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RPSAP58
ribosomal protein SA pseudogene 58

Gene
Official SymbolRPSAP58
Official Full Nameribosomal protein SA pseudogene 58
CGNC ID49202
also known as37LRP, 67LR, DMRT1, LBP/p40, LRP/LR, RPSA, lamR, 40S ribosomal protein SA|37kD Laminin receptor
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001007823
PolypeptideNP_001007824
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.34355
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly31106FBgn0003517
Human3921ENSG00000168028MIM:150370
Mouse16785ENSMUSG00000032518All phenotypic alleles (5):Spontaneous(1) Targeted, knock-out(1) Targeted, other(3) MGI:105381
Xenopus394665, 380422972234
Zebrafish394027ZDB-GENE-040426-811ZFIN:ZDB-GENE-040426-811
Gene Ontology
Molecular Functionlaminin binding, laminin receptor activity, structural constituent of ribosome
Biological Processcell adhesion, more...endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA), ribosomal small subunit assembly, rRNA export from nucleus, translation
Cellular Component90S preribosome, cytosolic small ribosomal subunit, nucleus, plasma membrane
Links to other databases
Entrez Gene395181
Ensembl GeneENSGALG00000011951
KEGGgga:395181

Entry 1

GEISHA IdLRP37.Chambers.2006Data SourcePublication
Complete cDNA Template Probeshow
TCGAGGTCGAACGGTATCGATAAGCTTGATATCGAATTCCTGCAGCCCGGGGGATCCACTAGTTCTAGAGCGGGATCCG
GCTTCTATGATTCTATGATTCTTCCTCATTTCAGTATGGTGTTTTGTTTTCCTTACCGTTGTCACCACCACGTGGCAAA
TGTGTGAATTACTCTCTAAAAGAATAGTGATGGATAAATCTTGTAATTTTGGTAAGTACTATCATCCAAGAAGCTGAAG
AATGAAGGGCAGCTTTCTACAAAGTTATCGCTGCAGCAGTCATAATTGCATTACAATATGCTTCACTCATACCAGTCAG
GTAGTTTGTTTCATGCACCTGGTTCTAGCTGCAGTGCCACTAAAGCCTTTGCTAGCCTCGTGCTTGACATTGCACAATA
AGGATATATTTGTCACATAAAGTTAGGTACAGCAGGAAAAAATTCTACAGCCTCACACTGTGAATGAGCACTCTTTTTG
CTGTAATAATCTTCCATTTCATTGCATAAGGAACGTGAAGCACTTTTAGAGCTTACAAACACTTCCAAATTACAGTAAT
AATAGATTTTTTTTTATTGATTCAAACAATTAACAGATGCTGGTGCAATGAAAGGAACATCAGTTGGTCACTGATAACA
TATTTGGTGGAGCTTTGTAGTATCTCAAAGGCTCAGCAAGAAGCAAACCACCTGAAATACCAGGTAGAGTGCTGCCGGG
