Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

PLN
phospholamban

Gene

Official Symbol	PLN
Official Full Name	phospholamban
BirdBase ID	BB-GG15985
CGNC ID	11054
also known as	PLB, cardiac phospholamban
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_205410
Polypeptide	NP_990741
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4197

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function	ATPase inhibitor activity, calcium channel regulator activity
Biological Process	calcium ion transport, regulation of calcium ion transport
Cellular Component	integral component of membrane, mitochondrial membrane, sarcoplasmic reticulum membrane

Links to other databases

Entrez Gene	396378
Ensembl Gene
KEGG	gga:396378

Entry 1

GEISHA Id	PLN.Wang.1996	Data Source	Publication
Complete cDNA Template Probe	show TTAGTGTAATCGTCAGGCTGCCCTTTTTGACCTTGTTAGCTACCCGCAGCGACTGTATTACCAACTCTGTTTCTCTTTA CGCACACTGCAGGTGGTGACAGCATCATGGAGGACTAACAAGTAAGCTCCACAAAGGCTGTCTAAACAAAAAGAGAAGA TAACAGGCACTTTACACTGTTCCTGACAACTCCTCTCCTTTCCTGCTCTTCTAAAACCTCTGATTTGTCCTCTGCTTTC TTGCTGCCATGGAGAAGGTCCAATACATAACCCGCTCTGCTCTGAGGAGAGCCTCAACTCTTGAGGTCAACCCACAAGC ACGCCAAAGGCTCCAGGAGCTCTTTGTGAATTTCTGCCTGATCTTAATTTGCCTCTTGCTGATCTGTATCATTGTGATG CTCCTCTGAAGTTCCAGCACTTCTCTGCACTGTTCTCTAGGAAAGCCTCCCAAAAGGAAGAGCGACCTCCACTTCCAAC CCCAATGCAAGGATCCCCTTGGGAGAGGGGCTAGCACTTGGACTAAGGCTGTGCTGTGTGCCAGCCATCGCGCTGCTCT TACTGCCTGCCACATGTATTAAAAACACACTTCTGTGCTGAACAGTGTCTAAGAGCCTGTTGTTACACAGCTGTGCATG ACCTAATTTATCTGTTCAGTCAAGAGATGTCTGTTCTGAGTGGCACAGGGAACTGCCTCTCCAGAGGGCTGGTAAGTCT CCCCATGTTTTAGCCAGTTCTCCATGGGTTAGCCACTACAGACAAAACAAGAAGAGATCCTGAAAAAGTGCACTGAGTT TCTCTGGAAGTCCATAAACCATTGGTCATGTTCCAAATTCAGCCCAAAGAAGAGCTGCTGGCAGACATACCACATACTG CACAGAGTAGGAGAACATCTGCTCTGAGTCCTAAAACATGCTGTATCTTTGTGCTATGAACTGAAGGCATTCACCTTGT TCTAGCATTTTTATGTGAATTAAAGTAAAACAAAAAGGTATTCTCTGAACCAGATTTTTTTTTATTATTTCAAATGTTT GGCTTAAATTTAAAGGATTGTGTATGTATGTATAACATATAAATGTACATATAACGTATGCATGTATTTCTATGCACAC GCACCTTGGATTTGAAAACAAAAAGCCAATTTTTTTTTCACTGCATTTGTCAGCTGCTCCATTTTCACTTGTCATTTAA TTCTGTAAGGTTATATCAAAGATTTTTCAGTATGTTTTTGCAGACAAATGCATGCTACCATACTGGAAAAGATTTCATT TTCTGTAAGTAGCATAAACAATTGGCACAAGAAAACAATCAGTGTACAGCCTGCTATAATTCACATAATAATTGCCCGA GTTTAAAACTACAGATAGTTTGGTATTTGCCACTGCCATTGTATCGTGACGTTACATTTGATGTGATAAAGACATATAT TGGTTTTCAAGTCCATTGTTAAGAGGTTAAACTACAGATAGTTTGGTAATTTGCCACTGCCAATTGTACGTGACTTACA TTGATGTGATAAAGAAAAAAGCTTTAGGTCATTTTTACTACTGCAAATGGGGCGTATTACAGAAATACAAGCAACACCA CCATCCTCAACTGCAAATGACTATTAGAGAACAAGTGAGTATTTTCCTAAGATAAATGACACGTATCATTATTTGCAGG AGGAAGAACATCACAGAAAAATGTTTAGCATGTGAAACAGTCTAGAAAAATAAAATAAGAAGCTTCTGCTCCAGCAGAT ATCAATAACGGGCCTGAGCGGGCTTCCATCCCTCTCACATGTCGCTGGTGTTAGGTTAAATGCTAGAAACATTACAGTT TGAAACAAAGAAAGCTCAAGAATCGCAGAGATCAGACATCTGTTTTAAACAGGCACCTTACTACAGCACCCTAGGCAAA CAATCGCATTGATGAATGCAGAAAACCAAATGAAGTTTGTCTTAATCTTGTATTCTGTCTTTAAAACAACTTAAAATAA ATAAAAAGTTGACGTGACTCTGTGCATTACACTCCATAGCTTACAGCAGTAGTACAGAAAGAGTTCTCTGTCTTGATTT ACAGCACGAGGATCGGGTACAGGATCAGTGTGCTAATAACAGACCAGATTCACCTGTGAGAATGGACTGGTCTACCCTC AGAGTTGTAGATTTGATAGAAGTGATTCTTATATCAGCAGGAACCTTGTCTCCAACTGCCACTTCCACAATATCACCTG GACAATGTCTCTTGCTTTGATTCTCTGAAGCTCTTCCGATCTTGTCGATACACTTTACCCATTTCTGGTTCATATTCTT TAAGAGTTAACAACTGAGCAGGAAGGGAAGAAATCTTTGAAGAAAAAAAACCTCTTATATTGAATGTAATGCAAGCACA GTGGTGACGCTCTTCCCAACTAGCAAATAGGTACAGTGAGAGAGCAGATCTCTGAAGTAAGGTTAGTCACTAGATGTAG TTAGTTACTGTATGAGGATTAAGACAAATACTGATTTAACCAGCAACACACACGTCCATTTCAAGTCATAATGCCTAGA ACTGTCAATATAACCTCAATTACCTGTTCGAGCCATTCTGACCATCTTCACAAATGCATGGTTTTGCCAAACATTCGAC TTTTGCCTATCACTACTACTACTTAAAAGGAGGAAAGCCACACACTGTACTACTTCTGTGGGGAAAATACAATAATAGT TACTTTATTCTATTTTTAAATCCATACTTATCTGCGATAGCAGGGTTTCCATACTTGCTTTTCTCATACAGGCATTTTA GATTACTTTGGACTTATTTCTACTGGTGTGTGCTGACTTATTTCAGTACACTTCTACTGGAGAGAGCTGACAGTTTTAT AGCACTGAAAACTTTCTAGGAGAAAAGGTGCCCAGAGTAAAATATCAGTACACATTCTGAGATCATTTTGGGATCCTAG GACCTACAAGCCCTAGTGAAAGCAGAGCATTGCTAAATAAAGAAAAAACAGCCTCCCTATAAAAATCAAAATACCTGCT TTTCTCTTATGTACCTCAAAAGCCATTAATCATTTAAAGACAATAAGCAAACAAGAATAAACCAAGGTGCTAATGCCTT GTTACAGTCACTATCGACTAAGTAGTGA
Citation	Wang DZ, Hu X, Lin JL, Kitten GT, Solursh M, Lin JJ. Differential displaying of mRNAs from the atrioventricular region of developing chicken hearts at stages 15 and 21. Front Biosci. 1996 Jan 1;1:a1-15.
Copyright	Copyright © 2015 Frontiers in Bioscience. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_205410.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 15

