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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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NCAM1
neural cell adhesion molecule 1

Gene

Official Symbol	NCAM1
Official Full Name	neural cell adhesion molecule 1
CGNC ID	5929
also known as	N-CAM, N-CAM-1, NACM, NCAM-1, neural cell adhesion molecule 1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001128828
Polypeptide	NP_001122300
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.35109

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	255239	ENSG00000170209	MIM:608774	MIM:608774
Mouse	244859	ENSMUSG00000032257		MGI:3045301
Xenopus	100493231			961576
Zebrafish	100170831	ENSDARG00000056921	ZDB-GENE-071015-4	ZFIN:ZDB-GENE-071015-4

Gene Ontology

Molecular Function
Biological Process	cell adhesion
Cellular Component	integral component of membrane, plasma membrane

Links to other databases

Entrez Gene	428253
Ensembl Gene	ENSGALG00000007839
KEGG	gga:428253

Entry 1

GEISHA Id	NCAM.Tao.2002	Data Source	Publication
Complete cDNA Template Probe	show GTCACGGCGGCGGCGCCGGGAGGCGGCCGGGGCGCAGCGGGCGGAGCGGGGACACGCGCGGAGCGGAGCGGAGCGGCGC GAAGGGGACGCGGGGCAAAAACGGGAAGATCCATCCGGAGGGCCGCGTGGTGCTCCGCCCGCACGGAACGGCTATTTCG GAGCGGCCCCTCTCGCCCCCCCGCCGGCTGCGATGCTGCCCGCCGCCGCGCTGCCCTGGACGTTGTTTTTTCTCGGAGC CGCAGCCTCTCTACAAGTGGATATTGTTCCAAGTCAGGGAGAGATCAGCGTTGGAGAATCCAAGTTCTTCTTATGTCAA GTGGCAGGGGAAGCCAAATACAAAGACATTTCCTGGTTTTCCCCTAACGGTGAGAAGCTGACGCCCAACCAACAGCGCA TCTCAGTGGTGCGAAATGATGACTTCTCCTCCACCCTCACCATCTACAACGCCAACATTGATGATGCTGGCATCTATAA ATGTGTTGTCAGCAGCGTGGAGGAGGGAGACTCTGAAGCCACCGTCAATGTGAAAATTTTCCAAAAGCTCATGTTCAAG AATGCCCCCACTCCTCAGGAATTCAAGGAAGGGGATGATGCTGTGATTGTGTGTGATGTGGTCAGCTCGCTGCCTCCTA CCATCATCTGGAAACACAAAGGCAGGGATGTCATCCTAAAAAAAGATGTTCGGTTTATAGTGCTGTCCAACAACTACCT GCAGATCCGGGGAATCAAGAAAACAGATGAAGGGACGTACCGCTGTGAGGGCCGCATCCTGGCTCGTGGGGAGATCAAC TTCAAAGATATTCAGGTCATTGTAAATGTACCTCCTTCTGTGCGTGCCAGGCAGAGCACTATGAACGCCACTGCCAACC TCAGCCAGTCTGTCACCTTAGCATGTGATGCTGATGGCTTTCCTGAGCCAACCATGACGTGGACAAAGGATGGAGAGCC AATAGAGCAGGAGGATAACGAAGAGAAATACAGTTTTAACTATGATGGGTCCGAGCTGATCATCAAGAAGGTGGATAAG AGTGACGAAGCAGAGTACATCTGCATCGCTGAGAACAAGGCTGGCGAGCAGGATGCCACCATTCATCTCAAAGTCTTTG CAAAACCCAAAATCACATATGTGGAGAATAAAACAGCTATGGAGCTGGAGGATCAGATCACACTGACCTGTGAGGCCTC TGGGGACCCAATCCCTTCCATCACGTGGAAAACTTCCACCCGGAACATCAGCAATGAAGAGAAGACCCTGGATGGGCGC ATCGTGGTGCGCAGCCACGCGCGGGTATCGTCCCTGACTCTCAAAGAAATCCAGTACACAGACGCCGGAGAGTACGTGT GCACGGCCAGCAACACCATCGGGCAGGACTCACAGGCCATGTACCTCGAAGTGCAGTATGCTCCCAAGCTTCAGGGCCC TGTGGCTGTCTATACCTGGGAAGGGAATCAAGTGAACATCACCTGTGAGGTATTTGCTTATCCCAGTGCTGTCATCTCC TGGTTCCGAGATGGACAGCTGCTTCCCAGCTCAAACTACAGCAACATCAAGATCTACAACACTCCATCAGCAAGCTACC TGGAGGTGACACCAGACTCTGAAAATGACTTTGGCAACTACAACTGCACTGCTGTGAACCGCATTGGCCAGGAATCCTC AGAGTTCATTCTTGTGCAGGCGGATACTCCGTCCTCTCCTTCTATTGACAGAGTGGAGCCCTACTCTAGTACTGCCCGT