCTTAAATTTAAAGGATTGTGTATGTATGTATAACATATAAATGTACATATAACGTATGCATGTATTTCTATGCACAC
GCACCTTGGATTTGAAAACAAAAAGCCAATTTTTTTTTCACTGCATTTGTCAGCTGCTCCATTTTCACTTGTCATTTAA
TTCTGTAAGGTTATATCAAAGATTTTTCAGTATGTTTTTGCAGACAAATGCATGCTACCATACTGGAAAAGATTTCATT
TTCTGTAAGTAGCATAAACAATTGGCACAAGAAAACAATCAGTGTACAGCCTGCTATAATTCACATAATAATTGCCCGA
GTTTAAAACTACAGATAGTTTGGTATTTGCCACTGCCATTGTATCGTGACGTTACATTTGATGTGATAAAGACATATAT
TGGTTTTCAAGTCCATTGTTAAGAGGTTAAACTACAGATAGTTTGGTAATTTGCCACTGCCAATTGTACGTGACTTACA
TTGATGTGATAAAGAAAAAAGCTTTAGGTCATTTTTACTACTGCAAATGGGGCGTATTACAGAAATACAAGCAACACCA
CCATCCTCAACTGCAAATGACTATTAGAGAACAAGTGAGTATTTTCCTAAGATAAATGACACGTATCATTATTTGCAGG
AGGAAGAACATCACAGAAAAATGTTTAGCATGTGAAACAGTCTAGAAAAATAAAATAAGAAGCTTCTGCTCCAGCAGAT
ATCAATAACGGGCCTGAGCGGGCTTCCATCCCTCTCACATGTCGCTGGTGTTAGGTTAAATGCTAGAAACATTACAGTT
TGAAACAAAGAAAGCTCAAGAATCGCAGAGATCAGACATCTGTTTTAAACAGGCACCTTACTACAGCACCCTAGGCAAA
CAATCGCATTGATGAATGCAGAAAACCAAATGAAGTTTGTCTTAATCTTGTATTCTGTCTTTAAAACAACTTAAAATAA
ATAAAAAGTTGACGTGACTCTGTGCATTACACTCCATAGCTTACAGCAGTAGTACAGAAAGAGTTCTCTGTCTTGATTT
ACAGCACGAGGATCGGGTACAGGATCAGTGTGCTAATAACAGACCAGATTCACCTGTGAGAATGGACTGGTCTACCCTC
AGAGTTGTAGATTTGATAGAAGTGATTCTTATATCAGCAGGAACCTTGTCTCCAACTGCCACTTCCACAATATCACCTG
GACAATGTCTCTTGCTTTGATTCTCTGAAGCTCTTCCGATCTTGTCGATACACTTTACCCATTTCTGGTTCATATTCTT
TAAGAGTTAACAACTGAGCAGGAAGGGAAGAAATCTTTGAAGAAAAAAAACCTCTTATATTGAATGTAATGCAAGCACA
GTGGTGACGCTCTTCCCAACTAGCAAATAGGTACAGTGAGAGAGCAGATCTCTGAAGTAAGGTTAGTCACTAGATGTAG
TTAGTTACTGTATGAGGATTAAGACAAATACTGATTTAACCAGCAACACACACGTCCATTTCAAGTCATAATGCCTAGA
ACTGTCAATATAACCTCAATTACCTGTTCGAGCCATTCTGACCATCTTCACAAATGCATGGTTTTGCCAAACATTCGAC
TTTTGCCTATCACTACTACTACTTAAAAGGAGGAAAGCCACACACTGTACTACTTCTGTGGGGAAAATACAATAATAGT
TACTTTATTCTATTTTTAAATCCATACTTATCTGCGATAGCAGGGTTTCCATACTTGCTTTTCTCATACAGGCATTTTA
GATTACTTTGGACTTATTTCTACTGGTGTGTGCTGACTTATTTCAGTACACTTCTACTGGAGAGAGCTGACAGTTTTAT
AGCACTGAAAACTTTCTAGGAGAAAAGGTGCCCAGAGTAAAATATCAGTACACATTCTGAGATCATTTTGGGATCCTAG
GACCTACAAGCCCTAGTGAAAGCAGAGCATTGCTAAATAAAGAAAAAACAGCCTCCCTATAAAAATCAAAATACCTGCT
TTTCTCTTATGTACCTCAAAAGCCATTAATCATTTAAAGACAATAAGCAAACAAGAATAAACCAAGGTGCTAATGCCTT
GTTACAGTCACTATCGACTAAGTAGTGA
CitationWang DZ, Hu X, Lin JL, Kitten GT, Solursh M, Lin JJ. Differential displaying of mRNAs from the atrioventricular region of developing chicken hearts at stages 15 and 21. Front Biosci. 1996 Jan 1;1:a1-15.
CopyrightCopyright © 2015 Frontiers in Bioscience. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_205410.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 15
Outflow Tract
AV canal
19-21
stage 21
Myocardium
trabecular myocardium

Entry 2

GEISHA IdPLN.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
GTTACAGAGACCACAGGCAGCTGCCGTCACGCTCCCAGGAGCCTGCAGCAGAGGTGGTGACAGCATCATGGAGGACTAA
CAAGTAAGCTCCACAAAGGCTGTCTAAACAAAAAGAGAAGATAACAGGCACTTTACACTGTTCCTGACAACTCCTCTCC
TTTCCTGCACTTCTAAAACCTCTGATTTGTGCCCTCTGCTTTCTTGCTGCCATGGAGAAGGTCCAATACATAACCCGCT
CTGCTCTGAGGAGAGCCTCAACTATTGAGGTCAACCCACAAGCACGCCAAAGGCTCCAGGAGCTCTTTGTGAATTTCTG
CCTGATCTTAATTTGCCTCTTGCTGATCTGTATCATTGTGATGCTCCTCTGAAGTTCCAGCACTTCTCTGCACTGTTCT
CTAGGAAAGCCTCCCAAAAGGAAGAGCGACCTCCACTTCCAACCCCAATGCAAGGATCCCCTTGGGAGAGGGGCTAGCA
CTTGGACTAAGGCTGTGCTGTGTGCCAGCCATCGCGCTGCTCTTACTGCCTGCCACATGTATTAAAAACACACTTCTGT
G
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Outflow Tract
Ventricles
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4197

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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