GEISHA - A Chicken Embryo Gene Expression Database
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TEF
TEF, PAR bZIP transcription factor

Gene
Official SymbolTEF
Official Full NameTEF, PAR bZIP transcription factor
CGNC ID9066
also known asVBP, transcription factor VBP|thyrotroph embryonic factor homolog|thyrotrophic embryonic factor|vitellogenin binding protein (VBP), beta/beta isoform|vitellogenin gene-binding protein, beta/beta isoform
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_205382
PolypeptideNP_990713
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human7008ENSG00000167074MIM:188595
Mouse21685ENSMUSG00000022389All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:98663
Xenopus550073, 494759962731
Zebrafish30674, 553686ENSDARG00000039117, ENSDARG00000038401ZDB-GENE-990415-264, ZDB-GENE-050522-224ZFIN:ZDB-GENE-990415-264, ZFIN:ZDB-GENE-050522-224
Gene Ontology
Molecular FunctionDNA binding, sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processpositive regulation of transcription from RNA polymerase II promoter, more...positive regulation of transcription, DNA-templated, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene396342
Ensembl Gene
KEGGgga:396342
GEISHA IdTEF.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGTCCAGGCGAGCGGGTTG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGCGGTAAACTTGTGCTTGCGAGGcDNA Template Length661
Forward cDNA Template Probeshow
GGCTTATTGCTCGGTTGAAACTCCCCCCCGGCACCCTGGGAAGCACTAAATCAGCAGGGTCTGGGTTAAAATTCACCTC
ACCTTCTACACGGTCAGGATCAATGGGGCTGGTTGTATTTCCCCCGTTTTGCGGGGGGAATCCCGTGCTGAAGGCTGCT
TCAAATTGCTGGAAAACGGCGAAAAACAACAAAAACCCGGAAAAACCATGGAAACCCCGGCCTGCCTCCTTTTCTTCCA
GTTAACCCAAAGGCTTAATTGAATTCGGGTTCAATTCCAGGTAATAAGGGTTGAAAGAAATTCCTTTCTCCAGAAAAAT
TTAATCCAAACCCAGGTCCCCCAGGGGGAAAAACCCCCCATCAAAAGGAAAATTTTGGCCCCAATAAGGTGGAATGAGG
AAACCTAAAATTCCATTGGGGCTGCCGGTTCCCCCCCCTCCTCCCCCAACCTTAATCTTCTTCCCTTATCCGGCCATTT
GGGGGCCCCAGGGAAAGAATAACTCAAGAAGGCCTTCCTGGATTTCGAAAAATCCCAGGAAACCGGGCCCCCCATACCT
TTTGAAACATAAATTTTCCCGGTGCCGGGACGCCCTAAAAAGGCCAAGGGAAGGCCTCAACCCGGGCCGCCCCCCCCCC
CAACCGATCATCTTAAAAAAAAG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
stage 6
Area Pellucida
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
 
7-12
stage 8
stage 11
stage 12
Blood Islands
Forebrain
Head Mesenchyme
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
 
13-18
stage 13
stage 16
stage 17
Blood Islands
Head Mesenchyme
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
Widespread Expression
 
19-24
stage 20
stage 22
stage 23
Widespread Expression
 
25
stage 25
Widespread Expression
 

Mouse

EmageMGI:98663
MGI GXDMGI:98663

Frog

Xenbase962731

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-264, ZDB-GENE-050522-224
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