GTGGAGTTCGATGAGCCTGAAGCTACTGGTGGGGTGCCCATCCTCAAATACAAAGCAGAGTGGAGAGCACTGGGTGAAG GAGAATGGCACTCAAGATTGTATGATGCAAAAGAGGCAAATGTGGAGGGCACGATCACTATCAGTGGCCTGAAACCTGA GACAACCTACTCAGTGAGACTGTCTGCAGTCAATGGCAAGGGTGTGGGTGAGATTAGCCTGCCATCCGACTTCAAGACA CAGCCAGTTCGGGAACCCAGTGCACCCAAACTGGAAGGGCAGATGGGAGAAGACGGAAACTCCATCAAAGTGAACGTTA TCAAGCAGGATGATGGTGGCTCCCCAATCAGGCATTACCTGATCAAATACAAAGCTAAACATTCCTCAGAATGGAAACC AGAGATCAGACTGCCTTCTGGCAGTGACCACGTCATGCTCAAGTCTCTGGACTGGAATGCAGAGTATGAGGTTTATGTG ATAGCTGAAAACCAGCAGGGGAAGTCCAAACCCGCTCACTACGCTTTCCGGACATCTGCTCAGCCTACTGTCATCCCAG CCAGCACTAGCCCTACGTCAGGCCTGGGGACTGCTGCCATCGTAGGCATTCTCATTGTTATCTTTGTGCTGCTCCTGGT GGCTGTGGACGTCACCTGCTACTTCCTGAACAAATGTGGCCTGCTCATGTGCATTGCTGTCAACTTATGTGGCAAGTCT GGACCAGGAGCCAAGGGCAAAGACATGGAGGAGGGCAAAGCTGCCTTCTCGAAAGATGAGTCCAAGGAGCCTATTGTGG AAGTGCGGACTGAAGAGGAGCGGACCCCCAACCATGATGGGGGAAAACACACAGAGCCCAACGAGACCACCCCACTAAC AGAACCAGAGCACACCGCCGATACTGCAGCTACTGTTGAGGACATGCTGCCTTCTGTAACTACGGGCACCACTAACTCT GACACTATCACTGAAACTTTTGCCACTGCTCAGAACAGCCCCACGAGCGAGACCACCACCCTGACCTCCAGTATTGCCC CGCCAGCCACGGCCATTCCTGACTCAAACGCCATGTCGCCTGGCCAGGCTACTCCAGCCAAAGCGGGAGCCTCCCCTGT CTCTCCACCACCACCCTCCTCTACGCCCAAAGTGGCCCCCCTTGTTGATCTCAGCGATACCCCAAGCTCTGCTCCAGCT ACTAATAATTTGTCTTCAAGTGTCCTGTCCAACCAAGGTGCAGTGCTGAGCCCCAGCACTGTTGCTAACATGGCCGAGA CCTCCAAAGCAGCAGCTGGTAACAAGTCAGCTGCCCCAACCCCTGCAAACCTCACTAGTCCTCCAGCTCCATCAGAGCC CAAGCAGGAGGTCTCAAGCACCAAGAGCCCCGAGAAAGAAGCTGCGCAGCCCAGTACAGTGAAGAGCCCAACAGAGACA GCCAAGAATCCAAGCAATCCGAAGAGTGAGGCTGCTTCAGGCGGCACCACAAACCCCTCCCAGAATGAGGACTTTAAAA TGGACGAAGGGACCTTCAAGACACCAGACATTGATCTTGCAAAGGATGTTTTTGCAGCTCTTGGCACTACTACTCCTGC CAGTGTGGCTAGTGGGCAAGCTCGTGAGCTTGCTTCTTCCACTGCAGACAGCTCTGTACCTGCTGCACCTGCAAAGACC GAGAAAACCCCAGTAGAAGACAAATCTGAAGTGCAAGCAACGGAAACTAAGACACCTCCAGCAGAAGTGAAGACGGTCC CCAACGAAGCCACACAAACAAATGAGAATGAGAGCAAAGCATGATCAGCGACAGATGAAAAACCATGGCAGAACGACTT CACCCAAGCATTTACAACACGAAACACAACACACATCTCATTCCTCTAGTGTCTGTTGCCTTTTTTTTAAAAAACAAAC AAACAAACAAAACAGAAAATGCATAAATGGGGAGGGGGGGGTTCTCTCTTTTTTTCTTTTTCTTTTTCTTAAGATTTTT AGGAAGGTTCTATTTGTTGTGTACTTGCTTTTAAAAAGTAACACGTTTTAAAAACAGGGTTAAACCCATCACCAGATCG GGGGCTCAGCTGTCCCCTGGTATGTTCAAACAAGCAGAATTGCAGAATACCACTTAGAGCATCGCTGAGGAGCTCAGAG TCACCCAGTCGTAGACGAAAGGAAAAAAAGAGAAAAGAAAAAAGAAGACCCTGTTCTTTCCTTGGTTAGAATAGTAGAT TTAACCACTGTACTGCTTGCCTGCTTGGTACAGGCGGTACTTAGTGAACAAAGTCCACAATTTATTTTTATACTTTTCA GTCGAGTTTGAAATATGTAAAGCCTCATAAATAAGTTATAATTTCTGTTCACCTTGTGTTCAGTATGCAAAGTGTCGTG AGCATTTTGTGGCTGAATTCTGTTCTCCTCGTTAGACATTGATTTTGGGGTTTATTATTTTTGTTAGGAAGAATGCCAA AATTGCAGCTTCGGGGGATGTATTTCAATTTGCAGTATTCAGACTCTACATTTCTTTAAATTTTATGTTAATTTTTGCC AACTTTTGTTCTCTCCAGTGTTTACAATTGACATTTTTTTAACTTTTGTTGTGTTTAAATGTATTTGTAAAATAGCTGC CTTTTTTTTAAAGTAAATCCAGACTCTAGCTACTAGGTTAGCAGCATGCTTGCTTTGCAAAGGGAGACATTTTGAAATA TCGATGTTTACAGTAGTTTCCCCCTTTATCTTTTTTAATTATTATTATTATTATAATTATTATTATTATTTCTTACTGG