GEISHA - A Chicken Embryo Gene Expression Database
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NFATC3
nuclear factor of activated T-cells 3

Gene
Official SymbolNFATC3
Official Full Namenuclear factor of activated T-cells 3
CGNC ID2472
also known asnuclear factor of activated T-cells, cytoplasmic 3|cytoplasmic nuclear factor of activated T-cells 3|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3, NF-ATc3, T cell transcription factor NFAT4, NFATx, Nuclear factor of activated T-cells, cytoplasmic 3 , NF-AT4
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_414078
PolypeptideXP_414078
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.19337
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4775ENSG00000072736MIM:602698
Mouse18021ENSMUSG00000031902All phenotypic alleles (6):Targeted, knock-out(3) Targeted, other(3) MGI:103296
Xenopus100216091, 398297493917
Zebrafish561772, 492400ENSDARG00000076297ZDB-GENE-041111-41, ZDB-GENE-100922-25ZFIN:ZDB-GENE-041111-41, ZFIN:ZDB-GENE-100922-25
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene415711
Ensembl Gene
KEGGgga:415711

Entry 1

GEISHA IdChEST756f3Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGCGGCTCGAGCCGAATCACTGGAAAAACTGTTGCTACAGCAAGTCAGGAGATAATCATTGCCAGCACAAAAGTTTTGG
AAATACCACTTCTTCCTGAAAATAATATGTCAGCCAGTATCGATTGTGCAGGTATTTTGAAACTTCGCAATTCAGATAT
TGAGCTCCGTAAAGGAGAGACAGATATTGGAAGGAAGAATACCAGAGTCCGACTCGTGTTTCGTGTTCACATCCCACAA
ACTAGTGGAAAAGTCTTATCGCTGCAGACTGCTTCCATACCTGTTGAATGCTCTCAGCGATCTGCCCAAGAACTTCCTC
AGATTGAGAAGTACAGCATCAATAGTTGCTCAGTCAATGGAGGCCATGAAATGATGGTAACAGGATCTAATTTTCTTCC
AGAATCAAAAATTATATTTTTTGAAAAAGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGGGAAAATAATTAGGGAA
AAGTGTCAAGGGGCAAACATCATACTTGAAGTTCCACCATACCACAACAAAACTATTACAGCTGCAGTTCAGGTGCAGT
TTTATCTCTGCAATGGCAAGAGGAAAAAAAGCCAATCACAGCGTTTTACTTCTATTTCACCTAACTGTCATCAAGGGAT
TGAAGCCAATGAAGATGAGTTGCTCACAAATGGCACAGAAAATGAGTATATGGAAAGGCCTTCACGGGACCATCTCTAT
CTTCCTCTTGAGCCATCATATAGGGAATCATCCCTTAGTCCAAGCCCTGCCAGCAGCATTTCCTCCAAAAGTTGGTTTT
CAGATGCTTCCTCTTGTGAGTCAATTTCCCATGTTTATGATGAAGTAAAATCGAAGCTAAATGAAGCAGCTGCTCGATT
TACCCTTTGGCTCTCTCTGGCCTCTCCGGGTGGTTCGCCCAAAAGGTCTATGAAGAATCTTTGGCACAGCCCTATGGAT
TTGGGCATCCTTGTCACCAAAAAGTCTCCCTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 4
Area Pellucida
Early Mesoderm
 
7-12
stage 9
Paraxial Mesoderm
 
13-18
stage 16
stage 18
stage 18
Allantois
Pharyngeal Arches and Clefts
Somites
 

Entry 2

GEISHA IdNFATC3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAAACAGAAGGAAGCAGAGGAGCCG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGATAGGAAGACCAGACCGTTCGTTGcDNA Template Length1144
Forward cDNA Template Probeshow
GGATCGNTCNTGTACATCATTGGACTGCATAGGCTGATAGGAAGGCCTCACAGGAGGCGCTGACGTTACCTGAAAAGAC
TGAACCACAGTAGGGGGCAAAACATGACACTCTTCGCTTGGACTAAGGTTTCTACCTTGCATATGCGACAGGTGGGATA
CTGCTGAGGTCACCATTGCTGCATATGATGGTTGAACTGGACACACAAGGCTCCTGGGTGATGTAGACAGTAAACTGTC
ATGAGGATGCCCTTGCTCTGGTGAAGGCAACTGAGTTTGGATAGAATGTAGGCCCTGGATGTTGCTTGTGTGAGGCAGT
GCCAAAGATGGAACAGTAGACAAATCCACCTCATCTCTGTGTTCTTGCTTCATTATAACTGGTGTATAAGTAAAACGCT
GTGATTGGCTTTTTTTCCTCTTGCCATTGCAGAGATAAAACTGCACCTGAACTGCAGCTGTAATAGTTTTGTTGTGGTA
TGGTGGAACTTCAAGTATGATGTTTGCCCCTTGACACTTTTCCCTAATTATTTTCCCTTCTACCTCCCACTGAGGTCGT
CCATCTTGTCCTTTTTCAAAAAATATAATTTTTGATTCTGGAAGAAAATTAGATCCTGTTACCATCATTTCATGGCCTC
CATTGACTGAGCAACTATTGATGCTGTACTTCTCAATCTGAGGAAGTTCTTGGGCAGATCGCTGACAGCATTCTACATG
TATGGAAGCAGTCTGCAGCGATAAGACTTTTCCACTAGTTTGTGGGATGTGAACACAAAACACGAGTCGGACTCTGGTA
TTCTTCCTTCCGATATCTGTCTCTCCTTTACCGAGCTCAATATCTGAATTGCGAAGTTTCAAAATACCTGCCACATCCA
TACTGGCCTGACATATTATTTTCAGGGAAGAAGTGGTTATTTCCAAACCTTTTGTGCTGGCAATGATTATCTCCCGACT
TGCTGTACCAACAGTTTTTCCAGTGATTCCGTGCCACTTGTTAAAATGCATGCACGCCCTTAAGTACCGATCTTCTGCA
GTTCCCAAAAACTTTTGCAGGTTTACAGCTTTTTCCTTGTACCCCGGAGCTTTACTAAAGGAAGGTCCCCCCTAGATGC
TTTTTAGGCTCCTCTGTTACCTANGGTTAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 12
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Somites
Widespread Expression
 
13-18
stage 13
stage 18
Allantois
Blood Islands
Blood Vessels
Gut
Intermediate Mesoderm
Lateral Plate Mesoderm
Limb Buds
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somites
Widespread Expression
 
19-24
stage 19
stage 21
stage 23
Allantois
Gut
Limb Buds
Pharyngeal Arches and Clefts
Somites
Widespread Expression
 
25
stage 25
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.19337

Mouse

EmageMGI:103296
EurexpressMGI:103296
MGI GXDMGI:103296

Frog

Xenbase493917

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041111-41, ZDB-GENE-100922-25
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