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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CNOT1
CCR4-NOT transcription complex subunit 1

Gene

Official Symbol	CNOT1
Official Full Name	CCR4-NOT transcription complex subunit 1
BirdBase ID	BB-GG51305
CGNC ID	1639
also known as	CCR4-NOT transcription complex subunit 1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001277133
Polypeptide	NP_001264062
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.53936

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	100858397
Ensembl Gene	ENSGALG00000002301
KEGG	gga:100858397

GEISHA Id	Not1.Chapman.2008	Data Source	Direct Submission
Complete cDNA Template Probe	show CGTGAGCGCGCGACCTGTCCGCCATTTTGTAGCGCAACGGCGGAGACGAGAGGAGAAAAGCGCGAGCGGCCGCAGCCCG GCGCCTTGCTCCGGCCCCGCCGCCTCTGAGGTGCCATGTTTCTGTACAGAGGAAGACAACTGAGAAAGAGCTGAAGAAA GTAACACAACCAGATACAGGCTAATTGGGGGAAAAACAATTAACCTGTCTCTGAGGTGACTAAAGGGGAATAATGGTGA TTTTGCGCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAA TCAGCTACCTGGTGGACAATTTAACCAAGAAAAACTACCGAGCCAGCCAGCAAGAAATACAGCACATTGTGAATAGGCA CGGTCCCGAGGCAGACAGGCATTTACTACGCTGTCTATTCTCGCACGTGGATTTCAGTGGCGATGGTAAAAGCAGTGGC AAAGATTTCCATCAGACTCAATTTCTGATCCAGGAGTGTGCGTCGCTGATTACAAAACCAAACTTTATCTCGACGCTGT CCTACGCCATTGACAATCCATTGCACTATCAGAAGAGTCTAAAGCCTTCACCCCATTTATTTGCCCAATTGAGTAAAGT CATCAAATTAAGTAAAGTTCAAGAGGTGATATTTGGTCTCGCTTTACTGAACTCTTTCAGCTCAGATCTACGAGGTTTT GCTGCCCAGTTTATCAAACAGAAACTCCCAGATCTTTTACGCTCTTACATTGACGCGGACGTCAGTGGAAATCAAGAAG GTGGCTTCCAAGATATTGCAATAGAGGTCCTGCACCTTCTCCTCTCCCATCTCCTTTTTGGGCAGAAGGGAGCCTTTGG GGTGGGACAGGAACAGATTGACGCTTTCCTCAAAACATTACGTAGAGATTTTCCCCAGGAGCGTTGCCCTGTGGTGCTT GCACCACTTCTATACCCTGAAAAACGGGACATTCTAATGGACAGGATCCTGCCTGATTCTGGAGGGATAGCCAAAACAA TGATGGAGAGTTCTCTGGCAGACTTTATGCAAGAAGTTGGCTATGGCTTTTGTACAAGCATTGAAGAATGTCGCAACAT AATCATGCAGTTTGGAGTCCGGGAGGTGACGGCTGCCCAGGTTGCCAGGGTTCTGGGGATGATGGCTCGAACGCATTCG GGGTTGACGGATGGTATTCCATTACAATCTATTTCGGCTCCTGGCAGTGGAATTTGGAGCGATGGGAAAGATAAAAGTG ATGGAGCACAAGCCCATACCTGGAATGTGGAGGTCCTAATTGATGTTCTTAAAGAGCTGAATCCTAGCCTGGATTTCAA AGTAGTAACGTATGAATTGGACCACCCAGGATTTCAGATTCGTGACAGCAAAGGCCTGCATATTGTGGTGTTTGGCATC CAGAGAGGGCTAGGCATGGAAGTTTTTCCAGTTAATGCCATATACAGACCTTGGAAGCATGCAGAGGGCCAGCTCTCCT TCATTCAACATTCCCTCATAAACCCGGACATCTTTTGTTTTGCTGACTACCCTTGTCATGCTGTTACCACAGACATCCT GAAAGCACCACCAGAGGATGACAATCGAGAAATTGCTACATGGAAGAGCCTGGATTTGATCGAATCTCTGTTACGGTTG