GEISHA - A Chicken Embryo Gene Expression Database
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COL9A3
collagen type IX alpha 3 chain

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolCOL9A3
Official Full Namecollagen type IX alpha 3 chain
CGNC ID4190
also known ascollagen alpha-3(IX) chain|collagen, type IX, alpha 3|collagen-alpha-3 type IX
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_205305
PolypeptideNP_990636
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3459
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1299ENSG00000092758MIM:600969MIM:120270
Mouse12841ENSMUSG00000027570All phenotypic alleles (1):Targeted, knock-out(1) MGI:894686
Xenopus100145619, 446508997412
Zebrafish567110ENSDARG00000037845ZDB-GENE-030131-9799ZFIN:ZDB-GENE-030131-9799
Gene Ontology
Molecular Function
Biological Process
Cellular Componentcollagen
Links to other databases
Entrez Gene396242
Ensembl GeneENSGALG00000005628
KEGGgga:396242
GEISHA IdCOL9A3.Smith.2018Data SourcePublication
Complete cDNA Template Probeshow
AACTGGGTCCAAAAGGTGCTCAAGGACCCAATGGGACAGCTGGAGCTCCAGGGATCCCAGGACACCCAGGGCCCATGGG
CCATCAGGGGGAGCAGGGCGTTCCTGGCATCACAGGCAAACCGGGGCCTCCTGGCAAAGAGGCCAGCGAGCAACATATA
AGAGAACTCTGTGGGGAAATGATAAACGATCAAATTGCACAGTTAGCTGCTAATCTAAGAAAGCCCTTATCTCCTGGGA
TGACGGGGCGCCCTGGTCCTGCTGGTCCACCGGGTCCTCCAGGAGCGACGGGAAGCGTTGGACATCCTGGTGCTCGTGG
TCCACCCGGATACAGAGGGCCAACAGGAGAGCTTGGTGATCCTGGTCCCAGAGGTGACACAGGCGAAAAGGGAGATAAA
GGACCGGCTGGACAAGGAATTGATGGGCCTGATGGTGATCAAGGACCTCAAGGACTTCCTGGTGTACCTGGAATTAGTA
AAAATGGTCGGGATGGTGCTCAGGGTGAACCCGGTCTTCCAGGGGATCCCGGTACTCCTGGTGCTGTTGGGGCTCAGGG
AACTCCAGGCATATGTGACACATCAGCTTGCATGGG
CitationJonathan N Smith, Heather M Walker, Hannah Thompson, J Martin Collinson, Neil Vargesson, Lynda Erskine. Lens-regulated retinoic acid signalling controls expansion of the developing eye. Development. 2018 Oct 10;145(19):dev167171. DOI: 10.1242/dev.167171.
CopyrightCopyright © 2018. Published by The Company of Biologists Ltd.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Smith et al. 2018.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-23
stage 23
Retina
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3459

Mouse

Emage
EurexpressMGI:894686
MGI GXDMGI:894686

Frog

Xenbase997412

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-9799
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