AGTAAGAAAAAAGAGTAATGCTGGTCTTTGGTTTGTTTTAGGGGGGTGGGGCGTGGGGAATATTCCAACCACTTGTCAC CAATCGAGGTCTGTATCCAGCAATCCACATAAACACACTTCACTTTGAACGAGAGAGTTGCTGGAGAGAGTTTCCTTAT ATACTTAAATTTATTAAGAGTGTAAGTCCCTTGCTGGACCTGGGCCTGAATGCATAAGAAAAATATCATCTCTGCTTTT TTAGGACATTCTTCTCTTTCCTTCATGGAACCCTCCCAGAGCTTTGAGAAGCAGAAGAGGGATTGTACAGTTAGGGCTG GGCTGGTCTTGTCTCCACTGTTTGACTACATCCATTTCTCTGTAGAATGTTGATAACTGCCATTTCCTTTGACCCCAGA AACTGATTTAAAAGCAATGCCTTTCCGCACTTAAATAAAGTTTCCTTTTGAGGAGTGGTAACACTAAAAACAGAACATC CTGCTCTCATGTGGGTGATGTTCATGAGCAGAGGGTGCTTGGCAGCATGCAGGTGTCCTTACTCATTGCAGGGAAGTTG GACTAGATGACCCTTAAGGGTCCCTTCCAACCCAAACGATTCTATGACTCTCCATAAGACCCCTTCTGCAAAGTCAGCT CCAGCACATTGTGTCTGATAAGTCATCCGTGTATGCTTTGCATCATCCAGGCCATGTATCCATGGCTGAGTGCTTGGGC ATCAGTGCCAACGCTCCCATTGATGTCCCTGCTCTTCTCATCATGCTTTTAGCAGTCAGAGAAAGGGGCTGATGTCACA CATGCGTTGTTGTGGTCGTCACTGGGAGTCATGGAGTAACACTGAGACTTCAGGGTGGGAAGAAGAGAAGGTTGAGCAG CAGGAAGGCAGAGGAAGACCAGCCCATTGTATAGAGGTGCTCCTTCTCTGGGGGTTTTGCTTTGTTTGTTTTTCTTTTA TTTTCCATTCTTTTTTTTTTTTTTTTTCTACTTTAGATCTGCAAGCTTGTGCACTGTGGGTGCGTGACTTTTAGTGTGA AACGTGTTTTTTGTCATAGTATTGAAATAATTGAAAAAAAAAAAAAGCTTCAACATAGTTTGGATGTGGAAGGTGTAGC GGATAGGTCAGATTTAAAATATATATATTCAGGAAAAAAAAAAAGAGAACAACTTCTAGGAGGAACACAAGCCTTTAAA TGACAAACCCGAGCTGATGATGGCATCATTGCATCGCGCCATGGGGACGAGCAGAAGGGTGATGGGGTTGGGGAGATCA TGCTTGGCTCGGGTGAACTGAGCCACTATCGTTGGTGTGTCCTTCTGAGTATGCAGTCTTTTACAGTGGCATCACATGA TTTCAAACAGTGTAAAACAGTGGTTTTGTCATTTGCTAAGTGTGGGGTTTTTGCATTTTTTCCTCAGCTCCTGGGGATG GAAGTGGAGGATGGCTGGCTATGCAGGCACAGACACTCAGGCAATACCATCCCAGGCAGAACAGCAGGGCAGGACAGGT TCCCACTTGAGAGCCTTGTGTCAGATTCAGCCCATGCTTGACCCATGACAGCAGCGTTGATGTAAGTAAGGCGAAATTT GGTCCGTGGTCCCTAGGACCTTATATATCATGCCTCCCCGAGCAGCAACAGGAGCAAACGCTGCTCAGCGCAGTGACCC GGAGTATGTCCAGTGCCACTGATCAGCACCCATTGGGTGGCACTGTGGTGGCTGTCACCCAGACTGGTGTTTCTGCCAT GTAAGGCCACCAGCCCAGGGCCCCATCCAGCACCCGGCCGTGTCACAGTGCCCGGTACCTGCTGGGTTGTGTCCTGTGG ATGGAGCCTCTGTGCTGCTCCCTTAGTGCCCCTGTGACCTCCCCATCCCCAGAACCCTTAGATTAATTTTGGAGAGTGT TTTTATACTTGCCCTTAATGGAGAATAATTTGTTTTAACTTATAAATATCCCATTCCCAAGGTAGCTTAGGCTTCATTG CTTTTATTTAAACCTTTGAAGAGGGACCAACCTGATGCCGTTTGCGCTGTATATGTTTATATATGTATCCATGCCATAC ATATATATATCTATATGGCAACTCAGACTGATCAGCTTCTAGTTGTGGAGTGACATTTCATGCTGCACCATACGTAACG ATGATGAGGTAATAGTGCATCCAGTTGTTCAGCTTTTAGAGTGGAATTTTATTTTCACACTTTTCTATGGAGCCTTCAA ACCCCAGGTTTTCACACTAGGCTGTTTTGATAGTTGTTCTCAGACCTCCACTGACATCCTTACCCAGCATTCCCTACTT TTGGGGGCCTTCTATCTTGTTAAAAAAACAAAAAAACAAAAAATCTTTTTACCGAGTGAAACATCAGTTCCACCTTTAT TCCCATTCTCACTGGTGTAAATACTGATACTAACTGAGGATTTTGACTTTGCATTCTGTCAGAATACTGTGTTCAAATA AAAATTACAAAAAAAAAATACCAACAAAAA
Citation	Tao H, Yoshimoto Y, Yoshioka H, Nohno T, Noji S, Ohuchi H. FGF10 is a mesenchymally derived stimulator for epidermal development in the chick embryonic skin. Mech Dev. 2002 Aug;116(1-2):39-49.
Copyright	Copyright © 2012 Elsevier B.V. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001128828.2)

