GEISHA - A Chicken Embryo Gene Expression Database
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DLX1
distal-less homeobox 1

Gene
Official SymbolDLX1
Official Full Namedistal-less homeobox 1
CGNC ID53614
also known ashomeobox protein DLX-1|homeodomain transcription factor DLX1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001045842
PolypeptideNP_001039307
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1745ENSG00000144355MIM:600029
Mouse13390ENSMUSG00000041911MGI:94901
Xenopus100101750876849
Zebrafish100329678, 30568ENSDARG00000013125ZDB-GENE-990415-48ZFIN:ZDB-GENE-990415-48
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene429283
Ensembl Gene
KEGGgga:429283

Entry 1

GEISHA IdDLX1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCAGACCCCCAAAAGGCACG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGAGGCGGAGGAGGTGTTCCACcDNA Template Length721
Forward cDNA Template Probeshow
AAAAAAGGACGGGGCACGGGGGNAAACCGCCGGAAAGGGCCCGGCCGTTGCTCAGGGCGCCGCTCTCCAGGGCCGCCCC
TCCCTGCTTCATCAGCTTCTTGAATTTGGAGCGCTTGTTCTGGAACCAGATCTTCACCTGAGATCTGGGTGAGTCCCAG
AGAGGCCGCGAGCTCGGCTCTCTCGGGCAGGGCCAGGTACTGGGTTTGCTGGAACCTCCTGTTCAGAGCCTGCAGCTGC
AAACTGGAATAAATAGTCCTGGGTTTGCGGATTTTTTTCCCTTTCCCATTAAAGCGAACTTCCCCTCCTTCTACCACAG
TGCTTTTCTCCGATTCGGCCCCTGTCTCCTCCAGCCGGGGCTGGGCCAGGCCGGANCTGTTGGGGTAGGGCTGCACTGA
ACTGATGTAGGGGTTGCCGGAGTGGCTGCTCACCGAGTTCACATAGGGGTAGCCCAGCNGTCGGGAGAANGACGAANCT
GTGCTGTACGCGCTGTCGGGCTGCGAGTGGCCCGCCGAGTGTAAACAGTGCATGGAATAGTGTCCGTGGGACATGGNAN
AANGANACATTTGCTGGCCGGGCGGCCCNAACTCCATAAAGACGGCCTTCCCCGAGACGGGGCTGTTTAGACTCTCAGG
CATGGTGGTCATGGTCATTTCTCGCCGCTGGGTCTGTGTGTGTGCTCTCTCTTCANCGTGCCTTTGGNGGGGTCTG
CommentsNo expression detected at or before stage 10.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 10
Unlabeled
Stage 7 & 8.
Stages 9 & 10.
13-18
stage 13
stage 17
Pharyngeal Arches and Clefts
 
19-24
stage 19
stage 22
stage 23
Forebrain
Head Mesenchyme
Leg AER
Pharyngeal Arches and Clefts
Somites
Wing AER
 
25-26
stage 25
stage 26
stage 26
stage 26
stage 26
Face Mesenchyme
Leg Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somites
Spinal Ganglia and Nerves
Telencephalon
Wing AER
Wing Mesenchyme
 

