GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

POU3F4
POU class 3 homeobox 4

Gene
Official SymbolPOU3F4
Official Full NamePOU class 3 homeobox 4
CGNC ID65597
also known asPOU3F3, POU domain, class 3, transcription factor 4|POU class 3 homeobox 3
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_003641077
PolypeptideXP_003641125
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene100857422
Ensembl Gene
KEGGgga:100857422

Entry 1

GEISHA IdqBrn-1.Lan.2006Data SourcePublication
Complete cDNA Template Probeshow
TGTGGTCTGCAGATGGCTGAGCCTCTGCATAGGGGAATAGAGGGGACTGCATAGGAAGAATACCCCAGAACTTGGCAGC
TGTTGCGTGCAATGGGTGCAAGCCCCTAACACAGTGTGGAAGCCATTTATCTGTACTTCTCAGTCAGAACAGAGGAGAT
GCCGGCCAGAAACTTGTCCCATGCAGCATGAACTTCTGGGGTGAAATCATTGGGATAGCGGGCAGCCACGGAGCACAGG
ATACAGTGGGAAAGCAGCTTGAAGTTCACTGGGTCCACCCTAAGGATGTAAGCATGCAGCTCGCTGAGTTTGGCCAAAG
CACCTCTAATATCATCGATGTTCTTCACGGCTTCCCCAATGGCATTCAGGACCTTGGAGCCGTGACCACGAAGCTGAAC
GGAGCCTTGGCTGAGATCAAAGTGAGGGAAGTAGGTTTTCGTCTGAGGGTAGCTGGCAAAAAGCCTCTCCAGTGATTCC
ACCCCAATGGCCTCCCTGTACTCGCAGCCCGGGGGCTTCACGGTGAACGGCATGCTGAGCCCCGCGGGCGGCGGACAGA
GCCTGGTGCACCCCGGGCTGGTGCGCGGCGGAGAGACGGCGGAGCTGGGCGAGCACCCCGGGCATCACCATCACCACCA
CCACCCGCACCCCGGGCACCACGCGCCGCACCACGGCGCCGTCAACAGCCACGAGGCGCACTCGGACGAGGACACGCCG
ACCTCGGACGACCTGGAGCAGTTCGCCAAGCAGTTCAAGCAGCGGCGGATTAAGCTGGGCTTCACGCAGGCCGACGTGG
GGCTGGCGCTGGGCACCCTGTACGGCAACGTCTTCTCGCAGACCACCATCTGCCGCTTCGAGGCCCTGCAGCTCAGCTT
CAAGAACATGTGCAAGCTGAAGCCTTTGTTGAACAAGTGGCTGGAGGAAGCCGACTCCTCCACCGGCAGCCCCACCAGC
ATCGACAAGATCGCGGCGCAGGGCAGGAAGAGGAAGAAGCGGACCTCCATCGAGGTGAGTGTCAAGGGGGCCTTGGAGA
GCCACTTTCTGAAATGCCCCAAGCCCTCCGCCCAGGAGATTACGAACCTAGCGGACAGCCTGCAGCTGGAGAAGGAGGT
GGTCAGGGTTTGGTTTTGCAATCGGAGGCAGAAAGAGAAACGCATGACCCCGCCGGGGATCCAGCAGCAGACCCCCGAC
GATGTCTACTCGCAGGTCGGCGCCGTCAGCTCCGACACGCCGCCCCCTCACCACGGACTGCAGAGCGGCGTGCAGTGAG
CTGGGCTCCGCGGGGCCGGGCCGGGAGAGCTCCGGCGGCGGCGGCGGCGGCGCCGCGCTCACACACACGGACACGGACA
CTCACACTCACACGCACGCACGCACTCACACACACACACACACACTCGCGCGCGGGCCGGGCTCGCTCGGGCCGCCCGT
GTCGGTATATGTACGGATAGAGGAGGGCGCCTGGATCTATCTGTCTATACGGGATCGATAGAGAGAGGGAGCGCCGGGG
AAGGTCGAGCCGAGCGAGAGCGTTTCCGCTGCGTTGGGAGAACGGGGTGGAGATGCGTAATGCACCAAAACTGCAGATG
TGCCGGGGGCTGCTGTGGGAAGAGGGCTCGGCCGGGTGGGTTCTGCCTTGGGTTTCTGTTCGGGTTTTTGCTTTTCGCC
CCCCCTCCTCCCCCCTCCCCCGTGAGCCCCTCTCTCAGAGATGGGGTCTGCATCTCTCCCCTCCTCCCCCCCCCCGTGC
TCTCCCCTATCCCCAAAGGGCTCTTCTCTCAATCACGGAAACTTTATTTTTCCCCCCTTCCTTTTCCTCTACGCCTTCC
CTCTCCCCCCCCCCCCCTTTTTTTTTTTTCCTTATTATTATTATTATTATTTCCCCTTTATTTTCTTTATTTATTTTCA
TTCCTTTTATTTTTATTAGATTTTTTTTTCTCAATGGGAGAGATCC
CitationLan L, Liu M, Liu Y, Liu Y, Zhang W, Xue J, Xue Z, He R. Expression of qBrn-1, a new member of the POU gene family, in the early developing nervous system and embryonic kidney. Dev Dyn. 2006 Apr;235(4):1107-14.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsQuail. Probably a POU3F3 gene (currently none ID'd in chick). Currently blasts to reverse strand of HBPI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Ear/Otic Placcode
Primitive Streak
Rhombomeres
quail
7-12
stage 7
stage 7
stage 9
stage 9
stage 10
stage 10
stage 11
stage 11
stage 12
stage 12
Ectoderm
Eye
Forebrain
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Nephric Ducts
Nephric Tubules
Neural Crest
Neural Plate/Tube
Notochord
Primitive Streak
Renal
Rhombomeres
Somites
Spinal Cord
quail
13-18
stage 17
Nephric Ducts
Neural Plate/Tube
 
