GEISHA - A Chicken Embryo Gene Expression Database
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SMARCD3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

Gene
Official SymbolSMARCD3
Official Full NameSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
CGNC ID9868
also known asSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_427895
PolypeptideXP_427895
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.26701
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32268FBgn0025463
Human6604ENSG00000082014MIM:601737
Mouse66993ENSMUSG00000028949MGI:1914243
Xenopus100495941, 735086494883
Zebrafish562140, 564652ENSDARG00000019969, ENSDARG00000038786ZDB-GENE-080509-2, ZDB-GENE-070912-491ZFIN:ZDB-GENE-080509-2, ZFIN:ZDB-GENE-070912-491
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene430336
Ensembl Gene
KEGGgga:430336

Entry 1

GEISHA IdChEST574g14Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGGAAGCTGCTGCTCTGTGCTGTCTGCTTGGAAGTGAGACCAGGTCATGTCCAGTGACCAGTCCAATCTGTCTGTGGTA
TGGGGCTGTCAGCAGTGCCCTTCTTGGAGAATGACTTCAAAGTATGACGTGCCTGGAGGAGCCGTGCACCTTCTGAAAA
GAACCAGTTTCTTGGTACTGCTTCAGTAGCAATCAACACCCAGCTGTTCACCATAGGGACACTGCCATGAGGAGCCAGA
TCTTTCCAAGCAGGATTCTTGCCCTTCGGCCCTAGGGAAGGAATTCCCAGCCTGGCCCCGCTCCTTGGGCATCGTGAGG
AGCTGGATCCAAATGCATCTTCCGCCTGCTCTCTTAGAGCTGCTCCTGCTTCAGGTCAATTAGAATGTGACTGTAGGTG
TTTGCCATCTGCCTAGCCTGGCACAGCGACCTGGGATGCCATCAGGAGCTCGAATGCCCCACCAGGGGGCTCCCATGGG
TCCCCCAGGCCCTCCATATGTTGGAAGCCCCTCGGTGAGACCTGGGATGCCCCAGACTGTGATGGAAACAACAAGAAAA
CGCACTGCACCACAGCAGGTCCAACAACAGCAGGTGCAGCAGCAAGTGCAGCAGCAGCAGCAAGCTACTCAGAACCGAA
CTAGGAGTGCCAAGAGGAGGAAGATGGCTGACAAAATTCTCCCTCAGAGGATCCGGGAGTTGGTTCCTGAGTCCCAGGC
CTACATGGATCTGCTGGCTTTTGAACGCAAACTAAACCAGACCATTATGCGGAAGCGCGTGGATATTCAGGAAGCACTG
AAAAGGCCAATGA
CommentsNo specific expression detected stages 5-19.
no images

Entry 2

GEISHA IdSMARCD3.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ATTAAAGGGACAGATGAGTAGTTTTCTTCTCTCAACAGCTAACCAACAGGAGATTACAGCATTGGACAACAAGATTCAT
GAGACAATCGAATCCATAAATCAGCTAAAAATACAACGTGATTTCATGCTGAGTTTCTCCAAAGATCCCAAAGGATACA
TCCAAGACCTTCTCCGGTCCCAAAGTAGGGATCTTAAGGTGATGACTGATGTAGTTGGAAATCCAGAAGAAGAACGCCG
AGCTGAATTTTACCATGAGCCATGGTCTCAAGAGGCTGTGAGCAGATATTTCTACTGCAAGATTCAGCAGCGCCGACAG
GAGCTGGAACAGTCTCTGGGAGTGCGCAACACATAAGTATTGCTCAGAACATCACATTGGCATCATGACTACAGAACAA
GTGGACTCCCCAGCGTTACTTAGCTCACTGTTACACATGGACCTGCTTCCTGACTGGATGGAAATGTACCATCAACAAA
ACCAGTCAGAACACCAGCTTTAGAGTGACCCTTGAAAACACCGCCCATTGGAGGTGTCTCAAATCATTCCAGGCCATAG
ATAGCAGAAGTTTGCCGTGCTTTATACAGGTGTCAGTGCAAAAGAAGATTACAGATTAATTCATCAACTTGCATCATTG
AGTTCTAGTGGAAAGTTCAGATACTACGCAGCAAATCCTTATGGATTACGCATAGAATCATGGATGGTATCGATGGGGG
AGGGTAGAGCTGAGTGTTATACAAAGACTACAGATTAGAGAACTTCAAGGTACTTCTCATCCCGTCAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 11
stage 12
stage 12
Atria
Head Mesenchyme
Heart Tube
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Outflow Tract
Sinus Venosus
Somites
Ventricles
Widespread Expression
12b, ventral
ventral
ventral
13
stage 13
Dermomyotome
Ear/Otic Placode
Eye
Head Mesenchyme
Heart
Hindbrain
Intermediate Mesoderm
Myotome
Neural Plate/Tube
Notochord
Sclerotome
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.26701

Mouse

EmageMGI:1914243
EurexpressMGI:1914243
MGI GXDMGI:1914243

Frog

Xenbase494883

Fruit Fly

BDGPFBgn0025463

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-080509-2, ZDB-GENE-070912-491
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