GEISHA - A Chicken Embryo Gene Expression Database
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FDFT1
farnesyl-diphosphate farnesyltransferase 1

Gene
Official SymbolFDFT1
Official Full Namefarnesyl-diphosphate farnesyltransferase 1
CGNC ID12485
also known assqualene synthase
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001039294
PolypeptideNP_001034383
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2222ENSG00000079459MIM:184420
Mouse14137ENSMUSG00000021273All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:102706
Xenopus100216201964782
Zebrafish571911ENSDARG00000060260ZDB-GENE-081104-242ZFIN:ZDB-GENE-081104-242
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422038
Ensembl GeneENSGALG00000016665
KEGGgga:422038
GEISHA IdFDFT1.Olivera-Martinez.2014Data SourcePublication
Complete cDNA Template Probeshow
CGGTTTGAGGTGGCGGGCGGAGGGGGGGGAGCGCGTCGGGAGCGCGCGGAGCGAGAGCGCGTGTGGCGGCGGTGCGGCC
GTCATGGAGCTGCTGAGGAAATGGCTGGGGCACCCCGAGGACATCTACCACCTGCTGCGCTTCAAGATGGGCGGCTACC
GGGCCGTCATGCCGCGCATGGACCCGGACTCGCTGGGACTCGGGCTCCGCACCTGTTACCGCTACCTCAACCAGACCAG
CCGTAGCTTCGCCGCCGTCATCCAGGCGCTGGATGGAGAGCTGCGGCATGCTGTCTGTATATTTTACCTAGTTCTCCGT
GCCCTGGACACCATAGAGGACGACATGACCATCAGCTTAGATGTAAAGGTCCCGATGCTGAATGAGTTTCACTCTTATC
TCCATCAGCCGGAGTGGAAATACATGGAGAGCAAGGAGAAGCACCGGCAGGTGCTGGAGGACTTCCCAACGATCTCCAT
GGAGTTTAGGAACCTGGCAAAGGTCTACCAGGATGTGATTTCTGATATTTGTCACAAGATGGGTGTTGGGATGGCGGAG
TTCTTGGAAAAGAAGGTGGATTCTCAGAGTGAGTGGGATCGGTATTGCCACTACGTTGCTGGGCTGGTGGGGATAGGCC
TTTCCCGACTCTTCTCTGCATCAGAGCTGGAAGACCCTATTGTAGGGCAGGACACAGAGTTGGCAAACTCCATGGGCCT
CTTCCTGCAGAAAACCAACATCATACGTGACTATCTAGAGGACCAGCTGGAAGGAAGAGAGTTCTGGCCCAGAGAGGTT
TGGAGCAGATACACGAAGAAGCTCTCTGACCTTACCAAGCCAGAGAACATAGATATGGCCGTCCAGTGTATGAATGAGC
TCATCACCAATGCTCTCCGCCACGTTCCTGATGTCCTCACTTACTTGTCTCGCCTGAAAAACCAAAGTGTCTTCAACTT
CTGTGCTATCCCCCAGGTGATGGCTATTGCCACTCTTGCTGCCTGCTATAACAACAAGCAGGTGTTCAGAGGGGTGGTG
AAGATTCGGAAGGGACAAGCTGTCACTCTGATGATGGATGCCACAAACATGCAGTCTGTCAAAGCCATCATGTACCAGT
ATGTGGAAGAGATCTACCAGAAGATCCCCAGCACGGATCCTTCCTCCAACAAGACGCAGCAGATCATCGCCTCCATCCG
TGCCATGAGCCTGCCCAGCGGCCCCATGGCCTCACGCCATCACTATTCCCCCATCTACCTGTCCTGTGCCATGCTCCTG
GCTGCCCTGAGCTGGCAGTACCTCAGCACCATCTCCAAGGCCGCCGAAGAGTACGTCCAGGCGGGTGAGAACTGAAGAG
CAGGCGGGTGGTGGGAGCGAGACAGTCAGTAGATGGGCAGCAGAGGCTCCTTGTCCCCTGGTGGTGGGGATGGCCGGGT
GCCACCGGGTCCATGGGCAGTGATGAGGATGGGATGCTGGTGGGTTGGAGCACTGGGGAAATGGCATGGCATCGTCAGA
CCCCGCTCCTCCCCTCTCCTTCTGTCTGCACAGATGGTTACAAATGCCAGTTGGAGTCTTAACTGTTTGGGGTTGAATT
GTTTTTTTCCTCCTTTCCTGTTGGACAGTTTACCTGATTATCACTATTCTTATTTTGGTTAGGATGGTTTAAATAGAAA
CTCCACTGCCTCTTTTCTTGCTTGAGATTTGAGACCCCTTTCCAGCTCAGAACTGGGATGGGAGCCTTTGGGTTTTGCC
TCCTTTACATAACCCCTTCCCCATCACTTCCACCCTGGAAGCATAGGTATGGCTCTGGCAGGGACTAGTCTTAGCTAAG
GGAAAGGTCTGGCCATCTTCTGGCCAGCAACCCAGGCTGGGTGACATCCTGCAGCCTGGAAACAGGCAGGGGCAATCTT
CACTTTTCTGTTGTACTGGAAGAGGCTGCTAGGCTTGAAACAAGCCCTTTTGTTGTTAAGTATATTGGAGGTGTTAATG
TGCATCCTACTGAAAGCCATCTGTTGCATCTCCTTCAAGCACGGTGCTGTGGAGCTGTAGAGCTTTGTATTTTAGCAGC
TGAGGAGTGGTGAAAGGGAGGGGGAAGGAGGTACCACCTACCCTCTGCTGCAAGGTCTGGGCTCTGTACTTCTTCAGCC
CAAGGGGATGGATGGGTGGCCTGGGCAGGCTTCCCTGGCCTACTTGGCTGCAGCTGGGGATGCTTAGGATTCAGTGACA
CATGAACTGGAAGAGTTCTCTGCTGCTTCTTTGAAAACACATCAACCTGGACTTCGAGTGGGCCACGTTTCTAATGTGA
ACAACCAGGGCTGGGAAGAGGAGACAACTACTTCAAGTCCCATTTTTCCTGGGGTGTAATTGTTTTCAGTGTCCCTAAT
CCTCCACTGCTGCTTTGTGTGATGGGGGGACAGCCTGGTACAGGACAGAGCAAAATCTACCAGGTAGTTCAGTGGCCTT
TGCAAGGCCAAGCCTGTGTGGCCAGACTGTTACTTGGAGGGAGGACCCCTACTCCACAAGGACTGATGTAGATAGTTTT
AAGCTGTTGTTCAAAAGAACTTGTGGTAGCTCCCTTTGTGCAGCTTCCTGTCTTGTTGAAATTAAAGTTTTCTTTGGAA
AGGAAAAAAAAAAAAAAA
CitationIsabel Olivera-Martinez, Nick Schurch, Roman A Li, Junfang Song, Pamela A Halley, Raman M Das, Dave W Burt, Geoffrey J Barton, Kate G Storey. Major transcriptome re-organisation and abrupt changes in signalling, cell cycle and chromatin regulation at neural differentiation in vivo. Development 2014 Aug;141(16):3266-76. Epub 2014 Jul 25. DOI: 10.1242/dev.112623.
CopyrightCopyright © 2014. Published by The Company of Biologists Ltd.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number NM_001039294.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
Neural Plate/Tube
 
all
 
  

Mouse

EmageMGI:102706
MGI GXDMGI:102706

Frog

Xenbase964782

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-081104-242
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