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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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EDA
ectodysplasin A

Gene

Official Symbol	EDA
Official Full Name	ectodysplasin A
CGNC ID	51639
also known as	ectodysplasin-A\|ectodysplasin A1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_003641131
Polypeptide	XP_003641179
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.17009

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	769069
Ensembl Gene	ENSGALG00000004481
KEGG	gga:769069

Entry 1

GEISHA Id	Eda.Drew.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGGGTGCGGAGCGCAGGGGGGAGGCGGCCCGCGGCGGCTGCTCCTGTGCCGGCGCCGGGAGCTGGCGCCTGTTCCTCG GCTTCTTCGCCCTCTCGCTGGCTTTTTTTGTCCTCCCCCTCGGCTGCTACCTGGAGCTGCGCTCCAAGCTCCGCCGCGA CCGCGGCCCTCAACCCGCGGCCCCGCCGAGACGCGACGGAACGGCGGCGGCCGCCGCTCCCGGAGCTTCCGCCCGCCCT CCCGGCCCTGCAGCCTCCCTGCGCGCAGATGTGGCCCGAGGCAGCAGCTCTCGGCACCCGGCACAGCTCAGGGCTGTGG CGGTGACACTGCAGGGCTGCAGCCTGGGACCCCCCCTCGGTCGCTGTGCTGTATCAGAGTGGTCTGGTGGGACAGCAGG CAGTGGGAAGCACCAACCCTCCTGCTGCCAGCAGCACTACTGGGCGGTGCTGTGTGGGCTCCTGGTGAGCTCAGGGCAC GTCTGGGTGCCAGGTTTGAGAGAAGGCGGTGTGGTGGTGCCTGAGGTGCTCGCTTTGATAGTGGTGGCTGCTGGGGGTG CTCACGGAAGGTGCAGTCAATTGAAGAACCCAACCATTGCAGTGTGCCGTGGGGCTGGAGCATCAGCACATGTGCACGG CCAGCCTGCATTGAGCACGAGAGGCAGTGATGGCAATGCCAACCAGAGCAGCTCCTGTCACTGTGGGGATGGAGTACCC ATGGCCACAGCCACCATCACCTCACCACCACCTCTCTCAAGGTCCATTCCCTTCAGCAGTGTCTGTGGAGCTCGTGGTT ACAATGCTGAGGCTTCTGGAGCTGCCGCTGGAACCGCAGGCTCTGCTGCTGACCTCCCGAGCCAAAAAGCAGCGGCGGC GCTCGCAGGGAACGGCTCCGAGGGGCTCCGTTTGGCTCCCGGTCCTCTCGCGCTGATGAGCTGCAAAGCTGCAAATGGA AGCGTGAATTGGATTCGAAGGGCAGCGTTCGGTACCGGCGATGAGGACGGCTTCGTGCCTTCTTGCTGGTGCGAGGCTG CGGGTTGGGTCGGAGGGCTGAAGGACGCGCTGGCCTTGCTGAACTTCTTCCACCCCGAAGAAAAGCTGCACGTGGGAGA AGGCAGACGTGTCCGCCGGAACAAGAGGAGTAAGGGCAGCGAGGGGCCGGATGGCCTGGTGAACCTGTGCCAAGTCGTG CTGCTGGGCAGCCTTGCCCTTAATTCTTCCACAATACTTGAGGCTCTCCGGTCATTCCAGTCATTGCCGCCAGGGAAAG TCCTCAATGAGCGCTCGTTGGTTTCAGTGCTGCTGGTGGGTTTTGCTGGAATGGAAACACGAAGGGCTCTTTGGCTGCT GCCCTCACAGCCAGGGCTGCACGGCGCAGGGTCAGCGGGGCGCCCACCCATCACCAGGGTATGGCACCGATCGCCCGTG GTGCTTATGCAGCAGATGTTGGGGCCGACCCCATCCCTGCAGTGCTGCGCAGTGCCCTCTGCATGGCCACAGGTGCTGC CCTGCACAGCAAAGGCCCACCTGCTGCAGATCCCCGCCTTGGTGTTGGCTGCAGGGATTCTGCTGGAGGAAGCTCTTGG TAAGAAGGCTGGTCCTCCGGGACCCAACGGTCCCCAAGGGCCACCAGGCCCCCCCGGGCCCCAGGGTCCCCCTGGCATT CCCGGCATCCCGGGGATTCCTGGGACCACTGTGATGGGACCACCCGGCCCCCCGGGCCCACCCGGCCCTCAGGGCCCCC CAGGGCTGCAGGGCCCCTCAGGTGCCACAGACAAGGCCGGCTCCCGAGACACCCAGCCAGCTGTGGTCCACCTTCAAGG CCAAGGCTCAGCCATCCAAGTGAAGAATGGTGGAGTCCTCAATGACTGGTCTCGCATCACTATGAACCCCAAGGTGTTT AAGCTGCATGCCCGCAGTGGGGAGCTGGAGGTACTGGTGGACGGCACATACTTCATCTATAGTCAGGTAGAAGTGAGTA CGGTCCTAGGCCTAACTCCTATTCTTGTGTTCCAATGGAAGCCTTGCATGAACCACGAGAGGGCTCCAGACAACTAGCG AATGCCAAGAACTTGTATGTGCTTTTAACCACTTCGTGCTCTAGGAGATGTGTGTCGGAGGAAGAAGTTAATAGAGTTG GGAAGCGCGAGCTCACACGTTCTGCCACGACACCAGCTGCAGGAGCCTAGTCACTGTGACACATGCACAGAAGCCCAAC CGAATCCCATGGGCCACCAATGCCTTTTCTTCTTTCCCTCCACATTGTCTGTGCAGTCACTCACCCGCAAATCTAAACC TTATTGCAGAGTGAGAGTCCCAGCAGGAAGCTGGGCTCTGTGCTTTACGAGGGATGTCGTGCCAAACCCTCACGACTTG GGATGTTTGGGCAGCCGTGGCACTCTTTGTAAGCCCAGGACTCCCAGCCCAGGTGATTCCATTTTGCCCCCACTTTCTG TGCATAGCTCCAGCCTGATGCTGTGCCCCAGCAGCCTCGCTGTGCAGCGGGACGGCTCAGCGCCTACGTTATTTGGCAC CAATGATGGGTGTACAGAGCTGCTTAGGTAGAA
Citation	Drew CF, Lin CM, Jiang TX, Blunt G, Mou C, Chuong CM, Headon DJ. The Edar subfamily in feather placode formation. Dev Biol. 2007 May 1;305(1):232-45. Epub 2007 Feb 16.
Copyright	Reprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
Comments	The templates used to generate riboprobes were cEda: 80 nt of ORF and 333 nt of 3′UTR. As information provided is insufficient to verify exact sequence used to synthesize the probe easily, the sequence below was obtained from NCBI (Acc# XM_420158.1)

