GEISHA - A Chicken Embryo Gene Expression Database
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ARHGEF4
Rho guanine nucleotide exchange factor 4

Gene
Official SymbolARHGEF4
Official Full NameRho guanine nucleotide exchange factor 4
CGNC ID1564
also known asrho guanine nucleotide exchange factor 4|LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 4|Rho guanine nucleotide exchange factor (GEF) 4
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_422582
PolypeptideXP_422582
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.51279
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human50649ENSG00000136002MIM:605216
Mouse226970ENSMUSG00000037509All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:2442507
Xenopus100487089960462
Zebrafish559017ENSDARG00000012914ZDB-GENE-070912-575ZFIN:ZDB-GENE-070912-575
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene424761
Ensembl GeneENSGALG00000002193
KEGGgga:424761
GEISHA IdARHGEF4.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGGACATAGAAGATGGGAAGGACAAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTTGAGGTGAAAGGTGGGGAACcDNA Template Length914
Forward cDNA Template Probeshow
AATACATCTGACAGAACAATTACAGGACTTACAAAATACACAGGTTCTGGTTTATACCATAAATAAACACATTACAAAC
AATGAGCATTTTCATTGGCCAGGAAATATGGCAGAATGATAGAAGAGAATCTAAGGAATTGAGTACAGTATTAATTTAG
GCACATTTTTCTCTAACTTATGTAACAAACCCACTAGAGCGATTCGTGAACGTTACTCATGCTGCAGGTTGGTTGGCAC
CGTTTAACAAACTATATTGTTCAGCAGTGTTGTTGAGTTAAAGGGAAGAGAAGGGTCACAGTGCAATACTCACTGTTGT
CTCGTCTGAGTGCCAGCAGAGGCTGGCTGAGTTAGTTAGAAGGGTGGAGGAGGATCGTGTCCTTGAGGTGAAAGGTGGG
GAACGGGGGTGGGCAGAGAACGGAAGGGTTTGCTCCTCCCTGCAAAACATACAATGTCAGCAACACTGAGCTGTTGTTC
TGAGCGCGTCAGTGGGGGACAGAGCTGGTAGGCTGANCAGCTGCCANACAGCANCGGTGTTCGCANCANAATGGAATGA
TTCNNAGTACANCTGACAGGCAAAACCTTTTCANATGAANCANATCANGCTCCNTTCTGATCTCTTCCTGGAAGTTTGT
CTCTTGGGTGCTG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Early Mesoderm
Lateral Plate Mesoderm
Notochord
Low level expression.
7-12
stage 7
stage 9
stage 9
stage 10
stage 10
stage 12
Anterior Intestinal Portal
Foregut
Heart Tube
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
faint expression
13-18
stage 13
stage 16
stage 18
Anterior/Second Heart Field
Extraembryonic
Eye
Forebrain
Heart
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
 
19-24
stage 22
stage 22
stage 22
Anterior/Second Heart Field
Ear/Otic Placode
Endoderm
Eye
Gut
Heart
Mesonephros
Notochord
Somites
Splanchnic Mesoderm
 
25-26
stage 26
stage 26
stage 26
stage 26
Anterior/Second Heart Field
Eye
Forebrain
Heart
Hindbrain
Mesonephros
Midbrain
Notochord
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.51279

Mouse

Emage
EurexpressMGI:2442507
MGI GXDMGI:2442507

Frog

Xenbase960462

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070912-575
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