Entry 2

GEISHA IdDLX1.Shigetani.2000Data SourcePublication
Complete cDNA Template Probeshow
ACAAACTCCATTTTCTTATGAATGGAAAGTGAAAACCCTGTTCCGCTTAAATTGGGTTCTTTCCCGTCCTGAGAAACAC
AACAGACCCCCAAAAGGCACGCTGAAGAGAGAGCACACACACAGACCCAGCGGCGAGAAATGACCATGACCACCATGCC
TGAGAGTCTAAACAGCCCCGTCTCGGGGAAGGCCGTCTTTATGGAGTTCGGGCCGCCCGGCCAGCAAATGTCTCCTTCT
CCCATGTCCCACGGACACTATTCCATGCACTGTTTACACTCGGCGGGCCACTCGCAGCCCGACAGCGCGTACAGCACAG
CTTCGTCCTTCTCCCGACCGCTGGGCTACCCCTATGTGAACTCGGTGAGCAGCCACTCCGGCAACCCCTACATCAGTTC
AGTGCAGCCCTACCCCAACAGCTCCGGCCTGGCCCAGCCCCGGCTGGAGGAGACAGGGGCCGAATCGGAGAAAAGCACT
GTGGTAGAAGGAGGGGAAGTTCGCTTTAATGGGAAAGGGAAAAAAATCCGCAAACCCAGGACTATTTATTCCAGTTTGC
AGCTGCAGGCTCTGAACAGGAGGTTCCAGCAAACCCAGTACCTGGCCCTGCCCGAGAGAGCCGAGCTCGCGGCCTCTCT
GGGACTCACCCAGACTCAGGTGAAGATCTGGTTCCAGAACAAGCGCTCCAAATTCAAGAAGCTGATGAAGCAGGGAGGG
GCGGCCCTGGAGAGCGGCGCCCTGAGCAACGGCCGGGCCCTGTCCGGCGGCTCTCCCCCGGTGCCCGCCGTGTGGAACA
CCTCCTCCGCCTCCGGGAAGGCGTCCTCGGGCAGCGCCGGCACCTACATCCCCAGCTACACGTCGTGGTACCCCTCGGC
CCACCAAGAAGCTATGCAGCAGCCGCAGCTTATGTGAGCCCGAACACGTTTTTTCCCGCCGCGAGCCGAAAAAAGAAAA
ATCAAATTATCACGGACAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAAGGGAAAAAAAAAGAAAAAAAAAG
AAAAAAAAAGAAAGTAAAAAAAAAAAAAAAAA
CitationShigetani Y, Nobusada Y, Kuratani S. (2000). Ectodermally derived FGF8 defines the maxillomandibular region in the early chick embryo: epithelial-mesenchymal interactions in the specification of the craniofacial ectomesenchyme. Dev Biol. 2000 Dec 1;228(1):73-85.
CopyrightReprinted with permission from Elsevier. Copyright © 2000 Academic Press. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001045842).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 15
stage 18
Pharyngeal Arches and Clefts
Mandibular Arch Mesenchyme
19-24
stage 24
stage 24
Pharyngeal Arches and Clefts
Figure 3 compares expression patterns of mesenchymally expressed homeobox genes (Msx1, Fgf8, Dlx1, and Barx1) in chick embryo at HH stages 13, 15, 17, 19, 20, 23 and 24.
Mandibular Arch Mesenchyme
Maxillary Process