Stage

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Location (click to highlight)

Comments (click to highlight)

25-30

stage 30

Surface Ectoderm

Interplacode zone.

Entry 2

GEISHA Id	EDA.Houghton.2005	Data Source	Publication
Complete cDNA Template Probe	show ACATACTTCATCTATAGTCAGGTATACTACATAAACTTCACAGATTTTGCCAGCTATGAGGTGGTGGTGGATGAAAAAC CCTTTCTGCAATGCACTCGGAGTATTGAGACCGGCAAGACCAACTTCAATACCTGCTATACGGCCGGGGTCTGCCTCCT CAAAGCCAGGCAGAAGATTGCTGTGAAAATGGTCCACGCTGACATCTCCATCAACATGAGCAAGCACACAACTTTCTTT GGGGCCATCCGCCTAGGAGATGCGCCAGCATCCTAGATGAACTGGGCACGTCCAAGGAGACTGACAGGACTGCACCGTG CTGCTGTTCATAAGCGTATCAGTATTTCAGGGGGTTCTGTAATCCGGCCATAAGGAAAACTGATCCAGAGCTATTTATT CCTATATGTGAATGCAGGAAGCACAATGTCTTCTGTGACTTGCACGGAGACTTGGATCAAAAAGCTAGCTGAAAAAGCG TGGTGAGGAAGAAAGGCTGTCGTGTCCGCCTTGTCTCAGTATTTCAAGTATTACTGCACTGATATTCTGCTCTGTGATC TTCACGTGGGGCTTGTTGGGAGTGACGTGGGTCTCTGCTTTTATGTTGCACTA
Citation	Houghton L, Lindon C, Morgan BA. The ectodysplasin pathway in feather tract development. Development. 2005 Mar;132(5):863-72. Epub 2005 Jan 26.
Copyright	copyright is held by the authors. Published by the Company of Biologists Ltd.
Comments	The probe was amplified by PCR using the following primers: 5′-ACATACTTCATCTATAGTCAGGTA-3′ and 5′-TAGTGCAACATAAAAGCAGAGA-3′ and was extracted from NCBI Acc# XM_003641131.1.

Stage

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Location (click to highlight)

Comments (click to highlight)

31-36

stage 31

stage 32

stage 33

stage 34

stage 36

Feathers/Scutae
Surface Ectoderm

Data from NCBI Unigene EST Profile
Unigene ID: Gga.17009

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN

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EDAectodysplasin A