GEISHA - A Chicken Embryo Gene Expression Database
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SLC6A4
solute carrier family 6 member 4

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolSLC6A4
Official Full Namesolute carrier family 6 member 4
CGNC ID3120
also known asSERT, sodium-dependent serotonin transporter|solute carrier family 6 (neurotransmitter transporter), member 4|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_213572
PolypeptideNP_998737
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.10763
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6532ENSG00000108576MIM:607834MIM:182138
Mouse15567ENSMUSG00000020838All phenotypic alleles (7):Targeted, knock-out(2) Targeted, other(4) Gene trapped(1) MGI:96285
Xenopus100496361981143
Zebrafish664719, 664770ENSDARG00000061165, ENSDARG00000057017ZDB-GENE-060314-1, ZDB-GENE-060314-2ZFIN:ZDB-GENE-060314-1, ZFIN:ZDB-GENE-060314-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene404747
Ensembl GeneENSGALG00000004246
KEGGgga:404747
GEISHA IdSLC6A4.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-GTTTGAAGAATACGCCACAG-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGCATCCCATTATCTCAGCTGG-3’cDNA Template Length508
Complete cDNA Template Probeshow
GTTTGAAGAATACGCCACAGGCCCAGCTGTGCTAACAGTGGTGTTCCTGGAAGCGGTGGCAGTGGCTTGGTTCTACGGC
ATCACCCAGTTTTGCAACGATGTGAAAGAAATGCTGGGCTTCGCTCCAGGCTGGTACTGGCGAGTGTGCTGGGTGGCAA
TCAGTCCCATCTTCCTGCTGTTTGTCACTTGCAGCTTTCTGTCCAACCCCCCCGAGCTCCGGCTTTTTGATTACAACTA
TCCCTACTGGACCACAGTAGTGGGCTACTGCATAGGAACCTCTTCCATCATCTGTATCCCAATCTACATGGCTTATCGG
TTGATCATCACTCCTGGAACACTTAAGGAGCGTATTCTGAAAAGCATTACTCCAGAAACAGCCACAGAAATTCCTTTTG
GAGACATCCGCATGAATGCCGTGTAAGCTAACCTGGTTTCTGGGGGGAGAGGGGAAGCACAGAGTCAAACTTTCCACCC
AAGGAATTATGTTTCCAGCTGAGATAATGGGATG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 18
Head Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Unlabeled
 
19-24
stage 19
stage 23
Head Mesenchyme
Myotome
Pharyngeal Arches and Clefts
Unlabeled
 
25-26
stage 25
stage 26
Unlabeled
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.10763

Mouse

EmageMGI:96285
EurexpressMGI:96285
MGI GXDMGI:96285

Frog

Xenbase981143

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-060314-1, ZDB-GENE-060314-2
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