GEISHA - A Chicken Embryo Gene Expression Database
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CD44
CD44 molecule (Indian blood group)

Gene
Official SymbolCD44
Official Full NameCD44 molecule (Indian blood group)
CGNC ID5938
also known asCD44 antigen|CD44-like protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204860
PolypeptideNP_990191
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3572
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human960ENSG00000026508MIM:107269
Mouse12505ENSMUSG00000005087MGI:88338
Xenopus394545, 443701487546
Zebrafish100330801ENSDARG00000089892ZDB-GENE-110429-1, ZDB-GENE-110429-2ZFIN:ZDB-GENE-110429-1, ZFIN:ZDB-GENE-110429-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene395666
Ensembl GeneENSGALG00000007849
KEGGgga:395666

Entry 1

GEISHA IdCD44.Roddy.2011Data SourcePublication
Complete cDNA Template Probeshow
CATTCAAAGTCTGCCAGTAAAAGCAAAAAGTGACATTTTGTAATGATTGATGACTTGGTCTGTAACAAGAGAAACCCAG
AAGGACAAAGTTTATTTATCTATATTTTAAAATGTCTGTGGGCATACAGCAGGATTTTTTGGGAGGGG
CitationRoddy KA, Prendergast PJ, Murphy P. Mechanical influences on morphogenesis of the knee joint revealed through morphological, molecular and computational analysis of immobilised embryos. PLoS One. 2011 Feb 28;6(2):e17526.
CopyrightPLoS One is an open access journal.
CommentsThe cDNA template used to generate the probe was obtained from EST - ChEST343m10 as described in the paper
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-27
stage 27
stage 27
Leg
il, intermediate layer
p, patella

Entry 2

GEISHA IdCD44.Singh.2016Data SourcePublication
Complete cDNA Template Probeshow
CACAAGGGAGACGGTGAACCTACTTCTTCCCCTGGATTGTCCACAACAACAACTGTAACGTCACAACCAGGGACAGCCC
ATGTACCAGAATGGCTGATCATCGTTGCTGCCCTCCTGGCACTGGCATTGATCCTTGCCGTGTGCATCGCGGTTAACAG
CCAGAGGAGATGTGGGCAGAAGAAAAAGCTAGTCATTAATAATGGCAAAGGTGCAGTGGAGGACAGGAAGACAAGAGAA
TTAAACGGAGATGCCAGCAAGTCACAAGAAATGGTGCACTTGGTTCACAAAGAACAGTCAAATGACCGAACAGGAGCAT
GTGACGAATTCCTCACCGTTGATGAAACACAAAATCATCAGGATGGTGACATGAAGAGTGGAGTGTAGCGGTACGAAGT
CACCAAATAGATCAGTGTTGGGAAAATCAAAGTCACACGGACCTTGGGCAGGAGTTCACAGATGCACTGTGCTACTGAT
GTCTTTTGAACACGATTAAGCTTAAATTTTCTTCATTTTTAATTATTTTGACATGGTGTCCGAGTTACAAAATTGACAT
TTGCTTTCTGAAATAAGCCCCAAGTGTTGCAGTCAGTTCCCAGTTCCTACACAGAGGGCACTTACAGTGTCCTGGGCAT
GTGGCATGTCATTGTTCCCCCAAATGCGGTGCCTTCGCTGTGCGGCAGATACAGAAGCATCCAGTTGCTCCATCTTACA
GGCATTTAAGGTACTAAACTGGTTGTGGTACAACAGTAAGTGAGTAAC
CitationSingh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
CopyrightCopyright © 2015 Elsevier B.V. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST650k15.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
Limb Buds
 
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3572

Mouse

EmageMGI:88338
EurexpressMGI:88338
MGI GXDMGI:88338

Frog

Xenbase487546

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-110429-1, ZDB-GENE-110429-2
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