GCAGAAGTGGGACAGTATGAGCAGGTTAAGCAGCTCTTCAGTTTTCCCATCAAGCATTGCCCAGATATGTTGGTATTGG CCTTATTGCAGATCAACACTTCCTGGCATACCTTGCGCCATGAACTCATCTCCACGCTCATGCCAATCTTCCTTGGCAA CCATCCCAATTCTGCCATCATTTTGCACTATGCATGGCATGGGCAGGGTCAGTCTCCTTCGATTCGCCAGCTTATCATG CATGCAATGGCAGAATGGTACATGAGAGGGGAGCAGTATGACCAGGCAAAATTGTCACGTATTCTTGATGTGGCGCAAG ACTTGAAGGCCTTGTCAATGCTGCTAAATGGTACTCCGTTTGCCTTTGTTATTGACCTTGCTGCACTTGCCTCTCGACG AGAATACCTCAAACTTGACAAATGGCTCACAGACAAAATTCGGGAGCATGGGGAGCCCTTCATCCAGGCCTGCATGACC TTCTTAAAGAGAAGATGTCCATCTATCCTAGGTGGCCTTGCTCCAGAAAAAGATCAACCCAAAAGTGCTCAGCTTCCTC CAGAAACCTTGGCAACTATGTTGGCATGCCTGCAGGCTTGTGCTGGGAGTGTTTCTCAGGAGCTGTCGGAGACCATCCT CACCATGGTAGCCAACTGCAGTAATGTCATGAACAAGGCCAGACAGCCACCACCTGGAGTCATGCCCAAAGGCCGCCCG CCCAGCGCGAGCAGCCTGGATGCCATCTCTCCTGTGCAGATTGACTCGCTTGCAGGAATGGCATCTCTGAGTTTAGGTG GCTCGGCTGCTCCTCACACCCAGAGCATGCAAGGCTTCCCTCCAAACTTGGGCTCTGCGTTCAGTACTCCTCAGTCACC AGCAAAAGCGTTTCCCCCTCTTTCCACCCAAAACCAGACAACAGGTTTCAGTGGCATTGGAGGACTCTCTTCACAGCTT CCAGTAGGTGGTCTTACTACGGGTAGCCTGACTGGCATAGGAACTGGAGCCCTGGGCCTTCCTGCAGTGAACAATGACC CATTCGTGCAAAGGAAGCTGAGCACATCTGGACTGAGCCAGCCTACGTTCCAGCAGAGTAAGATGAAACCTTCTGACTT ATCTCAGGTGTGGCCAGAGGCTAATCAGAACTTTAGCAAAGAAATAGATGATGAGGCAAACAGCTACTTCCAGCGTATC TATAACCATCCACCACATCCAACCATGTCTGTAGATGAGGTCTTGGAAATGCTGCAGAGGTTTAAGGACTCCAATATTA AACGGGAACGAGAAGTGTTTAACTGTATGCTGAGGAACTTGTTTGAGGAATACCGTTTCTTTCCCCAGTACCCAGACAA AGAGCTGCACATAACAGCCTGCCTCTTTGGTGGGATAATAGAGAAAGGACTGGTTACTTACATGGCTTTGGGCCTGGCC CTTCGCTACGTTCTTGAAGCCTTACGAAAGCCTTTTGCGTCCAAAATGTACTATTTTGGTATTGCTGCACTAGATAGAT TTAAAAATAGATTGAAGGACTATCCCCAGTATTGTCAGCACTTGGCTTCTATTAGTCACTTTATACAGTTCCCTCATCA CTTGCAGGAGTACATAGAATACGGACAGCAGTCTAGAGATCCTCCTGTGAAAATGCAGGGTTCAATCACCACCCCTGGA AGTATTGCACTTGCCCAGGCTCAGGCCCAGGCCCAGGTTCCAGCAAAGGCTCCTCTTGCTGGCCAAGTCAGCACTATAG TAACCACCTCAACCACCACCACTGTTGCAAAAACCATCACGATCACTCGACCAACTGGAGTCAGCTTCAAGAAAGATGT GCCGCCTTCCATTAATACTACCAACATTGATACACTGTTAGTAGCAACGGATCAAACTGAGAGAATTGTGGAACCTCCA GAGAACGTCCAGGAAAAAATTGCTTTCATCTTCAATAATCTGTCTCAGTCAAACATGACACAGAAGGTTGAAGAACTGA AGGAAACAGTGAAAGAAGAGTTCATGCCTTGGGTATCGCAGTATCTCGTGATGAAGAGAGTCAGCATTGAGCCAAATTT TCACAGCTTATATTCAAACTTCCTTGACACCCTTAAGAATCCAGAGTTTAATAAAATGGTTCTGAATGAAACTTACAGA AATATCAAGGTGCTACTGACATCAGATAAGGCTGCAGCCAACTTCTCCGACCGTTCCTTGTTAAAGAACCTTGGTCACT GGCTGGGAATGATTACCCTGGCTAAAAATAAACCCATCTTGCACACGGATTTGGATGTGAAGTCACTACTACTGGAAGC GTATGTGAAGGGACAGCAGGAATTGCTTTATGTAGTACCATTTGTTGCCAAAGTCTTAGAATCCAGTGTCAGGAGTGTG