CAAATCAGTTGGCACCTTAAAGGGGCAAAGGGCAGCCTTGTTCCATGTGAACCATCCACTGGACAGGAAGACGGAAGGT
GATTTTTTGATAGGGGAAGAGGAATTTATACGCAGAATGATGGGCAAGGTGTTACTTTTGCCAGAAACAGGTGCTGGCT
GCCGCTGCACTCCTCAGCCTGCCTTCAGGGTGGCAGAGGAGCACTGTGGAAGAGCCAAGGGACAGGGTCTAGCTGAAGG
TGTGCTGACTCAAAGCCAGCTCGAAAGTGGTACAGTGGTAATGGAGAAGTCTCCCCTACCTATTGAACACACCCCTTTT
TAGCTTCTGCCCAAATAGACACAATAGGTGTAGAAACATGACGGCAAGGAGAATCTCAAAGTTAAGGGAAACGGCTTAA
TGGCAAAATTGGAAGCCAAAGGAATGTGATGAAACGAATGCACAGCAACGTGGTTAGTGTGAACTTGATTTCATTCTCC
TCAGAGTCACATATCAAAACACCCACTGCTCCTTTTTGGGGCGAGGATTGTGGTTAGACTACTTTGGTGCGCAAATCAC
TACTCTTCGGTGTCGCTTAAAGGTAACATCAACTAACCCCTTTTCTCCTGCCGCGGTTTCCCCCATGCCACACACGACC
CGCCCCCACCTGGCCCACAGTCCGCCATGACACACGCAGGCCCTGGGTCGCTAAGCGCCTACTTCCTTAGCAACCCGCG
GAGCCCCGCCTTCCGGTGAACGCGACGCTCCCATTGGCTGGCGGGGAGGGCATATATTGACGTCACACGGCGAAGACTT
TTCTTTTCGTTCGGCGCCCGCCGAGGCCTCCACACGGCGTTGTCCGCGTGAGTCCCGGCGCCGGCGGGGCGGGGCGGTT
GAGGGGCTGGTGGCGGTTGAGGGGCTGGTGGCGGTGCACGCACCTTGAGGCATTAATGGATGTTAGCGAGGCGTTCTCT
GCGCGCTCCCCTCAGCGGGCCGAGCTTCTTTGGGGAGGCTGAGGGGATAGAAGGGTAGGCGCCGGCGCGGGGCACAAGG
AATTGCGCGGCCGGGCGCCCGCCACGTGAGGCGCTGAGCTGGGTGGTTGTGCCCGCAGGTTCCCTGTCGTCGCTTCCTA
AGGGAAACCCCACGATGTCCGGAGGTCTCGATGTCCTGCAGATGAAGGAGGAGGATGTCCTCAAGTTTCTTGCTGCCGG
GACCCACCTGGGAGGCACCAACCTCGACTTCCAGATGGAGCAGTATATCTACAAGAGAAAGAGCGATGGTAGATCCCTG
GGGTGGGAGCCGGAGTGCAGCTGCTGGGCTAGCTGGGAGTTGATGGCAAAACTGGGAAAAAGAGCCAAGTGCTACTGCT
TGAGTTTCCCAGCAGTTTGTGGCCCTGGAAAGTACAGAAATCCAAACAAATCACATTCCTCAAAACAGTAAAACAAAGC
ACAGATTATAGAACACAAATCAATTAGATTGGGGCACCCCTACTGGTTTCTGACTATAGTAATAAGCGTTGTGTCTCAG
TAGTTATCCGTGCTTCTTGTGCTGTTCTTAAGTCTAAACTGCACCATGTTGAAAGGTTCCAGCTCATAGCAGACTCAGG
TCCATATTTATGTGTTGGACCATAATGGCTAGAGTTACACTATCTTAAATCATGTTGCTGTTTTTTTTTCTTGGAACAG
CTTGCTGCTAACTGGAGTTGTAATAACTGCAGCCCTGTAGCAACTTTAAGAGCAGATGAGTGATGTCTTGATTTAAAAA
TTTCTTTACTGGTTGCTCTAAATCTTTCTGTCACCTGTAGGTATTTACATCATCAATCTGAAGAGGACCTGGGAGAAGC
TCCTTTTGGCAGCCCGTGCTATTGTGGCTATTGAGAATCCAGCTGATGTGAGCGTCATTTCTTCCAGGAATACCGGACA
GGTATGGAGTTCTTTATTTACCCAAGGCCTTCAGTCTTGGACGAGGCCTGTTGCCCTGTAGCAGTGCATGTCATTGGCA