Entry 3

GEISHA IdDLX1.Bielle.2011Data SourcePublication
Complete cDNA Template Probeshow
ACAAACTCCATTTTCTTATGAATGGAAAGTGAAAACCCTGTTCCGCTTAAATTGGGTTCTTTCCCGTCCTGAGAAACAC
AACAGACCCCCAAAAGGCACGCTGAAGAGAGAGCACACACACAGACCCAGCGGCGAGAAATGACCATGACCACCATGCC
TGAGAGTCTAAACAGCCCCGTCTCGGGGAAGGCCGTCTTTATGGAGTTCGGGCCGCCCGGCCAGCAAATGTCTCCTTCT
CCCATGTCCCACGGACACTATTCCATGCACTGTTTACACTCGGCGGGCCACTCGCAGCCCGACAGCGCGTACAGCACAG
CTTCGTCCTTCTCCCGACCGCTGGGCTACCCCTATGTGAACTCGGTGAGCAGCCACTCCGGCAACCCCTACATCAGTTC
AGTGCAGCCCTACCCCAACAGCTCCGGCCTGGCCCAGCCCCGGCTGGAGGAGACAGGGGCCGAATCGGAGAAAAGCACT
GTGGTAGAAGGAGGGGAAGTTCGCTTTAATGGGAAAGGGAAAAAAATCCGCAAACCCAGGACTATTTATTCCAGTTTGC
AGCTGCAGGCTCTGAACAGGAGGTTCCAGCAAACCCAGTACCTGGCCCTGCCCGAGAGAGCCGAGCTCGCGGCCTCTCT
GGGACTCACCCAGACTCAGGTGAAGATCTGGTTCCAGAACAAGCGCTCCAAATTCAAGAAGCTGATGAAGCAGGGAGGG
GCGGCCCTGGAGAGCGGCGCCCTGAGCAACGGCCGGGCCCTGTCCGGCGGCTCTCCCCCGGTGCCCGCCGTGTGGAACA
CCTCCTCCGCCTCCGGGAAGGCGTCCTCGGGCAGCGCCGGCACCTACATCCCCAGCTACACGTCGTGGTACCCCTCGGC
CCACCAAGAAGCTATGCAGCAGCCGCAGCTTATGTGAGCCCGAACACGTTTTTTCCCGCCGCGAGCCGAAAAAAGAAAA
ATCAAATTATCACGGACAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAAGGGAAAAAAAAAGAAAAAAAAAG
AAAAAAAAAGAAAGTAAAAAAAAAAAAAAAAA
CitationBielle F, Marcos-Mondejar P, Keita M, Mailhes C, Verney C, Nguyen Ba-Charvet K, Tessier-Lavigne M, Lopez-Bendito G, Garel S. Slit2 activity in the migration of guidepost neurons shapes thalamic projections during development and evolution. Neuron. 2011 Mar 24;69(6):1085-98.
CopyrightCopyright © 2011 Elsevier Inc. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001045842.2 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-27
stage 27
stage 27
Telencephalon
 

Entry 4

GEISHA IdDLX1.Frowein.2002Data SourcePublication
Complete cDNA Template Probeshow
ACAAACTCCATTTTCTTATGAATGGAAAGTGAAAACCCTGTTCCGCTTAAATTGGGTTCTTTCCCGTCCTGAGAAACAC
AACAGACCCCCAAAAGGCACGCTGAAGAGAGAGCACACACACAGACCCAGCGGCGAGAAATGACCATGACCACCATGCC
TGAGAGTCTAAACAGCCCCGTCTCGGGGAAGGCCGTCTTTATGGAGTTCGGGCCGCCCGGCCAGCAAATGTCTCCTTCT
CCCATGTCCCACGGACACTATTCCATGCACTGTTTACACTCGGCGGGCCACTCGCAGCCCGACAGCGCGTACAGCACAG
CTTCGTCCTTCTCCCGACCGCTGGGCTACCCCTATGTGAACTCGGTGAGCAGCCACTCCGGCAACCCCTACATCAGTTC
AGTGCAGCCCTACCCCAACAGCTCCGGCCTGGCCCAGCCCCGGCTGGAGGAGACAGGGGCCGAATCGGAGAAAAGCACT
GTGGTAGAAGGAGGGGAAGTTCGCTTTAATGGGAAAGGGAAAAAAATCCGCAAACCCAGGACTATTTATTCCAGTTTGC
AGCTGCAGGCTCTGAACAGGAGGTTCCAGCAAACCCAGTACCTGGCCCTGCCCGAGAGAGCCGAGCTCGCGGCCTCTCT
GGGACTCACCCAGACTCAGGTGAAGATCTGGTTCCAGAACAAGCGCTCCAAATTCAAGAAGCTGATGAAGCAGGGAGGG
GCGGCCCTGGAGAGCGGCGCCCTGAGCAACGGCCGGGCCCTGTCCGGCGGCTCTCCCCCGGTGCCCGCCGTGTGGAACA
CCTCCTCCGCCTCCGGGAAGGCGTCCTCGGGCAGCGCCGGCACCTACATCCCCAGCTACACGTCGTGGTACCCCTCGGC
CCACCAAGAAGCTATGCAGCAGCCGCAGCTTATGTGAGCCCGAACACGTTTTTTCCCGCCGCGAGCCGAAAAAAGAAAA
ATCAAATTATCACGGACAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAAGGGAAAAAAAAAGAAAAAAAAAG
AAAAAAAAAGAAAGTAAAAAAAAAAAAAAAAA
CitationFrowein J, Campbell K, Götz M. Expression of Ngn1, Ngn2, Cash1, Gsh2 and Sfrp1 in the developing chick telencephalon. Mech Dev. 2002 Jan;110(1-2):249-52.
CopyrightCopyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001045842.2 )
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
Telencephalon
 