GTCTTCAGGCCTCCAAACCCATGGACAATGGCCATTATGAATGTTTTAGCTGAGCTGCATCAAGAACATGATCTAAAAG TAAATTTTCTGCTTTGTTTGTACCTATTGAGCTTGAGGTTTTCTTGACACACCAGTCAGNCTGAACCTGGCAGTCTCCT GAAAGATAAGGATCGTCTGAAAAATCTGGATGAGCAGCTGTCTGCTCCAAAGAAGGATGTGAAGCAGCCAGAAGAGCTA CCACCCATCACAACAACCACCGCTTCTACAACTCCAGCTACCAGCACCACTTGTACAGCCACAGTTCCTCCACAGCCCC AGTACAGTTATCATGACATCAATGTCTATTCATTAGGAGGACTGGCTCCACACATTACCTTAAATCCAACGATCCCGCT GTTTCAGGCCCACCCCCAGCTGAAGCAGTGTGTGCGGCAGGCTATAGAGCGAGCGGTGCAGGAGCTCGTCCATCCCGTG GTCGATCGGTCCATTAAGATTGCCATGACTACTTGTGAGCAGATAGTCAGGAAGGACTTTGCACTGGATTCGGAGGAGT CACGAATGCGTGTGGCTGCACACCATATGATGCGGAACTTGACTGCTGGGATGGCCATGATCACCTGCAGGGAACCTTT GCTCATGAGCATAGCTACCAACTTGAAGAACAGTTTTGCTACTGCGCTGAGGGCAGCCTCCCCACAACAGAGGGACATG ATGGAGCAAGCAGCTGCCCAGCTGGCGCAGGATAACTGTGAGCTGGCGTGCTGCTTTATCCAGAAGACAGCTGTGGAAA AAGCAGGCCCTGAAATGGACAAGAGGCTGGCGACTGAATTTGAGCTCAGAAAACATGCTAGACAAGAGGGTCGTCGGTA CTGTGATCCTGTTGTGTTAACTTACCAAGCTGAACGGATGCCAGAACAGATCAGGTTAAAGGTTGGAGGTGTGGACCCA AAACAGCTGGCTGTTTACGAAGAGTTCGCACGTAACGTCCCCGGCTTCTTGCCTACCAATGACTTAACTCAGCCTACAG GATTCTTGGCTCAACCTATGAAGCAAGCTTGGGCCACAGATGATGTAGCACAAATCTATGACAAATGCATGACAGAACT GGAGCAGCACCTACAGTCCATTCCCCATACTCTGGCCATGAATCCTCAAGCTCAAGCATTACGCAGCCTCCTGGAGGCT GTGGTGGTCGCTCGGAACTCCCGTGATGCCATCGCTGCGCTTGGACTGCTGCAGAAGGCTGTAGAGGGCTTACTGGATG CCACCAGTGGGGCAGATGCTGACCTTCTGCTTCGCTATCGTGAGTGTCACCTGCTGGTGCTGAAGGCTCTGCAGGACGG CCGTGCGTATGGATCTCCGTGGTGTAACAAGCAGATTACCAGGTGCCTGATTGAGTGTAGAGATGAGTACAAGTACAAC GTGGAAGCTGTGGAGCTGCTAATCCGCAATCACCTGGTTAACATGCAGCAGTATGATCTTCACCTGGCACAGTCAATGG AGAACGGCTTGAACTATATGGCTGTGGCATTTGCCATGCAGTTGGTAAAGATCCTTCTTGTGGATGAGAGAAGTGTTGC CCATGTAACAGAGGCAGATCTGTTCCACACCATCGAGACGCTCATGAGGATTAATGCTCATTCCAGAGGGAATGCCCCA GAAGGGTTACCCCAGTTGATGGAAGTGGTCCGATCAAACTACGAAGCAATGATTGACCGTGCTCACGGAGGTCCCAATT TCATGATGCATTCTGGAATTTCCCAAGCCTCTGAGTATGATGATCCACCAGGTCTGAGGGAGAAGGCAGAATACCTGCT GAGGGAGTGGGTCAACCTCTACCATTCTGCTGCAGCGGGCCGCGACAGTACCAAAGCGTTCTCTGCGTTTGTTGGACAG ATGCACCAGCAAGGGATCCTGAAAACAGATGACCTGATCACCCGCTTTTTCCGGCTTTGCACTGAAATGTGTGTTGAAA TCAGCTATCGTGCTCAGGCTGAGCAACAGCACAACCCTGCTGCCAACCCCACGATGATCCGGGCCAAGTGCTACCACAA TCTGGATGCCTTTGTGCGGCTTATTGCACTGCTTGTGAAGCACTCTGGAGAAGCAACCAACACCGTTACGAAGATCAAC CTCCTGAACAAGGTTCTTGGTATTGTGGTGGGAGTTCTTCTGCAAGACCATGAAGTTCGGCAGGGTGAGTTTCAGCAGC TTCCTTACCATCGCATCTTCATCATGTTGCTGTTGGAATTAAATGCTCCTGAGCATGTGTTGGAGACCATCAACTTCCA