GCTTGATAAGAGTGACCCAAATTTTGGCATTTCCAAGAAGGCCAATTTTCTTGTGCTATGGTTGAAGTTTAAAGCAACT
GTATGGAGGGTCCCTGCACAGCCCCAATTCCTGTAGAGTTCAGGGCAGATGTGAGTAGTTGGATGGTATGTTTTTTTCT
TTTAGCCTTATTTGAATACATTCTGCTGGACCTACTCCATTCTTTTGGTCATTAATGTGGCTTTTGGGAGCAAAAAGCA
CCTGATAGACTAAGTTTTTCAAGAGAGGAAATAGTGCTTCTTTTACTGGAAGGGGAATTGTAACAAGTAAACAAACACT
TCAGATTTTTCTTGCAGATTTTAAGCAGAAAAACTTCTGTAGAAGGGGATGCACCATTCAGATGAAATCTAAGTTGTTG
CTGAAGTTTACTGCTGAACTTAATTACTTGTCCTAATCTAGGCAGTGCCACGAACATAGGAGGAAGGCCGGCCTGTGAA
TGATGTTGAGTGGATTTACAAGAGAAAGGTGTGAGCACCTACTTATGCAACTTGCACACTGTTAAAGCTTGATGCTGAG
GTCAGTTCTGACCAATGAGCTCTCAAGTGTCGGAAGTGTGCTACACAAAGCTGTTGGCAGGGTGCTTGCTAATGCCAGG
AGAGGAGCTGCCTCTATGATTGGAGTTTGATAGCAGCCCTCCGACATGCTCTCGTGGCTTATGCTGAGGAATTGGAAAC
TATTGCAAAGAGTAGGAGCTAGCAGTTTAGTCTTAGTGGACACTGTTAAAGTTTGCATATATGTACTAGTGAGCTTGTC
TTGTAGTTAATGCAAGCTATGCTACTGTAGTAAATGGATGCAGAAAATAATGGAGGTGAATGGCTTTTTTTTTTTCTTT
TTATATGGCTCAAGAACAGTCAGGGAGAGCAGGAATGTGATTTAGATATTGGCATTTGTAGGTCAGGTTGATGGTTGGA
TGTGGTGATCTTGAAGGGTCTTTCCAACCTAGATGATTCTATAATCGTGTTTGTTTCATCTACCCTTTTGCTGGTATGG
TGGAGGCTCATACTTTTGAGGTAGAGCATACAACTCAGTTTATCGGGGGAAGAGAAACTTGTTCTTCCTACTGACTTCC
TGCCTTGCTGGTGGATGTGATCTTCTAACTCCTTTTTGTGCTGTTGGTGTAGTTATTTTTAAAAGCAGTATTGTTTTTC
ACTCATTCGGGGAACTGGTACATGAGCCCTGATGTCATAGGAATTGAAACAAGTTTATGTGGTCACTGACAGCACACCA
GGGTGAGTTGATTGAAACTGAATTTCCTACTTCACCTCTTGATTGTTTTGCAGCGTGCTGTTCTGAAGTTTGCTGCTGC
CACTGGGGCTACTCCTATTGCTGGACGCTTCACCCCTGGTACCTTCACAAATCAGATCCAGGCGGCTTTCCGTGAGCCA
CGACTCCTGGTTGTTACAGATCCCCGAGCTGATCATCAGCCACTGACCGAGGCTTCTTACGTCAACATCCCCACCATTG
CGCTGTGCAACACCGACTCCCCGCTGCGCTATGTGGATATTGCTATCCCCTGCAACAACAAGGTTACTGCTTGTAGAAT
TTAAAGCTGCTTTCTCTAGAGCGTACTGTAGATTGCAAGATGTTTTTTGGTAGGTAAGATTACATGTATATCCGGTGTG
ACTCTCAGGGTGATGAGCTAATAAATTTCTGCCAAGCCAAATAGGTAGGTGAGGAGGTTTTGAGCTTGCACGCACACAG
TTGGAACTTGGGAGCTGAGAGCCAACCTGTGGCCAAGGAACTCTCAGTGTAGGATGTGTGCTACAGTAACATGGCAGGA
CTTACTGACAGCCTGAGGGCCTTTGTGGCCCAATGAAAGGAGTTTGGTAGTCAATCTTGCCACAGTTCATGAACATGAA
AGAAAAAGTAATGTGACTTTGTGAAGAATCATAGAATGGTCTGGGTTTGAAAAGGACCACTGGTCGAGTTTGAACCCTC
CTGCTATGTGCAGGGTCACCAAGGAAATAGTCTTACTAGCAGCAAAAAGGTAAAGTCTAGGGAAGTGGGAAACTAGCCT