Stage

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Location (click to highlight)

Comments (click to highlight)

31-44

stage 44

Feathers/Scutae

Scales
feather, dermal papilla
feather, dermal papilla, br is barbed ridge plates

Entry 2

GEISHA Id	NCAM.Olivera-Martinez.2014	Data Source	Publication
Complete cDNA Template Probe	show CCCCTGCAAACCTCACTAGTCCTCCAGCTCCATCAGAGCCCAAGCAGGAGGTCTCAAGCACCAAGAGCCCCGAGAAAGA AGCTGCGCAGCCCAGTACAGTGAAGAGCCCAACAGAGACAGCCAGGAGTCCAAGCAATCCGAAGAGTGAGGCTGCTTCA GGCGGCACCACAAACCCCTCCCAGAATGAGGACTTTAAAATGGACGAAGGGACCTTCAAGACACCAGACATTGATCTTG CAAAGGATGTTTTTGCAGCTCTTGGCACTACTACTCCTGCCAGTGTGGCTAGTGGGCAAGCTCGTGAGCTTGCTTCTTC CACTGCAGACAGCTCTGTACCTGCTGCACCTGCAAAGACCGAGAAAACCCCAGTAGAAGACAAATCTGAAGTGCAAGCA ACGGAAACTAAGACACCTCCAGCAGAAGTGAAGACGGTCCCCAACGAAGCCACACAAACAAATGAGAATGAGAGCAAAG CATGATCAGCGACAGATGAAAAACCATGGCAGAACGACTTCACCCA
Citation	Isabel Olivera-Martinez, Nick Schurch, Roman A Li, Junfang Song, Pamela A Halley, Raman M Das, Dave W Burt, Geoffrey J Barton, Kate G Storey. Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo. Development 2014 Aug;141(16):3266-76. Epub 2014 Jul 25. DOI: 10.1242/dev.112623.
Copyright	Copyright © 2014. Published by The Company of Biologists Ltd.
Comments	Authors indicated the probe was made from cDNA clone ChEST463a15. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number BU341853.1).