Outflow Tract

AV canal

19-21

stage 21

Myocardium

trabecular myocardium

Entry 2

GEISHA Id	PLN.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show GTTACAGAGACCACAGGCAGCTGCCGTCACGCTCCCAGGAGCCTGCAGCAGAGGTGGTGACAGCATCATGGAGGACTAA CAAGTAAGCTCCACAAAGGCTGTCTAAACAAAAAGAGAAGATAACAGGCACTTTACACTGTTCCTGACAACTCCTCTCC TTTCCTGCACTTCTAAAACCTCTGATTTGTGCCCTCTGCTTTCTTGCTGCCATGGAGAAGGTCCAATACATAACCCGCT CTGCTCTGAGGAGAGCCTCAACTATTGAGGTCAACCCACAAGCACGCCAAAGGCTCCAGGAGCTCTTTGTGAATTTCTG CCTGATCTTAATTTGCCTCTTGCTGATCTGTATCATTGTGATGCTCCTCTGAAGTTCCAGCACTTCTCTGCACTGTTCT CTAGGAAAGCCTCCCAAAAGGAAGAGCGACCTCCACTTCCAACCCCAATGCAAGGATCCCCTTGGGAGAGGGGCTAGCA CTTGGACTAAGGCTGTGCTGTGTGCCAGCCATCGCGCTGCTCTTACTGCCTGCCACATGTATTAAAAACACACTTCTGT G
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.

no images

Data from NCBI Unigene EST Profile
Unigene ID: Gga.4197

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN

Home

Contact

PLNphospholamban