GACGCTCACAGCTTTCTGTAACACATTTCACATCCTGAGGCCTACAAAAGCTCCAGGTTTTGTTTATGCCTGGCTGGAA CTGATCTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACACCACAGCAGAAGGGTTGGCCTATGTATGCCCAGT TACTGATCGATCTTTTCAAGTACTTGGCTCCTTTTCTCAGAAATGTGGAACTCACCAAACCTATGCAAATTCTTTACAA GGGCACTCTGCGTGTGTTGCTGGTCTTGTTGCATGATTTCCCAGAATTTCTTTGTGACTACCATTATGGGTTCTGCGAT GTCATCCCACCTAACTGTATTCAGTTAAGGAATTTGATCCTGAGTGCCTTCCCACGGAACATGAGGCTTCCAGACCCTT TCACCCCCAATCTGAAGGTGGACATGTTGAGTGAAATTAATATTGCTCCACGAATTCTCACCAATTTCACGGGAGTGAT GCCACCTCAGTTCAAGAAAGACTTGGATTCCTATCTCAAAACCCGATCTCCAGTCACTTTTTTGTCTGACTTGCGCAGC AACTTACAAGTATCAAATGAACCTGGCAACCGCTACAACATCCAGCTGATTAATGCCCTGGTGCTCTACGTAGGTACTC AGGCTATTGCGCACATCCACAACAAAGGCAGCACACCCTCCATGAGCACCATTACCCACTCAGCACACATGGACATCTT CCAGAATTTGGCAGTGGACCTGGACACCGAAGGTCGGTACCTCTTCCTGAATGCAATTGCCAATCAGCTGCGATACCCC AACAGTCATACCCACTACTTCAGCTGCACCATGCTTTACCTGTTTGCAGAGGCCAACACTGAGGCTATCCAGGAGCAGA TCACAAGGGTTCTCTTGGAACGACTGATTGTAAATAGGCCTCATCCCTGGGGTCTCCTCATTACTTTCATCGAGCTGAT AAAAAACCCAGCATTTAAGTTCTGGAACCATGAATTTGTTCACTGCGCTCCAGAAATTGAGAAGTTGTTCCAGTCGGTT GCACAGTGCTGCATGGGGCAGAAGCAAGCCCAGCAAGTAATGGAGGGGACTGGTGCCAGTTAGATGAGCTGCATCTTGT GTTGTAAATGTGCCAGCCTGGAGGCCCCTGTCCCATCGACCGACAGAAGCATCTGTAAGGCTCCTCCTGACCTTCCCAG CTCCCTCGATTGGGTACACGCAACCGACCTGGGGTGAAAGTCTGTGGGCACGTTCCAAAGTTTGAAACAAATTTGTGAC TTTTGGCCAAAATTCAGAAGATGCTGTGAATATCATTTTGAACTAGTGTAAATACAAGGAACAGAAACGTTTGTCTGGA CTTCTGGGTTTGTGCAAAGTGTGTAAAAGGCAAGTGGGTAACTGGTGCCTGTCCAGCTTGTAATAAAGGGGCAGCTGCT GATGCCAAGTGCTTGTCTGGGGCAGACCTCCTTGTCCTGACATTGCCAGACTCCCAAAGAATATTGAAAAGCCAGTTAT ATTATTATGTAACTTATTTTTTTCTTTATGTGGATGGGGGACCTTTAAATCACTAAGTTGTTTTACAGAAAAAGAAAAG TGGATATGTTTGGAATATGGGAATACTATGGAGTAAGGGAGGGGAGGGCGAGGGAGGGACTGAAGATTCAGCATTGTTT TCCCCTTTCCTCCCAGTGCTGACGGAGCCGTGTGGCAGTCAGAACGCCTCCTTTCTGTGGGAGAAGACACGCCTCAGGC CCTTTGGGAGAGGGTCAGCTGTTTTTAGTAAAGAAACCAGAGACCAGGCCTATAGCTTTT
Comments	Images Provided by Susan Chapman

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

1-3

stage 3

stage 3

Area Pellucida
Hensen's Node

4-6

stage 4

stage 5

stage 6

Head Process
Hensen's Node
Notochord

7-12

stage 7

stage 7

stage 8

stage 8

stage 9

stage 10

Head Process
Hensen's Node
Notochord

13-17

stage 17

Notochord
Pineal Gland

Data from NCBI Unigene EST Profile
Unigene ID: Gga.53936

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN

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