Entry 5

GEISHA IdDLX1.Brown.2005Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ACAAACTCCATTTTCTTATGAATGGAAAGTGAAAACCCTGTTCCGCTTAAATTGGGTTCTTTCCCGTCCTGAGAAACAC
AACAGACCCCCAAAAGGCACGCTGAAGAGAGAGCACACACACAGACCCAGCGGCGAGAAATGACCATGACCACCATGCC
TGAGAGTCTAAACAGCCCCGTCTCGGGGAAGGCCGTCTTTATGGAGTTCGGGCCGCCCGGCCAGCAAATGTCTCCTTCT
CCCATGTCCCACGGACACTATTCCATGCACTGTTTACACTCGGCGGGCCACTCGCAGCCCGACAGCGCGTACAGCACAG
CTTCGTCCTTCTCCCGACCGCTGGGCTACCCCTATGTGAACTCGGTGAGCAGCCACTCCGGCAACCCCTACATCAGTTC
AGTGCAGCCCTACCCCAACAGCTCCGGCCTGGCCCAGCCCCGGCTGGAGGAGACAGGGGCCGAATCGGAGAAAAGCACT
GTGGTAGAAGGAGGGGAAGTTCGCTTTAATGGGAAAGGGAAAAAAATCCGCAAACCCAGGACTATTTATTCCAGTTTGC
AGCTGCAGGCTCTGAACAGGAGGTTCCAGCAAACCCAGTACCTGGCCCTGCCCGAGAGAGCCGAGCTCGCGGCCTCTCT
GGGACTCACCCAGACTCAGGTGAAGATCTGGTTCCAGAACAAGCGCTCCAAATTCAAGAAGCTGATGAAGCAGGGAGGG
GCGGCCCTGGAGAGCGGCGCCCTGAGCAACGGCCGGGCCCTGTCCGGCGGCTCTCCCCCGGTGCCCGCCGTGTGGAACA
CCTCCTCCGCCTCCGGGAAGGCGTCCTCGGGCAGCGCCGGCACCTACATCCCCAGCTACACGTCGTGGTACCCCTCGGC
CCACCAAGAAGCTATGCAGCAGCCGCAGCTTATGTGAGCCCGAACACGTTTTTTCCCGCCGCGAGCCGAAAAAAGAAAA
ATCAAATTATCACGGACAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAAGGGAAAAAAAAAGAAAAAAAAAG
AAAAAAAAAGAAAGTAAAAAAAAAAAAAAAAA
CitationStephen T Brown 1, Juemei Wang, Andrew K Groves. Dlx gene expression during chick inner ear development. J Comp Neurol. 2005 Feb 28;483(1):48-65.0
Copyright© 2005 Wiley-Liss, Inc.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Brown et al. 2005.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
Pharyngeal Arches and Clefts
 
19-24
stage 24
Ear/Otic Placode
cvg, cochleovestibular ganglion
all
 
 
  

Mouse

EmageMGI:94901
MGI GXDMGI:94901

Frog

Xenbase876849

Fruit Fly

BDGP

Zebra Finch

ZEBrADLX1

Zebrafish

ZFINZDB-GENE-990415-48
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