GEISHA - A Chicken Embryo Gene Expression Database
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BSX
brain specific homeobox

Gene
Official SymbolBSX
Official Full Namebrain specific homeobox
CGNC ID4913
also known asbrain-specific homeobox protein homolog|brain-specific homeodomain protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204512
PolypeptideNP_989843
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human390259ENSG00000188909MIM:611074
Mouse244813ENSMUSG00000054360All phenotypic alleles (6):Targeted, knock-out(1) Targeted, other(5) MGI:2669849
Xenopus100124316995769
Zebrafish573364ENSDARG00000068976ZDB-GENE-040628-4ZFIN:ZDB-GENE-040628-4
Gene Ontology
Molecular Functionsequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processbrain development, eating behavior, locomotory behavior, mammary gland involution, more...positive regulation of transcription from RNA polymerase II promoter, transcription, DNA-templated
Cellular Componentcytoplasm, nucleus, transcription factor complex
Links to other databases
Entrez Gene395183
Ensembl GeneENSGALG00000006515
KEGGgga:395183
GEISHA IdBSX.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerACCACCACCACCACCCCTAC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGATTTCCAAGCAAAGTTCAGGCcDNA Template Length639
Forward cDNA Template Probeshow
ATTAGGAATATAGCTGGGGGAGCTGGGATGCAGCCAAGGGGCGAAAGGAGCCCGGGNGGTTTTGTTCCCCTCCGTACCG
ACACCAAACCTCGGCACCCCGGCAGCACGCGGGGCTGGGGGAGAGATGCGGGGCTGCGCAAAGCCGCCCTGAGAGCTCC
TAAAGGCGATGTGGGGCGGCGAGGATATCCCCCTCCTCCAGGATGTCCACCTCGTCCTCGGGGTCCTGCAGCAAGAAGG
GGCCGGGGGGGCCCTTTCGGGGCTCGGCTGCGGCCGGCTCGGGGAGCTCGGGCTCGGGGGAGCTCTGCTCGCGGTTCTC
TTCGTGTATGGGGTCGTCCTGGCTTTTCCGCAGCTGTTTTTTGTGTTTCATCCGCCGGTTCTGGAACCAGGTTTTCACC
TGCGTCTCGGAGAGGCTGAGCGCCGTGGCCAACTCCACCCGCTCTGGCGTGGAGAGATAGCGCTGGATCTCGAAGCGCT
TCTCCAGACCGGAGAGCTGCGAGTCGGAGAAGACGGTGCGGGCCTTGCGGCGGCGGCAGTGCTTCCCGGGCAGCTCGGC
GTGAGCGTGGTGCGGGAACAGCGCCGGCACCGGCACTCCCGAGGTGGTGAGGAAGTAGGGGTGGTGGGTAGGTGGTACN
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
Primitive Streak
 
4-6
stage 4
stage 6
Area Pellucida
Extraembryonic Mesoderm
Neural Plate/Tube
Primitive Streak
Twins : stages 5 & 6.
7-12
stage 8
stage 9
stage 11
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Heart Tube
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Stage 7+ to 8-.
13-18
stage 16
stage 17
Widespread Expression
 
19-24
stage 22
stage 23
Pineal Gland
Somites
Widespread Expression
 
25
stage 25
stage 25
Leg Ectoderm
Pharyngeal Arches and Clefts
Pineal Gland
Somites
Surface Ectoderm
Widespread Expression
Wing Ectoderm
 

Mouse

EmageMGI:2669849
MGI GXDMGI:2669849

Frog

Xenbase995769

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040628-4
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