TTGATCTCTAAACACTGTTACTTACAAAACAATGTAAGCCAAATCTGAGCTTGAACCAAATCTGTCAGATTAATTTCTT
TGTATTAGCATATGGTATGGATGCATAATCCTTGTGTTTGTGGATAAGATTTACACAGACACTGAATAGGAGTACTGAC
TGAGACAAATTCAGATGCAGGTGACTGCGGTGCTGCAGAGGCCTGAAAATATTGCTGTGAATTTGAAAAGCTTCAATGT
CCTGAGTCCATTTACATCATAGCTCTGTCAGGATTCTCTTGCCTAGAAAGAATTGTGTACAAATAAGTTTTCCTCTTAA
AGGTGTGTGAGGGCAGAGGAGGGGAAGGCATTTAAGTATATTTGGAGCAAGATCTTAATGTAACCTTATTCTCCTGTTG
CAGGGAGCACATTCAGTGGGCCTGATGTGGTGGATGCTGGCTCGGGAGGTCCTGCGCATGCGTGGCACCATCTCCCGTG
AACATCCATGGGAAGTCATGCCTGACTTGTACTTCTACAGGGATCCTGAGGAGGTAAAGACCTGTGGGAGGAAGTGTGA
GATGTGCTGCTGTGTTCCTGATGTTCTCTGTGCTTGCCCTGAGACAGATACTTGCCAGTGTCATGCATTGACACTTAGT
GTGGTTAATTAGTTGTCTGTCAGCTGGTACATGTTGTCTGGTGTGTGTGGTGAGATGTCTGTTCCTGTGCAACGTCAGC
TGTGTTCTTCATTGCAGATTGAGAAGGAGGAGCAGGCTGCTGCTGAGAAAGCAGTGACAAAGGAGGAGTTCCAGACCGA
ATGGACAGCCCCAGCTCCTGAATTCACTGCTCCTCCTCAGCCTGAGGTTGCTGATTGGTCTGAGGGAGTGCAGGTCCCA
TCTGTGCCAATCCAGCAGTTCCCCACAGGTCAGTTTTGTGGAAGGGTGTCTAGAGGAAGTGGGATCTGGAAAGCAGAAA
TAAGTCTTCACTGTGATTAGCTGCGGGGATGTGCATGGTGCTGGTGTACTGATTCCCTTGTCTTTAAGCAAGTCACAGA
TGTTGGTATTTTGTAGAGAAAATTGAGTAGTTACACTTCAGTTGCTTCATGCAAGTTTCTGCCAGCAATGTCTTTTAAA
CATTAAAATGATAGATTTTTAAGGCAGAGTGGATGTGAGTGTGTACCTTAGTTACTGCACTTGGAAGTGCGAAGTAAGT
TGATTTGGGGTCATGAGAAGAATACTAGTTTGTATACTTGCATATACATGTACAAGAATGGCAGCATGTACTACCTATT
GTTTTATGGATTAAAAGAGTCAAGGATGCAGTGAATTTTGTTGTGTTTAATTTCAGAGGACTGGAGTGCCCAGCCTGCC
ACTGAGGACTGGTCAGCAGCTCCCACTGCCCAAGCAACGGAGTGGGTTGGGACTACCACGGAGTGGTCTTAACTTCAGT
GCCGCTGTACTATCAAAAATAAAGACTGGTTTAATACCCATCCATCT
CitationChambers, D, Mason, I, A high throughput messenger RNA differential display screen identifies discrete domains of gene expression and novel patterning processes along the developing neural tube. BMC Dev Biol. 2006; 6: 9. Published online 2006 February 24.
CopyrightCopyright © 2006 Chambers and Mason; licensee BioMed Central Ltd.This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # X94368.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 6
Lateral Plate Mesoderm
Neural Plate/Tube
 
