GEISHA - A Chicken Embryo Gene Expression Database
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HOXB6
homeobox B6

Gene
Official SymbolHOXB6
Official Full Namehomeobox B6
CGNC ID59035
also known asGHOX-2.2, homeobox protein Hox-B6|Homeobox protein Hox-2.2|Homeobox protein Hox-B6|homeobox protein Hox-B6-like
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_001236989
PolypeptideXP_001236990
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene777548
Ensembl Gene
KEGGgga:777548

Entry 1

GEISHA IdHoxb-6.Gaunt.1996Data SourcePublication
Complete cDNA Template Probeshow
AGACGTACACCCGTTACCAAACCCTGGAGCTGGAGAAGGAATTCCACTTCAACCGCTACCTGACCCGGCGCCGGCGGAT
CGAGATCGCCCACTCGCTCTGTCTGACGGAACGGCAGATCAAGATCTGGTTCCAGAACCGTCGGATGAAGTGGAAAAAA
GAGAACAAACTGCTCAGCTCCTCGCAGCTGAGCGCGGAGGAGGAGGAGAAAACGGCGGAGTGAAAGGAGCGTTTAAAAA
GAAAGGAGAGAGGGAGTGAGTGGGTGCGTGTGAGAGCCAGGAGGATGAGGGTGGTGTGGGCTGGCTG
CitationGaunt SJ, Strachan L. Temporal colinearity in expression of anterior Hox genes in developing chick embryos. Dev Dyn. 1996 Nov;207(3):270-80.
CopyrightCopyright © 1996 Wiley‐Liss, Inc.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Gaunt et al. 1996.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
 
25-30
stage 26
Somites
 
31-44
stage 44
stage 44
  

Entry 2

GEISHA IdHoxb6.Bel-Vialar.2002Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CTCTGAGCGCGCCGGGAACGCTTCTTTCCGCAGATATTATATATTTGGTTAAGGGGGTGCATTTCTGCTGTTTAAAAGG
GAGGGAAAAGGGGGTGGATGGTTTGTTCTTGGGGTCCCTGGTGCAATCTCAGCTCCTCATGGGTGCTATTTTGCAACCT
CAGGCGCCTGCTATTGGTCAGCCCATGATCAGATGGTTGTATTTCCTTGTGTCCCTCGCTGGCACCACGCCATCTCCCT
TCAGCTAAAACCCAATCTCCGATATACTACTAATAGCTAAACCACTTGGACTATAAAACACAACAAATCATAAAGCCGG
GAAAGGACGGCAGGCTCCTTCCAATGAGTTCTTATTTTGTCAACTCGACCTTCCCGGTGAGTCTGGCGGCGGGGCAGGA
GCCCTTCCTGGGACAGATCCCGTTATATCCCTCGGGCTATGCGGATCCTTTGAGGCACTACCCCAGCACCTATGGAGCC
ACGGGAGTCCAGGAGAAGGGCTATGCCTCCTCTCCCTACTACCAGCAAAGCAACGGAGCCTACAGCCGCAGCTCCGCCT
GTGACTATGGGGCCGGCGGCTTTTTCAGGGAGAAGGACCCTGCGTGCCCCCCCCCCAACCTGGACGAGGTCCCCTTCGC
CCCCGAGCCGCGCAAGTCGGACTGCGCGCAGAGCAAAACTGTGTTCGGAGAGAGCGAGGAGCAAAAGTGTTCCGCCCCG
GTTTACCCCTGGATGCAGCGGATGAACTCTTGCAATAGTGTCACAGGTTCCTCCTTCGGGCCCAGCGGCCGCAGAGGCC
GTCAGACGTACACCCGTTACCAAACCCTGGAGCTGGAGAAGGAATTCCACTTCAACCGCTACCTGACCCGGCGCCGGCG
GATCGAGATCGCCCACTCGCTCTGTCTGACGGAACGGCAGATCAAGATCTGGTTCCAGAACCGTCGGATGAAGTGGAAA
AAAGAGAACAAACTGCTCAGCTCCTCGCAGCTGAGCGCGGAGGAGGAGGAGGAGAAAACGGCGGAGTGAAAGGAGCGTT
TAAAAAGAAAGGAGAGAGGGAGTGAGTGGGTGCGTGTGAGAGCCAGGAGGATGAGGGTGGTGTGGGCTGGCTGCGAGGA
AGGGAAAACGCGCACATTGGTGGGACGAGAGCTCTGCGGAGACGGCGACAGCAACAGAAAAGTTTGGGCCACCAATGCC
ATGGACTCGTGTTCCCAATATCTGTCGTGTCCAGAACAAAAAAATCAGGCTTCTAGTTGCGTTTTTTTTTCTTCCTAGA
CTTCCCTCCCCATCCAACCCCCCCCCCTTTTCCCCCCATCCCCTAT
CitationSophie Bel-Vialar, Nobue Itasaki, Robb Krumlauf. Initiating Hox gene expression: in the early chick neural tube differential sensitivity to FGF and RA signaling subdivides the HoxB genes in two distinct groups. Development 2002 Nov;129(22):5103-15.
CopyrightCopyright © The Company of Biologists Limited 2002.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number XM_025144000.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Lateral Plate Mesoderm
Neural Plate/Tube
in between stage HH11-13

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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