GEISHA - A Chicken Embryo Gene Expression Database
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USF1
upstream transcription factor 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolUSF1
Official Full Nameupstream transcription factor 1
CGNC ID19
also known asupstream stimulatory factor 1|major late transcription factor 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001007485
PolypeptideNP_001007486
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.22892
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human7391ENSG00000158773MIM:144250MIM:191523
Mouse22278ENSMUSG00000026641All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:99542
Xenopus100124791, 7345225918717
Zebrafish393266ENSDARG00000041689ZDB-GENE-040426-1072ZFIN:ZDB-GENE-040426-1072
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene425126
Ensembl Gene
KEGGgga:425126
GEISHA IdUSF1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCAGTGTCGCCATCGCCAG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTCCTCCACCTGCTGCCGTAAGcDNA Template Length766
Forward cDNA Template Probeshow
GCGGAGCCATCGCGAACTCGTTGTCATCGGGAGCTGGTCAGGCCCTGCAGCTCCTCGGAGAGGCGATGGTTGCTCTGCC
GCACCTCCTGGATGTAGTCGCAGGCTTTGGAGAGGATCCCCCCTTTGCTCTGCCCCGACTTGGTGTTCTCCATGGAGCA
GTCGGGGATAATCTTGGAGAGCTGCACCATCCAGTTGTTGATTTTGTCCCGGCGCCGGCGCTCCACTTCGTTGTGCTGT
GCCCGACGCTTCTCATCCCGGGTCGCCCGCGGCGCCTCTGCTTTCGGGGAGTAAGGGTGGGCACGGGGGGCGATGGAGC
GCTGCGTCCCACCCTGTAGGACCTCCTGGGGGGACATCATCACAAATAATTGCCCGGTGGGGGTGGGCTGCCCCAGCAG
CGCCTCTGAGTTCTGCTTGGTGACCACAGCGGTGGCCGTGGTCCCGGCGCCGGCAGATGTGCTGCTGTCGGCCACGGCC
GCGGTGGGGAAATAAGTGTAATGGGTCTTAGTGGCCGTGCCCTCCGTCTCCACCGCATCGTCGCTGGTGAAGGCCCCCT
GGATGACCGCCTGTGTCATGGACTGCACGGCGGGGTAGCCGCTGATGGCGGTGGTGCCTTCCGTCTGTCCGTCCAGCTG
TCCGTCCGCCACTTGGATCACCCTATACATCACCTGCATGCCCCCGTTCTCTGTGCCGAACACATATTTGATATTGGGG
TCGGGGAAGGTGGCGGCGGGACTTAATGGTGGGGATGTAAAACCTGGAAAGCCNCTACCGGCGGTTCCCCCCCCCCTCA
GCTGGTTGCCTGTGAAACCGCAAACCATTACAAAGGGTGTCTTTTAGGGCCCTTTCCCAGCGGGGCCGGGGCAAAAAAA
A
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Opaca
Area Pellucida
Blood Islands
Headfold
Hensen's Node
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 8
stage 9
stage 10
stage 12
Area Opaca
Blood Islands
Extraembryonic Mesoderm
Headfold
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 15
Lateral Plate Mesoderm
Paraxial Mesoderm
Tail
Widespread Expression
 
19-24
stage 21
stage 24
Eye
Forebrain
Hindbrain
Leg
Midbrain
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Wing
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.22892

Mouse

EmageMGI:99542
EurexpressMGI:99542
MGI GXDMGI:99542

Frog

Xenbase5918717

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-1072
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