GEISHA - A Chicken Embryo Gene Expression Database
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COL10A1
collagen, type X, alpha 1

Gene
Official SymbolCOL10A1
Official Full Namecollagen, type X, alpha 1
CGNC ID64139
also known ascollagen alpha-1(X) chain|collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)|procollagen, type X, alpha 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_003641007
PolypeptideXP_003641055
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene100858979
Ensembl GeneENSGALG00000014965
KEGGgga:100858979

Entry 1

GEISHA IdCol10alpha1.Bendall.2003Data SourcePublication
Complete cDNA Template Probeshow
ATGCATTTACAAATATCGTTACTGCTGCTGTTTTGTCTAAACATTGTCCATGGCAGTGATGGATACTTTTCTGAGCGAT
ACCAGAAACAGTCCAGCATCAAGGGGCCACCACACTTTCTACCATTCAATGTAAAGAGTCAAGGTGTGCAGATGAGGGG
TGAACAAGGGCCCCCTGGTCCCCCAGGCCCTATTGGACCAAGAGGACAACCAGGTCCTGCAGGAAAACCTGGGTTTGGA
AGCCCTGGACCCCAAGGTCCCCCTGGTCCCCCAGGACCACCTGGATTCTCCACTGTTGGAAAACCAGGCATACCAGGTC
TACCAGGGAAGCCAGGAGAAAGAGGATTAAATGGTGAGAAAGGAGAAGCCGGACCCGTTGGGCTCCCAGGAGCAAGAGG
GCCACAAGGACCCCCTGGCATTCCTGGCCCTGCAGGACTGTCTGTCCCTGGAAAGCCAGGACCCCAAGGCCCTCCAGGA
GCTCAAGGGCCAAGAGGCCTCCCTGGTGAGAAAGGAGAACAAGGTGTTCCTGGTATAAATGGACAAAAAGGAGAAATGG
GATTTGGTGTTCCAGGCCGCCCAGGTAACAGGGGTCTTCCAGGCCCACAGGGACCCCAAGGCCTCCCTGGTCCTGCTGG
GATAGGGAAGCCTGGAGAAAATGGCCTTCCAGGTCAGCCAGGTATGAAAGGTGACAGAGGTCTACCAGGAGCACGTGGA
GAAGCTGGTATCCCAGGCCCCCAGGGTCCACCAGGAGAACCTGGAGAAGTTGGCATCGGCAAGCCTGGGCCAATGGGAC
CACCAGGACCAGCAGGCATCCCCGGAGCCAAAGGATTGCCTGGACCTGCAGGCCTGCCTGGATCCCCAGGTCTTCCAGG
ATTTGGAAAGCCAGGATTGCCAGGGATGAAGGGACACAGAGGACCTGAAGGACCTCCTGGCTTTCCAGGACCTAAAGGA
GACCAAGGCCCAGCTGGTGTACCAGGAGAACCAGGACCTGCTGGGCCACAAGGAAATATGGGCCCTCAAGGACTCAAAG
GCTTGCCTGGTGAGAATGGCTTACCCGGACCCAAAGGTGACATGGGCCCTGTAGGCCCTGCAGGATTCCCAGGAGCCAA
GGGTGAAAGAGGTCTACCAGGATTAGATGGTAAACCAGGATATCCAGGTGAGCAGGGTCTTCCTGGTCCTAAGGGACAT
CCAGGTCTCCCTGGTCAAAAAGGAGACACTGGCCATGCTGGCCCACCTGGCTTGCCTGGTCCAGTTGGACCACAAGGAG
TTAAGGGAGTTCCAGGTATTAATGGTGAACCAGGCCCAAGAGGACCTTCAGGAATACCTGGGATCAGAGGCCCCATTGG
TCCCCCTGGCATGCCAGGAGCCCCTGGTGCAAAAGGTGAGGCAGGAGCACCAGGACTGCCAGGCCCAGCAGGTATTGCT
ACAAAAGGTTTAAGAGGACCCATGGGACCACCTGGACCTCCTGGACCTAAAGGCAACAGCGGAGAGCCTGGCTTGCCAG
GTCCCCCCGGTCCTCCTGGTCCCCCTGGCCAATCCACAATCCCAGAAGGTTATGTTAAAGGAGAGTCTAGAGAACTATC
AGGAATGTCTTTCATGAAAGCAGGAGCAAATCAAGCTCTCACAGGAATGCCAGTGTCTGCCTTCACTGTCATTCTCTCA
AAAGCCTACCCTGGGGCAACAGTCCCCATCAAATTTGACAAAATCTTGTACAACAGACAGCAACACTATGATCCCAGGA
CAGGAATCTTTACCTGCAGGATCCCTGGACTATACTATTTCTCCTATCATGTACATGCAAAAGGAACAAATGTTTGGGT
TGCACTCTATAAAAATGGCTCCCCAGTCATGTACACTTATGATGAATACCAGAAAGGATACCTTGACCAGGCCTCAGGC
AGTGCTGTCATTGATCTCATGGAGAATGATCAAGTGTGGCTCCAGCTGCCAAATTCAGAATCCAATGGTCTCTATTCCT
CTGAATATGTTCATTCTTCTTTCTCAGGTTTCCTATTTGCTCAAATCTAA
CitationBendall AJ, Hu G, Levi G, Abate-Shen C. Dlx5 regulates chondrocyte differentiation at multiple stages. Int J Dev Biol. 2003 Jun;47(5):335-44.
Copyright"Reprinted from Int. J. Dev. Biol., 47, Bendall AJ, Hu G, Levi G, Dlx5 regulates chondrocyte differentiation at multiple stages, 335-44, Copyright (2003), with permission from Copyright © 2003 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from ensembl (ENSGALG00000014965).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 38
stage 44
Wing Bones
comparison with other genes

Entry 2

GEISHA IdCOL10A1.Domowicz.2009Data SourcePublication
Complete cDNA Template Probeshow
AAGCTTAGAAATACAACTTTGGAGACAATCTCTGAATACAATAACTGGTTGGAAATAATCTTCGGATTCATATACAACT
CTCAAATTAACATCTTAACTGATTCTAAGCTCTCTATTTGCACCTCAGTGAACAACTACTCACATAATCTCAGAGGAGT
ACTCCTGAAAGTAACACCTCGAAGTCGAAAATATGTAATTCTTTAGTTAAAACGTTCACAGAAAAATCCAAATGAAGCA
CCTAAAATTATAAACCTTACTTACAATTTTTTTCCATTTGTAACCTTTCTCATTTCTAAAAGCAGAAAGGATGCAAAAG
TTTAGAAAATACGAAACTACAGGCAATACAATTTTCATCAACAAGAAGAGGTCCAAGAGAAGAAGAAGAAATTAAAAGG
CTTAACAGGACCTAAAATCCTACCCAAAATAGCAACCCCCCATCCCTAAAACACACATATACACACAGATAATTACTGC
TTACTGTCTTGGGGAGGAGCTTATGTTCAGCAGTCACCAAACTAGGGTGAAAATCGTATAAATAGTCAAGGGTGACGCT
TGAAATCATCAGCTTCTGCTCACTCACCAGTGGCAGAAGAACTCCTCACCAGAGGAGGATTTGCCACTCTACTGCCTTG
CATTGGAGCTCCACAACATTTGGTATGTTATTGTTTCATTTCATTCTATATGGTTTTGATGCTAAAATCTATAGGGTGT
GTTTTCTGGTTGGGGTTGCAAGAGAGTTGATATTTAACGGCCAGCGACAGCCTCCTTACTGCTACTGGGGTTATTCAAA
AGGTTGCAAACAAAAACCTGGTTTCAGAGAAGGCAATGTGAGATTTTTGCCATGGATGCTGATGGAGCCAGAACTTTAT
ACTTCATGGAATTACGTGCATTAGACAGGGGCAATAACATCATGGTATAGAGCCTAGCATATTACCAATGAACCTTTCT
TCGGTTCCAGAGCTCTGATATATGTGACTCTGAACTTAGTTTTTGGGCGCTGGAGTAATTAGGAAAATTACTACTGTTT
CTGAAGTCAGTGGTTTTAAGTAGGCTGCCGCCTATTTAAAATGATTATTTTTCTAAAAGTGAGACTGCCTGCCTCTTAA
GCCATCTCTTATATCTTACATAGACATACAAGAACTCCAAATCTTTAGTTAGCAATGCTCATTCCATTCTCCTTACAGT
ACTTTTCACAGACAGCGAAAGTAGGAAAAAGGTAACAAGATAAAGAAACTTTTCATACCAACAGGTTAAGAAAACTGAG
TTATGCAAAAGACACTCATCAACTTCTACTCAATACAATGTTTTCTCCCCTTTCCAACAGAGGACGGATTTGGAAACAT
GCATTTACAAATATCGTTACTGCTGCTGTTTTGTCTAAACATTGTCCATGGCAGTGATGGATACTTTTCTGAGCGATAC
CAGAAACAGTCCAGCATCAAGGGGCCACCACACTTTCTACCATTCAATGTAAAGAGTCAAGGTAACGTCTACTATTTTT
TTTTTTTAATAAACTAATATAAAATAAGCTTCTAGTGGGTC
CitationDomowicz MS, Cortes M, Henry JG, Schwartz NB. Aggrecan modulation of growth plate morphogenesis. Dev Biol. 2009 May 15;329(2):242-57. Epub 2009 Mar 3.
CopyrightCopyright © 2009 Published by Elsevier Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # J04194.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-40
stage 33
stage 33
stage 33
stage 33
stage 33
stage 33
stage 34
stage 34
stage 38
stage 38
stage 38
stage 38
stage 40
stage 40
Leg Bones
Tibia
Tibia

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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