7-12
stage 7
stage 8
stage 8
stage 10
stage 10
stage 10
stage 11
Early Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
HH stage 8-
13-17
stage 17
stage 17
Central Nervous System
Limb Buds
 

Entry 2

GEISHA Id67LR.Masuda.2009Data SourcePublication
Complete cDNA Template Probeshow
GCGGGGAGGGCATATATTGACGTCACACGGCGAAGACTTTCCTTTTCGTTCGGCGCCCGCCGAGGCCTCCACACGGCGT
TGTCCGCGTTCCCTGTCGTCGCTTCCTAAGGGAAACCCCACGATGTCCGGAGGTCTCGATGTCCTGCAGATGAAGGAGG
AGGATGTCCTCAAGTTTCTTGCTGCCGGGACCCACCTGGGAGGCACCAACCTCGACTTCCAGATGGAGCAGTATATCTA
CAAGAGAAAGAGCGATGGTATTTACATCATCAATCTGAAGAGGACCTGGGAGAAGCTCCTTTTGGCAGCCCGTGCTATT
GTGGCTATTGAGAATCCAGCTGATGTGAGCGTCATTTCTTCCAGGAATACCGGACAGCGTGCTGTTCTGAAGTTTGCTG
CTGCCACTGGGGCTACTCCTATTGCTGGACGCTTCACCCCTGGTACCTTCACAAATCAGATCCAGGCGGCTTTCCGTGA
GCCACGACTCCTGGTTGTTACAGATCCCCGAGCTGATCATCAGCCACTGACCGAGGCTTCTTACGTCAACATCCCCACC
ATTGCGCTGTGCAACACCGACTCCCCGCTGCGCTATGTGGATATTGCTATCCCCTGCAACAACAAGGGAGCACATTCAG
TGGGCCTGATGTGGTGGATGCTGGCTCGGGAGGTCCTGCGCATGCGTGGCACCATCTCCCGTGAACATCCATGGGAAGT
CATGCCTGACTTGTACTTCTACAGGGATCCTGAGGAGATTGAGAAGGAGGAGCAGGCTGCTGCTGAGAAAGCAGTGACA
AAGGAGGAGTTCCAGACCGAATGGACAGCCCCAGCTCCTGAATTCACTGCTCCTCCTCAGCCTGAGGTTGCTGATTGGT
CTGAGGGAGTGCAGGTCCCATCTGTGCCAATCCAGCAGTTCCCCACAGAGGACTGGAGTGCCCAGCCTGCCACTGAGGA
CTGGTCAGCAGCTCCCACTGCCCAAGCAACGGAGTGGGTTGGGACTACCACGGAGTGGTCTTAACTTCAGTGCCGCTGT
ACTATCAAAAATAAAGACTGGTTTAATACCCATCCTACTTTGTA
CitationMasuda T, Sakuma C, Kobayashi K, Kikuchi K, Soda E, Shiga T, Kobayashi K, Yaginuma H. Laminin peptide YIGSR and its receptor regulate sensory axonal response to the chemoattractive guidance cue in the chick embryo. J Neurosci Res. 2009 Feb;87(2):353-9. doi: 10.1002/jnr.21868.
Copyright2008 Wiley-Liss, Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001007823.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-23
stage 23
stage 23
Ectoderm
Spinal Cord
Spinal Ganglia and Nerves
Trunk Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.34355

Mouse

Emage
EurexpressMGI:105381
MGI GXDMGI:105381

Frog

Xenbase972234

Fruit Fly

BDGPFBgn0003517

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-811
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