GEISHA - A Chicken Embryo Gene Expression Database
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CASQ2
calsequestrin 2

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolCASQ2
Official Full Namecalsequestrin 2
CGNC ID49209
also known asCASQ1, calsequestrin-2, calsequestrin-2|aspartactin|calsequestrin 2 (cardiac muscle)|calsequestrin homologue|calsequestrin, skeletal muscle isoform|calsequestrin-1|laminin-binding protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204526
PolypeptideNP_989857
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.42165
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human845ENSG00000118729MIM:611938MIM:114251
Mouse12373ENSMUSG00000027861All phenotypic alleles (6):Targeted, knock-out(2) Targeted, other(4) MGI:1309469
Xenopus394741, 3984246074555
Zebrafish114410ENSDARG00000008982ZDB-GENE-010724-12ZFIN:ZDB-GENE-010724-12
Gene Ontology
Molecular Functioncalcium ion binding
Biological Process
Cellular Componentsarcoplasmic reticulum lumen
Links to other databases
Entrez Gene395198
Ensembl GeneENSGALG00000015018
KEGGgga:395198
GEISHA IdCASQ2Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGAAGAAGATGACCCAGATGGC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGCAGGTTCCCTACAGATTCCTATTGcDNA Template Length675
Complete cDNA Template Probeshow
TGAAGAAGATGACCCAGATGGCTTTGAGTTCCTGGAAATCCTGAAGCAGGTTGCCAGGGACAACACTGATAATCCTGAC
CTGAGCATTGTGTGGATTGACCCTGACGACTTTCCTCTGCTCATCACTTACTGGGAGAAGACCTTCAAGATTGACCTGT
TCAGGCCGCAGATTGGGATTGTGAATGTCACAGACGCTGACAGTGTCTGGATGGAGATCAGAGATGATGATGACCTGCC
CACAGCCGAGGAGCTGGAGGACTGGATAGAGGATGTGCTTTCTGGGAAGATAAATACTGAAGACGATGACGATGATGAC
GATGATGATGACGACGACGATGATGATGACGATGATGATGATGATGACGACGATGATGACGACGATGACGATGATGATG
ACTAACTGTGACTCTGTACAGTTTGACTTGTGGAGGCCGAGAGGCCTCCCCCTGTGGCAGGTCCCTTCATCAGAGAGCC
TGTGTTTGAGCGTCAGCAAGCACCGCCTGCTCCTCCTTTCCCCCTTGCCCCGCTCCCCCTGCCCCTGCTGGGACCCCCG
GCCTGATTCTCAGAGGTGCTGAGCCACCAGGACTGCCACCTCGGCGGGTGCGACCGGCATGCCAGCACCGCTGTAAATC
ATGCCTCTGTAGAAAGGACAATAGGAATCTGTAGGGAACCTGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
Unlabeled
 
13-18
stage 17
stage 18
stage 18
stage 18
Head Mesenchyme
Myotome
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Ventricles
 
19-24
stage 22
stage 24
Face Mesenchyme
Head Mesenchyme
Heart
Lung
Myotome
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Foregut
Head Mesenchyme
Lung
Myotome
Notochord
Pharyngeal Arches and Clefts
Sinus Venosus
Ventricles
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.42165

Mouse

Emage
EurexpressMGI:1309469
MGI GXDMGI:1309469

Frog

Xenbase6074555

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-010724-12
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