19-24
stage 19
stage 19
stage 24
Ear/Otic Placcode
Eye
Forebrain
Hindbrain
Intermediate Mesoderm
Isthmus/MHB
Midbrain
Nephric Ducts
Nephric Tubules
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Spinal Cord
quail
25
stage 25
Nephric Ducts
Nephric Tubules
Spinal Cord
 

Entry 2

GEISHA IdqBrn-2.Lan.2006Data SourcePublication
Complete cDNA Template Probeshow
GCGAGCAGAGCGCGCGCGAGTCATGGCGACCGCAGCCTCCAACCACTACAGCCTGCTCGCCTCCGGCTCGCCCATGGTG
CACGCCGAGCCGCCCGGCGGCATGCAGCCCGGCGGAGGCTACCGCGACGCGGGCGCGCTGGTGCAGGCGGACTACGCGC
TGCAGAGCAACGGGCACCCGCTGAGCCACGCTCACCAGTGGATCGCCGCGCTGTCCCACGGCGGCCCCGGCGGCGGCGG
CGGAGGAGGGGGCGGCGGCGGCGGAGGGGGCGGCGGAGGCGGCGAGGCTCCCTGGGCGGCGGCGGCGGCGGCGGCGGCG
GGCGCGCTGGGCCCGCCCGACATCAAGCCGGCCGCGGTGCAGGCGGCCCCGCGCGGCGACGAGCTGCCGCCGCCTCCGC
AGCACCCGCCGCCGCCGGGCCGAGCCCCGCACCTGGTGCACCACGGCGGCGGAGGCGGCGGGCACCACGCGGCGTGGCG
GGCGGGCGGCGCGGCGCACCTGCCGCCGGGCATGGCCGCGGCCAACGGAGCGGCGCAGGCGGGGCTGCTGTACCCGCAG
CCGCCCGGCTTCACCGTGAACGGCATGTTGGGCGCCGCGCAGCCCGCCCTGCACCACCACGGCCTCCGCGACGCCCACG
ACGAGGCTCCCGGGCCGCCCGCGCCGCCGCACCACGGCGCCGAGCACCCGCACGGGCCGCACCCCGCGGGCGGAGCGGG
GCCGGGGGGCGGCGGAGCGGCGGCGGCGGGAGGGCCGCACCACGAGGCGCACTCGGACGAGGACACGCCGACCTCGGAC
GACCTGGAGCAGTTCGCCAAGCAGTTCAAGCAGCGGCGGATAAAGCTGGGATTTACCCAAGCGGACGTGGGGCTGGCGC
TGGGCACGCTGTACGGCAACGTCTTCTCGCAGACCACCATCTGCCGCTTCGAGGCCCTGCAGCTCAGCTTCAAGAACAT
GTGCAAGCTGAAGCCTTTGTTGAACAAGTGGTTGGAGGAGGCGGACTCCTCCTCGGGCAGCCCCACCAGCATAGACAAG
ATCGCGGCGCAGGGCCGCAAGCGGAAAAAGCGCACCTCCATCGAGGTGAGCGTCAAGGGCGCGCTGGAGAGCCACTTCC
TCAAGTGCCCCAAGCCCTCGGCGCAGGAGATCACCTCGCTGGCGGACAGCCTTCAGCTGGAGAAGGAGGTGGTGAGAGT
GTGGTTTTGTAACAGGAGACAGAAGGAGAAGCGCATGACGCCGCCCGGGGGGACGCTGCCGGGCGCCGAGGACGTGTAC
GGGCCCAGCAGGGACACGCCGCCGCACCACGGGGTGCAGACCCCCGTGCAGTGACCTGGGCGCCCTCATTCCCCCCCCC
CTTTCCTCCTCCTCCTCCTTCCCCCGCCTTTCCGGCGTCCTCCTTTCAGTGTTGGGGTTGCTTTTTGTTGGTTTTATTT
TTTCTTTGTTTTTAATTTTCTCCTCTCTTTC
CitationLan L, Liu M, Liu Y, Liu Y, Zhang W, Xue J, Xue Z, He R. Expression of qBrn-1, a new member of the POU gene family, in the early developing nervous system and embryonic kidney. Dev Dyn. 2006 Apr;235(4):1107-14.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsQuail; probably POU3F2 (none yet ID'd in chick).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Unlabeled
quail
7-12
stage 7
stage 9
stage 10
stage 11
stage 11
stage 12
stage 12
Eye
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Pituitary (Rudiment)
Rhombomeres
Spinal Cord
Spinal Ganglia and Nerves
quail
19-24
stage 19
stage 24
Eye
Forebrain
Hindbrain
Midbrain
Spinal Cord
quail

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona