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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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BTBD6
BTB domain containing 6

Gene

Official Symbol	BTBD6
Official Full Name	BTB domain containing 6
CGNC ID
also known as	BTB/POZ domain-containing protein 6\|BTB (POZ) domain containing 6
gene type	unknown

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA
Polypeptide
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	101752037
Ensembl Gene
KEGG

Entry 1

GEISHA Id	BTBD6.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-CGAGTTTCCGCTGACAAAGAGG-3'
Reverse cDNA Template Primer	5'-ATTAACCCTCACTAAAGGGAGAGCATTCCTTCACTTATTGGG-3'	cDNA Template Length	642
Complete cDNA Template Probe	show CGAGTTTCCGCTGACAAAGAGGAAAGGACTGGTGCCGCAGCGCTGCCATCGCTTTCAGTCGTCTGCGTACCGCAGTAAC CAGTGGAGGTACCGGGGGCGGTGCGACAGTATTCAGTTTGCCGTAGACAAACGGATATTTATAGCGGGACTGGGATTGT ATGGGTCGAGTTGTGGCAAAGCTGAATACAGCGTCAAAATTGAACTGAAGCGCTTAGGAGTCGTCCTTGCTCAGAATCT GACAAAGTTTACCTCCGACGGCTCCAGTAATACCTTCTCGGTGTGGTTTGAGCACCCGGTGCAGGTTGAGCAGGACACG TTCTACAATGTAAGTGCCATTCTGGATGGCAATGAGCTCAGTTACTTCGGGCAGGAGGGAATGACTGAAGTGCAGTGCG GGAAAGTGACCTTCCAGTTCCAGTGCTCCTCGGACAGTACCAACGGGACTGGGGTACAAGGAGGACAAATCCCTGAGCT CATTTTCTATGCATGATGCATTTCACCTTGATTGTATTCCAGTACTGCAACGCTGCACATCTAAGGGATTCTTCAGTTT TGCTACAGAACTGTACAGCAGTATGGAATGTTACGCTACTTACCTATCTGCTACATCAGGCTATACCCAATAAGTGAAG GAATGCTCTC

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Area Opaca
Early Mesoderm
Epiblast
Headfold
Primitive Streak

7-12

stage 8

stage 9

stage 10

stage 11

Anterior Intestinal Portal
Early Embryo
Endoderm
Extraembryonic Blood Vessels
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Primitive Streak

19-24

stage 19

stage 20

Ear/Otic Placode
Eye
Foregut
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves

25-26

stage 25

stage 26

Cranial Ganglia
Duodenum
Ear/Otic Placode
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Lung
Mesencephalon
Mesonephros
Myotome
Pharyngeal Arches and Clefts
Rhombomeres
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	BTBD6.Alev.2010	Data Source	Publication
Complete cDNA Template Probe	show TGTGAGATCGACCTGCAGACGCTGGAGATCATCGTGACGCGGGAGGCCCTCAACACCAAGGAGGTGGTGGTGTTCGAGG CCGTTCTCAACTGGGCGGAGGCCGAGTGCAAGAGGCAGGGGCTGCCGGTGACGCCGCGCAACAAGAGGAACGTGCTGGG GAAGGCGCTGTACCTGGTGCGGATCCCCACGATGACTCTGGAAGAGTTCGCCAACGGGGCGGCCCAGTCCGACATCCTC ACGCTGGAGGAGACGCACAACATATTCCTGTGGTACACGGCCGCCAACAAACCCAAACTCGAGTTTCCGCTGACAAAGA GGAAAGGACTGGTGCCGCAGCGCTGCCATCGCTTTCAGTCGTCTGCGTACCGCAGTAACCAGTGGAGGTACCGGGGGCG GTGCGACAGTATTCAGTTTGCCGTAGACAAACGGATATTTATAGCGGGACTGGGATTGTATGGGTCGAGTTGTGGCAAA GCTGAATACAGCGTCAAAATTGAACTGAAGCGCTTAGGAGTCGTCCTTGCTCAGAATCTGACAAAGTTTACCTCCGACG GCTCCAGTAATACCTTCTCGGTGTGGTTTGAGCACCCGGTGCAGGTTGAGCAGGACACGTTCTACAATGTAAGTGCCAT TCTGGATGGCAATGAGCTCAGTTACTTCGGGCAGGAGGGAATGACTGAAGTGCAGTGCGGGAAAGTGACCTTCCAGTTC CAGTGCTCCTCGGACAGTACCAACGGGACTGGGGTACAAGGAGGACAA
Citation	Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28.
Copyright	Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng.
Comments	FORWARD PRIMER TGTGAGATCGACCTGCAGAC REVERSE PRIMER TTGTCCTCCTTGTACCCCAG